prot_H-paniculata_contig8602.16566.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8602.16566.1
Unique Nameprot_H-paniculata_contig8602.16566.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length133
Homology
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BLAST of mRNA_H-paniculata_contig8602.16566.1 vs. uniprot
Match: A0A6H5KC60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC60_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 4.520e-15
Identity = 45/107 (42.06%), Postives = 66/107 (61.68%), Query Frame = 0 
Query:   26 VRPLTLAGAS-NSSALVNACRTENITIHDGVPLAAGSAAMTDGSLSTKFAAKLVVVSIAGDKTLLNPSTSTHARLNKLFQSVKDSLHPRGTVAIMVPHPWHLHAGRI 131
            VRP  L G S N + L++ CR EN T+HD VPL    + +    LS + A KLV+VSI  ++ LL  S +T+  L ++  +V+  +HP GT+A++VPHPW  H  R+
Sbjct:  363 VRPSLLGGPSGNEAVLMDKCRDENATLHDTVPLDPTGSDVD--KLSFRNAPKLVIVSIGAEQRLLKTSEATNTHLRRVIDNVRGRMHPDGTIALVVPHPWSAHFHRL 467
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BLAST of mRNA_H-paniculata_contig8602.16566.1 vs. uniprot
Match: A0A6H5LBJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBJ9_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 9.450e-15
Identity = 45/107 (42.06%), Postives = 66/107 (61.68%), Query Frame = 0 
Query:   26 VRPLTLAGAS-NSSALVNACRTENITIHDGVPLAAGSAAMTDGSLSTKFAAKLVVVSIAGDKTLLNPSTSTHARLNKLFQSVKDSLHPRGTVAIMVPHPWHLHAGRI 131
            VRP  L G S N + L++ CR EN T+HD VPL    + +    LS + A KLV+VSI  ++ LL  S +T+  L ++  +V+  +HP GT+A++VPHPW  H  R+
Sbjct:  305 VRPSLLGGPSGNEAVLMDKCRDENTTLHDIVPLDPTGSDVD--KLSFRNAPKLVIVSIGAEQRLLRTSEATNTHLRRVIDNVRGRMHPDGTIALVVPHPWSAHFHRL 409
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8602.16566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KC60_9PHAE4.520e-1542.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LBJ9_9PHAE9.450e-1542.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8602contigH-paniculata_contig8602:1929..2660 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8602.16566.1mRNA_H-paniculata_contig8602.16566.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8602 1928..2660 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8602.16566.1 ID=prot_H-paniculata_contig8602.16566.1|Name=mRNA_H-paniculata_contig8602.16566.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp
RRRLATVHSSEQPVKKKARKTTSATVRPLTLAGASNSSALVNACRTENIT
IHDGVPLAAGSAAMTDGSLSTKFAAKLVVVSIAGDKTLLNPSTSTHARLN
KLFQSVKDSLHPRGTVAIMVPHPWHLHAGRIHS
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