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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 80.1 |
| Seed ortholog evalue | 2e-12 |
| Seed eggNOG ortholog | 2880.D7FZ90 |
| KEGG ko | ko:K15261 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | response to abiotic stimulus |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| EC | 2.4.2.30 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000 |
| Exons | 4 |
| Model size | 2319 |
| Cds size | 945 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8613.16575.1 >prot_H-paniculata_contig8613.16575.1 ID=prot_H-paniculata_contig8613.16575.1|Name=mRNA_H-paniculata_contig8613.16575.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=315bp
MVDLHKLALDGNVEGVRKYLQKSSSKVGKANRDGQTALHCCAEGGHVEVC
RDLLTAGAFPDTEDKRGQTPLYVAVKNNKVGVATVLCEAGASTGRAGPRG
CTPLHIAASIGLVECAKVLLKHGAPIDNNPDQYGNTPEDSCIIADIRIFI
TTARRERAAAAAAAITECSYIAVSASAPPILDGEYKDGGIGPDEAYCENF
QQGKAGEGTMGPSSPYNPGIIPPSYNEIVSLSQYTSPEHGGGSDVVMSPM
SRARQAAELGVDRCSGCHVAERSRQLTPCYHVVCNNCARRCREDGEDRCP
TCLGQVFDDNLWIP* back to topmRNA from alignment at H-paniculata_contig8613:4925..10211- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig8613.16575.1 ID=mRNA_H-paniculata_contig8613.16575.1|Name=mRNA_H-paniculata_contig8613.16575.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5287bp|location=Sequence derived from alignment at H-paniculata_contig8613:4925..10211- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTTGAACGTTTTTGAAACCGTTTTTCGAGACCCGATTTTGGATTGAAGA
CGCGATATATATGTGAGTGACGACTGACTCCGTGAGTGAGTGATGATGGG
ACATGCCTATGACGCAAGGACAAGCCACCGCTCCTCTTTTGAAAAAAATT
ACTGATGGGGTGTCTTTTTTGTTGATTGCAGACTTTCCTATTGTCTTAGC
TGAATAATAACAGGGAGGGGGGAAAAGGTAAATTCGAATCTCATGGTCGA
CCTGCACAAGCTCGCTTTGGACGGCAATGTCGAGGGGGTGCGCAAGTATC
TCCAGAAGTCGTCGTCGAAGGTCGGCAAGGCGAACCGGGATGGACAGACG
GCCCTACATTGTTGCGCTGAGGGGTAAGCTTGCATGATAGTGGATTGTGC
TGTAGCTCTATTGCCAACATACACACTATAAGAAATAAGTGGGGTTGCTT
CTTCGATGTGTATCCGATGAAATTCATGACGGCGAACGTGGATATTAGCC
AAATACACCGCAGATTGGGCGCATGTATTTCTGAGGGACGAACGAGGGCA
TGCTAAATAGTAGTTCCATCGTCCATGCAAGAGTTATGAGCAAGCTTATT
AGCCTTCTAAACGAGTACCCAGGTGCGCTACTACAACAGAGTCGCAGTTC
ACGACAATCACAGGTGAATCGACCAATGAGGAACGTCTTCTACCCCTCTG
GTGCCCAATGTGTGTACTGTACTGCTGTGTTGTACAAAGCGGTCATGTCG
AGGTTTGCCGAGATCTGCTGACCGCGGGCGCATTTCCGGACACCGAGGAC
AAAAGAGGCCAAACGCCTCTGTATGTGGCTGTGAAAAACAACAAGGTTGG
CGTGGCTACAGTCCTCTGCGAAGCGGGAGCCTCCACTGGTCGAGCGGGCC
CGCGTGGATGCACACCTCTCCACATCGCCGCCAGCATCGGGCTTGTCGAG
TGCGCCAAGGTGCTTCTAAAGCATGGCGCTCCTATCGACAACAACCCTGA
TCAGTAAGGTTTCTTTCATTCCGTTCCTTGATGGTAAATAGTGCAGCTCC
CCGATACGTCTCGGTACTTCAGTGATATCTACAGTACGGTTTCTAACGTG
CAGTTTATATGCTGAGGTTTCCTTTAAAAAACTCAAGGTGATGATAATAC
CTCATCCGATTGAGGTATACTAAAACAGTATAAATAGTGGGGTCACGCCT
CCGCCCCTGCAATCTGTGCTTCGTCCTCGACCCAGGCACGGCGGTCTCGA
ATGCGTTCGCACGCAAAGATTATTTTTTCACGATTTACTTGATCATAGAG
TTTCAAATATTCTAAAACGACGCCAACGACGACTTTATCTTGTTAAGCAA
GTAGCATATATATATAGAATCAGAATGGTAAGTTGGCCTGCAAGTATCGG
CCACGCGGTTTTACTTGTTTGTCCTATCCGCTGTGTTGCGACTTCTACCT
ACTATGCTTCTGGGTGGACAAATTTTATTCTGGTGTGCATATCGCGTGTC
AGAGGTAGTAGTAGTGACGGCACTGAACGTTCAGTGCGGACTGTTTAGCT
CAGTCGTTATTTCTACGCCCAACAAGAGCTTATGCAGATAGCGCAGTTGA
TTCTATCATCCTAAATATTTGGCTGTGTGTAGGAGTCAAATATCGCCCTT
TTAGTCATTGAAGCAGCATGCAGCTAAAAGGCTATCCCCTTTGACACATA
ACCTGCGTTGAGAATGGTGGAACATGACTCAAGGGACGGCATCGAAATCC
TTCGGGGAACCTCTTCATTTGGTGCCTACGAGATATTTAGTCCGCACGTC
TACTAAACTCTACTTATGTTCCTAACTGATGTATGATAGCGCGGAATAGA
CGAAAGCCAGCATCACTCAAAAGAAGCAACATTTTTTAGAGGCATGGGAT
GCTTCGTGCCTCCTCCCGCGATCTGGCGCGCGGTGTTGTGTCTCAAGTTC
TTTGATCTTGATCGGAGCGGTAAATGACCAGAAGAGTTTGACACTGACTG
CAAGTTGGACTAAGATCGAAATTCAAATTTCGAATGATGCGAGATAAATT
TTGTCGTATATGAACGCTTGTTTGCACCCTCACAGGTCCGGTATCACGTA
CGGACGGGCTTGTGCTTGACAAGCAACAAATATCTTAATCGCGAATTCCA
ACACAAAATTATAGCAGACAATCACGACAAAACCTCCTTGTCTTCTCTAT
ACCACACACCCACTGCGAAAGAACGCCGTTCCTGTGATTCATCAGATAAT
ACATACGGTATATGAAGAAAAGGGTGATTGATCCCATACGCAAAATGCAA
TACACGAATGATTCGAATGACGGGGAAAACCATCATAAACAGCATTTTTT
ACAAGAATTGCATCCTCCGGACATATGCGAATAAGTGACGTCTTCTCCAC
GAAAATGAGAAAGTATTCGCCTGAGTTTCAGAATGAGAAGACACATAGAA
TCAACTGCCCGTCCTTATCCATTCGATTTACGAGCATTTTTAGAAGCCAT
GGATGGTCCGGGGCACATGGAATACACGAGCTCATTCTGAAACTCAGGCG
AATACTTCTTCATTTTCGTGGAGAATTAGCCAATTATTCGTATTTTGTTC
GGGGAGTGAAGAATTGACAACATGTTGTGTTTATTTGCAAAATACCGCGT
TTACGGGGCTAGAGATAACCATTTTCCCCGGGCCAACTTGTCGAGAAGAA
CTGTGAGTTTAAGAGGGGCGCACGTGCCAATCCCTAGCCTGTAAACCCAA
CACGATAGCTTCGTTTGCTCACCCAGAGACGGAGGTCCGTTTGCAGTGGT
GTTGGGCACCGGCCAGAACAATACCAGATATCCCGTCTGTCTTCAACTGA
TATTTTGGGAAACGCGATAAACGGGCAATCGATTTCCCAGCAGGTGTCCA
ACTCTACTCTATCACCCCCCCCATGATGCCCGAAATGCGATGGTGTATTG
ATCCATCCCAAGACACCCGACCCTACCCTTCGATGACTCTTCTATTCTCT
AAACTCGATTTACACGTACCGTTGGGGCAATGTAGGTATGGCAACACCCC
AGAGGATTCCTGCATAATTGCCGACATACGCATATTCATCACCACGGCAC
GCCGAGAGCGAGCCGCAGCTGCCGCAGCCGCTATCACCGAATGTAGCTAC
ATTGCGGTATCGGCGTCCGCACCTCCAATCTTAGACGGAGAGTATAAGGA
CGGAGGAATAGGACCGGATGAAGCCTATTGCGAGAATTTTCAGCAGGGAA
AGGCGGGGGAGGGAACAATGGGTCCTAGCTCACCATACAATCCCGGAATA
ATTCCACCGTCATGTAAGGGAATTGGAAAAAATCGTCCTGCACCGGCAGA
TTCGGTTCTATACAATGGTCGTCGTCATGGTCGTCGTCGTCGTTGTTGTT
GGTGGTGTCGTCGTCGTCGTCGTTTGGATCGCTCTGAAACGTATTGGGTA
TTTAATCCTCGTCGGCTTCCTGATCCGAGAAGTCTTGTCTGTTTTTGCAC
CAGCATGGAATCATCACCTCCTTGTGGTGGCTCGTGCTGCCGCCCTAGTT
TGGTCGTTTTGTGGATAAACAATTCAGAAGACGTGAAAGGACTGAATATG
CCTCCGATCGGTTTGGTTGACAGCTATTGTCATGTTTCCTAGTGTACACA
ATTTTCAGTCTACTTGCTATTCTATTGCCCCTCCCCTTCCCCTCGAAATC
TTGCGCTTGGACCTGTAGTATTCTCCATGCCTTGCTCTCTACTAGTAGCG
TGCTTGCTGTCTTTTGGTGCAGCGCACGTTTAGAATTTTCGTTCAGAGCT
ACTACACATGGTCAAGATGACTCTGAAAGCACGATGCTCTTGCACCCCCC
CCCCCCCTCCCCTCCTGCTGTGCATCGGAGCAGACAATGAGATTGTCAGC
CTTTCACAGTACACGTCCCCGGAACACGGAGGGGGGTCGGATGTCGTCAT
GTCGCCAATGTCTAGGGCACGCCAAGCCGCGGAGCTCGGCGTGGATCGTT
GCTCAGGTTGCCATGTCGCCGAGCGCTCGCGGCAACTAACGCCCTGCTAC
CATGTCGTGTGCAACAACTGTGCCCGTCGCTGCAGGGAGGATGGAGAGGA
TCGTTGTCCCACCTGCCTTGGACAGGTTTTCGATGATAACCTTTGGATTC
CGTGATGTGTGTGTGCCGTAGTGCGGGGCAGGCTGCAGGAGGAGGAAAGC
GGCGGCAGGCTTCGGCTGTCAGATGATATGCACGAGTTAGTGGCAATTCC
CAAGTCTCATACCTGAGAGACGTTAACTGGATGATGTTCGTGTTTTTTCT
TTAAATTATTCTTTTGTCGGTTGTAGGAATGAATGCTACTAGCTGGTGTA
CTGCAATGATAGGAGGAGCCAATAATGATTTTTCTCTCTGTGACTTTTCG
TTCTAGCATGGATCAAAGGGCCCATCGATTACTCACTTTATACAGTTAGC
GCTGAGAAAGAGGTAAGATGCATAAATAAACGACAAGTGGGTTTCGTGAA
GCGTAAGACCAGTTTAGACAATGCTTTCATATGTGCAGATGTAATTCTAC
GTGCCACGTCAGACGTAACCTGCACGGATATGGTGTTGCGTCAATTCTTC
AGTGACTTTTCATGCCATGGAGGAGGTGGGGAACCGGTGACCGCCCCGCG
CAAACACCTATTTACGAGCCACTAGGAACCGATTGAATCGTCTTCTGCCC
TGGGAATTGCCAACTAATGTAGTAAGCAATATGTGCGTACGTATGTCAAC
TCTGAGATCATAACAAATGTAGGATGGAATAATACTAGCTATTCGTAGAT
ATTATTATGCTGGCGTTATGTACCCTGCACCCTCCGGTCATGGCTACAAT
AGATATTTTCAGCATCAAATTTGGAATAACTACAAGCGGGGGGGAATGGG
CGCAGGCGGGTTGTGATACGCTCGACGACGCAACGTATATTCCTCCTTGG
TGCCCGCACAAAAAAAATGTTGGACGCATATGTATGGGTAGTAATTCGAC
GGGGCATGTTCATCACTGTTGTTGTACGGAATTTTTTGCCATTATTACCG
CGGCTTGTGAAGATGGGGAGGGCGTGAGAAATTGCGTAAGTATACGGTCG
GAAAACTTTTCAGTTCCTGCAGGTTATCTGCCAATTACATAAAATAGGTG
TTTTTCTTGATTGATCACCCTTTTTCTTCTTGCTCTTACAGGGTACCCCA
ACCAAGGCGCCCAAAACAATCAAGATTATGACAGGTACATACGTACGTCT
AAGTACGCGCCGACAGCAATAATAATAACAGTCAGCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig8613:4925..10211- >mRNA_H-paniculata_contig8613.16575.1 ID=mRNA_H-paniculata_contig8613.16575.1|Name=mRNA_H-paniculata_contig8613.16575.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1890bp|location=Sequence derived from alignment at H-paniculata_contig8613:4925..10211- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCGACCTGCACAAGCTCGCTTTGGACGGCAATGTCGAGGGGGTGCG
CAAGTATCTCCAGAAGTCGTCGTCGAAGGTCGGCAAGGCGAACCGGGATG
GACAGACGGCCCTACATTGTTGCGCTGAGGGATGGTCGACCTGCACAAGC
TCGCTTTGGACGGCAATGTCGAGGGGGTGCGCAAGTATCTCCAGAAGTCG
TCGTCGAAGGTCGGCAAGGCGAACCGGGATGGACAGACGGCCCTACATTG
TTGCGCTGAGGGCGGTCATGTCGAGGTTTGCCGAGATCTGCTGACCGCGG
GCGCATTTCCGGACACCGAGGACAAAAGAGGCCAAACGCCTCTGTATGTG
GCTGTGAAAAACAACAAGGTTGGCGTGGCTACAGTCCTCTGCGAAGCGGG
AGCCTCCACTGGTCGAGCGGGCCCGCGTGGATGCACACCTCTCCACATCG
CCGCCAGCATCGGGCTTGTCGAGTGCGCCAAGGTGCTTCTAAAGCATGGC
GCTCCTATCGACAACAACCCTGATCACGGTCATGTCGAGGTTTGCCGAGA
TCTGCTGACCGCGGGCGCATTTCCGGACACCGAGGACAAAAGAGGCCAAA
CGCCTCTGTATGTGGCTGTGAAAAACAACAAGGTTGGCGTGGCTACAGTC
CTCTGCGAAGCGGGAGCCTCCACTGGTCGAGCGGGCCCGCGTGGATGCAC
ACCTCTCCACATCGCCGCCAGCATCGGGCTTGTCGAGTGCGCCAAGGTGC
TTCTAAAGCATGGCGCTCCTATCGACAACAACCCTGATCAGTATGGCAAC
ACCCCAGAGGATTCCTGCATAATTGCCGACATACGCATATTCATCACCAC
GGCACGCCGAGAGCGAGCCGCAGCTGCCGCAGCCGCTATCACCGAATGTA
GCTACATTGCGGTATCGGCGTCCGCACCTCCAATCTTAGACGGAGAGTAT
AAGGACGGAGGAATAGGACCGGATGAAGCCTATTGCGAGAATTTTCAGCA
GGGAAAGGCGGGGGAGGGAACAATGGGTCCTAGCTCACCATACAATCCCG
GAATAATTCCACCGTCATGTATGGCAACACCCCAGAGGATTCCTGCATAA
TTGCCGACATACGCATATTCATCACCACGGCACGCCGAGAGCGAGCCGCA
GCTGCCGCAGCCGCTATCACCGAATGTAGCTACATTGCGGTATCGGCGTC
CGCACCTCCAATCTTAGACGGAGAGTATAAGGACGGAGGAATAGGACCGG
ATGAAGCCTATTGCGAGAATTTTCAGCAGGGAAAGGCGGGGGAGGGAACA
ATGGGTCCTAGCTCACCATACAATCCCGGAATAATTCCACCGTCATACAA
TGAGATTGTCAGCCTTTCACAGTACACGTCCCCGGAACACGGAGGGGGGT
CGGATGTCGTCATGTCGCCAATGTCTAGGGCACGCCAAGCCGCGGAGCTC
GGCGTGGATCGTTGCTCAGGTTGCCATGTCGCCGAGCGCTCGCGGCAACT
AACGCCCTGCTACCATGTCGTGTGCAACAACTGTGCCCGTCGCTGCAGGG
AGGATGGAGAGGATCGTTGTCCCACCTGCCTTGGACAGGTTTTCGATGAT
AACCTTTGGATTCCGTGAACAATGAGATTGTCAGCCTTTCACAGTACACG
TCCCCGGAACACGGAGGGGGGTCGGATGTCGTCATGTCGCCAATGTCTAG
GGCACGCCAAGCCGCGGAGCTCGGCGTGGATCGTTGCTCAGGTTGCCATG
TCGCCGAGCGCTCGCGGCAACTAACGCCCTGCTACCATGTCGTGTGCAAC
AACTGTGCCCGTCGCTGCAGGGAGGATGGAGAGGATCGTTGTCCCACCTG
CCTTGGACAGGTTTTCGATGATAACCTTTGGATTCCGTGA back to top
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