prot_H-paniculata_contig8613.16575.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8613.16575.1
Unique Nameprot_H-paniculata_contig8613.16575.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length315
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8613.16575.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 115..129
score: 31.88
coord: 34..49
score: 40.73
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 99..128
e-value: 1.6E-5
score: 34.3
coord: 66..95
e-value: 1.1
score: 18.3
coord: 33..64
e-value: 0.0012
score: 28.1
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 100..126
e-value: 2.1E-6
score: 27.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 99..131
score: 12.155
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 66..98
score: 9.11
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 33..65
score: 11.14
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 263..304
e-value: 2.5E-6
score: 27.2
NoneNo IPR availableGENE3D1.25.40.960coord: 105..142
e-value: 4.1E-7
score: 31.9
NoneNo IPR availablePANTHERPTHR24173FAMILY NOT NAMEDcoord: 71..137
coord: 4..159
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 260..314
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 246..311
e-value: 2.0E-6
score: 29.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..104
e-value: 2.1E-26
score: 94.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..143
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 4..92
e-value: 1.3E-11
score: 44.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..137
score: 34.058
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 279..288
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 264..302
score: 9.288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8613contigH-paniculata_contig8613:6057..9969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8613.16575.1mRNA_H-paniculata_contig8613.16575.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8613 4925..10211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8613.16575.1 ID=prot_H-paniculata_contig8613.16575.1|Name=mRNA_H-paniculata_contig8613.16575.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=315bp
MVDLHKLALDGNVEGVRKYLQKSSSKVGKANRDGQTALHCCAEGGHVEVC
RDLLTAGAFPDTEDKRGQTPLYVAVKNNKVGVATVLCEAGASTGRAGPRG
CTPLHIAASIGLVECAKVLLKHGAPIDNNPDQYGNTPEDSCIIADIRIFI
TTARRERAAAAAAAITECSYIAVSASAPPILDGEYKDGGIGPDEAYCENF
QQGKAGEGTMGPSSPYNPGIIPPSYNEIVSLSQYTSPEHGGGSDVVMSPM
SRARQAAELGVDRCSGCHVAERSRQLTPCYHVVCNNCARRCREDGEDRCP
TCLGQVFDDNLWIP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR013083Znf_RING/FYVE/PHD
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR017907Znf_RING_CS
IPR001841Znf_RING