prot_H-paniculata_contig8540.16515.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig8540.16515.1
Unique Name	prot_H-paniculata_contig8540.16515.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	107

Homology

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BLAST of mRNA_H-paniculata_contig8540.16515.1 vs. uniprot
Match: D8LQA2_ECTSI (Cationic amino acid transporter-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQA2_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 1.490e-49
Identity = 90/107 (84.11%), Postives = 97/107 (90.65%), Query Frame = 0

Query:    1 RPLSVVLTEAQQDKLVRHLTLFDLVIIGVARTMGSGIFALVGLIGSTYAGPGAIVSWVLAGICCVVSGLSYAELSSIIPSEGGAYAYAFVALGELPATITAWCLTLE 107
            +PL+VVL EA  D LVRHLTLFDLV+IGVA T+GSGIFA+VGLIGSTYAGP A+VSWVLAGI CV SGLSYAELSSIIPSEGG YAYAFVALGELPA +TAWCLTLE
Sbjct:   32 KPLAVVLMEASNDPLVRHLTLFDLVVIGVAGTVGSGIFAIVGLIGSTYAGPAAVVSWVLAGIGCVFSGLSYAELSSIIPSEGGTYAYAFVALGELPAIVTAWCLTLE 138

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BLAST of mRNA_H-paniculata_contig8540.16515.1 vs. uniprot
Match: A0A7R9UE61_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE61_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.830e-33
Identity = 62/107 (57.94%), Postives = 81/107 (75.70%), Query Frame = 0

Query:    1 RPLSVVLTEAQQDKLVRHLTLFDLVIIGVARTMGSGIFALVGLIGSTYAGPGAIVSWVLAGICCVVSGLSYAELSSIIPSEGGAYAYAFVALGELPATITAWCLTLE 107
            +PL+VV  E +  KL RHL+LFDL+ IG+  T+GSG+F L GLI   YAGP  ++SW+ AG  CV+SG++YAE+SS +PS G +YAY +VALGELPA +  WCLTLE
Sbjct:   34 KPLAVVEAEERGSKLGRHLSLFDLLCIGIGGTVGSGVFVLCGLIAHEYAGPAVVLSWLTAGFGCVLSGMNYAEMSSRVPSAGSSYAYTYVALGELPAVVAGWCLTLE 140

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BLAST of mRNA_H-paniculata_contig8540.16515.1 vs. uniprot
Match: A0A835ZA89_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA89_9STRA)

HSP 1 Score: 122 bits (306), Expect = 3.750e-30
Identity = 58/107 (54.21%), Postives = 81/107 (75.70%), Query Frame = 0

Query:    1 RPLSVVLTEAQQDKLVRHLTLFDLVIIGVARTMGSGIFALVGLIGSTYAGPGAIVSWVLAGICCVVSGLSYAELSSIIPSEGGAYAYAFVALGELPATITAWCLTLE 107
            +PL V+  E    +L R L L+DLV IG+  T+GSG+F + GLIG   AGP  + SW++AG+ C++SG+++AE+SS++PS G AYAYA+VALGELPA + AWCL+LE
Sbjct:   41 KPLRVIHAEESCQELERTLGLWDLVAIGIGGTIGSGVFVMCGLIGGEVAGPAGVFSWLVAGLGCLLSGVAFAEMSSLVPSAGSAYAYAYVALGELPAVVIAWCLSLE 147

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BLAST of mRNA_H-paniculata_contig8540.16515.1 vs. uniprot
Match: A0A2P4XYY0_9STRA (Amino Acid-Polyamine-Organocation (APC) Family (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XYY0_9STRA)

HSP 1 Score: 115 bits (287), Expect = 6.450e-30
Identity = 57/107 (53.27%), Postives = 76/107 (71.03%), Query Frame = 0

Query:    1 RPLSVVLTEAQQDKLVRHLTLFDLVIIGVARTMGSGIFALVGLIGSTYAGPGAIVSWVLAGICCVVSGLSYAELSSIIPSEGGAYAYAFVALGELPATITAWCLTLE 107
            +PL+V+  E   ++L R L+LFDLV IGV  T+GSG+F+  G I S  AGP A +SW++AG+ C ++ L+Y EL + +PS G  YAY+F ALGELPA I AW LTLE
Sbjct:   15 KPLAVIKVEEAAEELPRQLSLFDLVCIGVGGTVGSGVFSTTGEIISGTAGPAAFISWIIAGVVCCINALAYMELVTRVPSSGSTYAYSFYALGELPAVIAAWLLTLE 121

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BLAST of mRNA_H-paniculata_contig8540.16515.1 vs. uniprot
Match: A0A7S2Q307_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q307_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.970e-29
Identity = 60/91 (65.93%), Postives = 71/91 (78.02%), Query Frame = 0

Query:   17 RHLTLFDLVIIGVARTMGSGIFALVGLIGSTYAGPGAIVSWVLAGICCVVSGLSYAELSSIIPSEGGAYAYAFVALGELPATITAWCLTLE 107
            RHL+LFDLV IGV  T+GSGIF L GLI  +YAGP   +SW+++GI  ++SG  YAELS  IPS G +YAYAFVALGELPA ITA+ LTLE
Sbjct:   88 RHLSLFDLVSIGVGGTIGSGIFVLNGLIAHSYAGPATFISWIVSGIAALLSGCCYAELSGRIPSAGSSYAYAFVALGELPAFITAFMLTLE 178

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BLAST of mRNA_H-paniculata_contig8540.16515.1 vs. uniprot
Match: A0A1V9YWK7_9STRA (Amino Acid-Polyamine-Organocation (APC) Family n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YWK7_9STRA)

HSP 1 Score: 118 bits (296), Expect = 5.980e-29
Identity = 56/107 (52.34%), Postives = 79/107 (73.83%), Query Frame = 0

Query:    1 RPLSVVLTEAQQDKLVRHLTLFDLVIIGVARTMGSGIFALVGLIGSTYAGPGAIVSWVLAGICCVVSGLSYAELSSIIPSEGGAYAYAFVALGELPATITAWCLTLE 107
            +P+ V+  E ++++L R L L DL++IG+  T+GSG+FA  G I S+ AGP A +SWV+AG+ C++SG +Y E+SSIIPS G  YAY++  LGELPA + AW LTLE
Sbjct:   11 KPMEVIHAEERKEELPRELGLIDLILIGIGGTVGSGVFATTGDIISSAAGPAAFLSWVIAGVSCIISGFAYMEMSSIIPSSGSTYAYSYHILGELPAVVAAWLLTLE 117

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BLAST of mRNA_H-paniculata_contig8540.16515.1 vs. uniprot
Match: A0A662X6M4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X6M4_9STRA)

HSP 1 Score: 114 bits (285), Expect = 8.340e-29
Identity = 57/107 (53.27%), Postives = 75/107 (70.09%), Query Frame = 0

Query:    1 RPLSVVLTEAQQDKLVRHLTLFDLVIIGVARTMGSGIFALVGLIGSTYAGPGAIVSWVLAGICCVVSGLSYAELSSIIPSEGGAYAYAFVALGELPATITAWCLTLE 107
            +PLSV+  E   + L R L+LFDL+ IG+  T+GSG+F+  G I S  AGP A VSWV+AG+ C ++ L+Y EL + +PS G  YAY+F ALGELPA + AW LTLE
Sbjct:   15 KPLSVIHAEEAAEDLPRQLSLFDLICIGIGGTVGSGVFSTTGDIISGTAGPAAFVSWVIAGVVCCINALAYMELVTRVPSSGSTYAYSFYALGELPAVVAAWLLTLE 121

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BLAST of mRNA_H-paniculata_contig8540.16515.1 vs. uniprot
Match: A0A3F2RJM4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJM4_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.620e-28
Identity = 57/107 (53.27%), Postives = 78/107 (72.90%), Query Frame = 0

Query:    1 RPLSVVLTEAQQDKLVRHLTLFDLVIIGVARTMGSGIFALVGLIGSTYAGPGAIVSWVLAGICCVVSGLSYAELSSIIPSEGGAYAYAFVALGELPATITAWCLTLE 107
            +P+SV+  E   ++L RHL+LFDL+ IG+  T+GSG+F+  G I ST AGP A VSW++AG+ C ++ L+Y EL + IPS G  YAYA+ A+GELPA + AW LTLE
Sbjct:    8 KPMSVINAEEVAEELPRHLSLFDLLCIGIGSTVGSGVFSTSGEIISTTAGPAAFVSWIIAGLVCCINALAYMELVTCIPSSGSTYAYAYHAMGELPAVVAAWLLTLE 114

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BLAST of mRNA_H-paniculata_contig8540.16515.1 vs. uniprot
Match: A0A3R7JQT9_9STRA (AA_permease_C domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JQT9_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.760e-28
Identity = 57/107 (53.27%), Postives = 78/107 (72.90%), Query Frame = 0

Query:    1 RPLSVVLTEAQQDKLVRHLTLFDLVIIGVARTMGSGIFALVGLIGSTYAGPGAIVSWVLAGICCVVSGLSYAELSSIIPSEGGAYAYAFVALGELPATITAWCLTLE 107
            +P+SV+  E   ++L RHL+LFDL+ IG+  T+GSG+F+  G I ST AGP A VSW++AG+ C ++ L+Y EL + IPS G  YAYA+ A+GELPA + AW LTLE
Sbjct:    8 KPMSVIHAEEVAEELPRHLSLFDLLCIGIGSTVGSGVFSTSGEIISTTAGPAAFVSWIIAGLVCCINALAYMELVTRIPSSGSTYAYAYHAMGELPAVVAAWLLTLE 114

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BLAST of mRNA_H-paniculata_contig8540.16515.1 vs. uniprot
Match: A0A6G0X249_9STRA (AA_permease_C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X249_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.180e-28
Identity = 59/111 (53.15%), Postives = 79/111 (71.17%), Query Frame = 0

Query:    1 RPLSVVLTEAQQDKLVRHLTLFDLVIIGVARTMGSGIFALVGLIGSTYAG----PGAIVSWVLAGICCVVSGLSYAELSSIIPSEGGAYAYAFVALGELPATITAWCLTLE 107
            +P+ V+L E ++++LVR L L+DL+ IG+  T+GSG+FA  G I S  AG    P A +SW +AGICC+VSG +Y E+SSIIPS G  YAY +  LGELPA + +W LTLE
Sbjct:   11 KPIEVILAEEKKEELVRELGLWDLIAIGIGGTVGSGVFATTGDIISGAAGGGAGPAAFLSWTIAGICCIVSGFAYMEMSSIIPSSGSTYAYVYHVLGELPAFVASWLLTLE 121

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig8540.16515.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig8540.16515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LQA2_ECTSI	1.490e-49	84.11	Cationic amino acid transporter-like protein n=2 T...	[more]
A0A7R9UE61_9STRA	2.830e-33	57.94	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A835ZA89_9STRA	3.750e-30	54.21	Amino acid permease-domain-containing protein n=1 ...	[more]
A0A2P4XYY0_9STRA	6.450e-30	53.27	Amino Acid-Polyamine-Organocation (APC) Family (Fr...	[more]
A0A7S2Q307_9STRA	1.970e-29	65.93	Hypothetical protein (Fragment) n=1 Tax=Skeletonem...	[more]
A0A1V9YWK7_9STRA	5.980e-29	52.34	Amino Acid-Polyamine-Organocation (APC) Family n=1...	[more]
A0A662X6M4_9STRA	8.340e-29	53.27	Uncharacterized protein (Fragment) n=1 Tax=Nothoph...	[more]
A0A3F2RJM4_9STRA	1.620e-28	53.27	Uncharacterized protein n=2 Tax=Phytophthora kerno...	[more]
A0A3R7JQT9_9STRA	1.760e-28	53.27	AA_permease_C domain-containing protein n=2 Tax=Ph...	[more]
A0A6G0X249_9STRA	2.180e-28	53.15	AA_permease_C domain-containing protein n=1 Tax=Ap...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1740.10		coord: 14..107 e-value: 9.2E-27 score: 95.8
None	No IPR available	PANTHER	PTHR43243:SF4	CATIONIC AMINO ACID TRANSPORTER 4	coord: 10..107
None	No IPR available	PANTHER	PTHR43243	FAMILY NOT NAMED	coord: 10..107
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 49..53
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..48
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 105..107
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 73..83
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 84..104
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 54..72
None	No IPR available	TMHMM	TMhelix		coord: 82..104
None	No IPR available	TMHMM	TMhelix		coord: 53..75
None	No IPR available	TMHMM	TMhelix		coord: 21..43
IPR002293	Amino acid/polyamine transporter I	PFAM	PF13520	AA_permease_2	coord: 19..105 e-value: 4.1E-12 score: 45.6

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig8540	contig	H-paniculata_contig8540:341..2029 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig8540.16515.1	mRNA_H-paniculata_contig8540.16515.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig8540 341..2029 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig8540.16515.1 ID=prot_H-paniculata_contig8540.16515.1|Name=mRNA_H-paniculata_contig8540.16515.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp
RPLSVVLTEAQQDKLVRHLTLFDLVIIGVARTMGSGIFALVGLIGSTYAG
PGAIVSWVLAGICCVVSGLSYAELSSIIPSEGGAYAYAFVALGELPATIT
AWCLTLE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002293	AA/rel_permease1