prot_H-paniculata_contig8559.16532.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8559.16532.1
Unique Nameprot_H-paniculata_contig8559.16532.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length344
Homology
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BLAST of mRNA_H-paniculata_contig8559.16532.1 vs. uniprot
Match: D8LEM5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEM5_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 5.670e-14
Identity = 47/68 (69.12%), Postives = 52/68 (76.47%), Query Frame = 0 
Query:   25 MAPPLLDDGVDGGRQKNSRKIKRLRDVSCMQKRETRQDKWGRQRGGRKARWDKLDGHPSTLKSSRLRS 92
            M P L +DG    ++KNSRKIKRLRD SCM+ RET QD+WGRQRGGRKARWDK D  PS  KS RLRS
Sbjct:    1 MPPTLAEDGQQ--QRKNSRKIKRLRDASCMRTRETAQDRWGRQRGGRKARWDKWDRQPSAFKS-RLRS 65
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8559.16532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEM5_ECTSI5.670e-1469.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8559contigH-paniculata_contig8559:2213..8346 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8559.16532.1mRNA_H-paniculata_contig8559.16532.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8559 2212..8346 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8559.16532.1 ID=prot_H-paniculata_contig8559.16532.1|Name=mRNA_H-paniculata_contig8559.16532.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=344bp
RRRGICVTDQQAVGFTTVLDVTHQMAPPLLDDGVDGGRQKNSRKIKRLRD
VSCMQKRETRQDKWGRQRGGRKARWDKLDGHPSTLKSSRLRSTVGRASTH
DFHLEETLLAAAAAAAAASPSNGHISGRGNDVVAAVDSDGDAEEEQDAGI
RDSLSLSTNSKNSNLGELHNGNSRDEGGGVGVAIMSTPSPNKRGLSSSTS
CFYSPPPFGQIQQRIIEDDILLTSSDSSDDEGSSTPGRAASTAVTAATVA
CPTILSRISPAKTSPNGSSVGSSSRQDFVGGGFISPTGRQHGLHTATGGR
TISGGASGSRGREQRPGGLGSGGGVRGGGSGRRYALRSSPSAAS
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