prot_H-paniculata_contig8534.16506.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8534.16506.1
Unique Nameprot_H-paniculata_contig8534.16506.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length275
Homology
BLAST of mRNA_H-paniculata_contig8534.16506.1 vs. uniprot
Match: A0A6H5JSJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSJ9_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 6.660e-96
Identity = 162/277 (58.48%), Postives = 201/277 (72.56%), Query Frame = 0
Query:    2 SGAVVLTASKDGTCRLWDWRRNSQAAVLATTSGLPYSVH---APQVMCRACCFAPNRPNLIYSVQSASRGKAYVTEWKFRIGQENSASAGGDGAIECNVEPSKVKCVSPHPVTTLSVRGDGTRLAVGNVEGTVLVYRLPGFAKVMEYPAHDLPVTGLAFAPQAAGTALRGFDLLAGSADYKITLFKSQGSAVKLAGAQVLGAVWWLIVTTVTVIFWILRTIVSVVMTVIPLIGLCAIGAAVFYYPTNLYDVLAITLGLDATEE--GSWEDTDRGPVI 273
            SGA++LTASKDGTCRLWD  R S+AA+L TTSGLP +     AP +MCR+CCF+P+RP+ I+SVQS  RG AYVTEW++ +  ++ A  GG G + C V+P KV  VSPHP T+LSVR DG RLAVGNVEGTVLVYRLPGFAKVMEYPAHDLPVTGL FA +  G AL G+DLLAGSADYKI+LFKSQGSA KLA  Q++  +W L+V     I W++RT +++ +TVIP++GL A+  AV Y P  L   + + +   A EE  G   D D  P +
Sbjct:  205 SGALMLTASKDGTCRLWDCERGSEAALLPTTSGLPPTASIAKAPVIMCRSCCFSPDRPDAIFSVQSEGRGNAYVTEWRYSVRPDDDAP-GGRG-VACEVKPVKVSLVSPHPATSLSVRSDGARLAVGNVEGTVLVYRLPGFAKVMEYPAHDLPVTGLGFATREVGAALGGYDLLAGSADYKISLFKSQGSATKLALRQMMVLLWSLVVFVFKAISWLVRTALTLTLTVIPMMGLVALVLAVVYRPEELAAAVRVLI---AQEENLGLEADPDSEPPV 476          
BLAST of mRNA_H-paniculata_contig8534.16506.1 vs. uniprot
Match: D7G743_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G743_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 1.020e-81
Identity = 132/195 (67.69%), Postives = 154/195 (78.97%), Query Frame = 0
Query:    2 SGAVVLTASKDGTCRLWDWRRNSQAAVLATTSGLP---YSVHAPQVMCRACCFAPNRPNLIYSVQSASRGKAYVTEWKFRIGQENSASAGGDGAIECNVEPSKVKCVSPHPVTTLSVRGDGTRLAVGNVEGTVLVYRLPGFAKVMEYPAHDLPVTGLAFAPQAAGTALRGFDLLAGSADYKITLFKSQGSAVKLA 193
            SGA+VLTASKDGTCRLWD  R S+AA+L TTSGLP    +  AP +MCR+CCF+P++P+ I+SVQS  RG AYVTEW++ +  ++ A  GG G + C V+P KV  VSPHP T+LSVR DG RLAVGNVEGTVLVYRLPGFAKVMEYPAHDLPVTGL FA +  G AL G+DLLAGSADYKI+LFKSQG    LA
Sbjct:  205 SGALVLTASKDGTCRLWDCERGSEAALLPTTSGLPPTASTAKAPVIMCRSCCFSPDKPDAIFSVQSGGRGNAYVTEWRYSVRPDDDAP-GGRG-VACEVKPVKVSLVSPHPATSLSVRSDGARLAVGNVEGTVLVYRLPGFAKVMEYPAHDLPVTGLGFASREVGAALGGYDLLAGSADYKISLFKSQGDKPVLA 397          
BLAST of mRNA_H-paniculata_contig8534.16506.1 vs. uniprot
Match: A0A7S2AI78_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI78_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.230e-21
Identity = 66/188 (35.11%), Postives = 92/188 (48.94%), Query Frame = 0
Query:    2 SGAVVLTASKDGTCRLWDWRRNSQAAVLATTSGLPYSVHAPQ---VMCRACCFAPNRPNLIYSVQSASRGKAYVTEWKFRIGQENSASAGGDGAIECNVEPSKVKCVSPHPVTTLSVRGDGTRLAVGNVEGTVLVYRLPGFAKVMEYPAHDLPVTGLAFAPQAA-GTALRGFDLLAGSADYKITLFKS 185
            SG  V +ASKDGTCR+WD  +      L    G+P ++       VMCR C F+P+    +++VQ A RG +YVT W     + N    G              K  +  P+  L++R DG   A G+V G ++++       +   P H L VTGL+F P A+ G A   FDLL GSAD  + L  S
Sbjct:  199 SGLRVCSASKDGTCRIWDAVKGDCLHELPAADGIPATIVKKMTYNVMCRVCAFSPDGAK-VFTVQGACRGDSYVTRWDLTDDKVNLEKVG--------------KLSTGTPIKCLAIRSDGLFAAAGDVTGNIVLFDTASLKTIKSEPLHQLTVTGLSFRPSASEGDA---FDLLTGSADKTVMLASS 368          
BLAST of mRNA_H-paniculata_contig8534.16506.1 vs. uniprot
Match: A0A7S2EE33_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EE33_TRICV)

HSP 1 Score: 92.0 bits (227), Expect = 2.210e-18
Identity = 73/217 (33.64%), Postives = 104/217 (47.93%), Query Frame = 0
Query:    3 GAVVLTASKDGTCRLWDWRRNSQAAVLATT------SGLPYSVHA------PQ-VMCRACCFAPNRPNLIYSVQSASRGKAYVTEWKF-RIGQ-ENSASAGGDGAIECNVEPS-------KVKCVSPHPVTTLSVRGDGTRLAVGNVEGTVLVYRLPGFAKVMEYP-AHDLPVTGLAFAPQAAGTALRG-------FDLLAGSADYKITLFKSQGSA 189
            GA VL+++KDGT RLWD R   Q   L  +       G P    A      PQ ++ R C F       +Y+V S  +GKAY+ +W   R G+ +     G DG +   V P        +V C S  P+++LS+ GD + LA+G V+GTV ++ +        +P  HDLPVT +A  P  +  AL G       FD  + SAD +I +   Q  A
Sbjct:   31 GAAVLSSAKDGTARLWDARSGEQLHELKCSVDPINRDGTPAPKPAQKKNARPQKILVRGCAFGDLEGKRVYTVASGRKGKAYLAKWSLVRAGKAQPPPQPGPDGKMPPFVPPPMVFREDRRVSC-SDVPISSLSLSGDASILALGGVDGTVTLFDVEVMKPAKSFPEVHDLPVTCVAARPVPSNMALPGDEDAGVLFDCASASADNRIAMLTRQRRA 246          
BLAST of mRNA_H-paniculata_contig8534.16506.1 vs. uniprot
Match: B8CFV5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFV5_THAPS)

HSP 1 Score: 85.9 bits (211), Expect = 2.870e-15
Identity = 64/218 (29.36%), Postives = 101/218 (46.33%), Query Frame = 0
Query:    3 GAVVLTASKDGTCRLWDWRRNSQAAVLAT-----TSGLPYSVHA----------------PQVMCRACCFAPNRPNLIYSVQSASRGKAYVTEWKFRI----GQENSASAGGDGAIECNVEPS--------KVKCVSPHPVTTLSVRGDGTRLAVGNVEGTVLVYRLPGFAKVMEYPAHDLPVTGLAFAPQAAGTALRG-------FDLLAGSADYKI 180
            G  VL+++KDGT R++      +  V+           P  + A                PQ++ R C +       IY++ S  RG AY+T+W+  +       N+A  GG  A   N   +        +V+C SP P++  ++  DGT LA+G+VEG+VL+Y L   + + ++  HDLPVT LA  P      L G       FD ++ SAD ++
Sbjct:  249 GMQVLSSAKDGTARVFCTESGVELGVMTCEVHDPNGPPPLKIDANAAAGKTKDPRMMKRPPQILVRGCAYGDLEGKTIYTIASGKRGAAYLTKWRTLVPLNSAPPNTAGGGGGPASATNPTTANMSFRQEYRVQC-SPVPISATALSSDGTLLALGSVEGSVLLYNLEKQSVMKQFEGHDLPVTCLAARPIPNVLMLPGELEGGVNFDAVSASADNRL 465          
BLAST of mRNA_H-paniculata_contig8534.16506.1 vs. uniprot
Match: A0A6T5VQI7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A6T5VQI7_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 4.810e-14
Identity = 58/183 (31.69%), Postives = 89/183 (48.63%), Query Frame = 0
Query:    5 VVLTASKDGTCRLWDWRRNSQAAVLATTSGL-PYSVHAPQVMCRACCFAPNRPNLIYSVQSASRGKAYVTEWKFRIGQENSASAGGDGAIECNVEPSKVKCVSPHPVTTLSVRGDGTRLAVGNVEGTVLVYRLPGFAKVMEYPAHDLPVTGLAFAPQAAGTALRGFDLLAGS--ADYKITLFK 184
            +V+++SKDG+C+LW+         +     L   S     + CR  CF+ +  +L YS+QS  RG  Y+ +    I ++NS S      +  +++  KV  VS  P T L      + LA+G+ +G+++V       KV     HDLPVTGL FAP          D +  S  ADYK+T  +
Sbjct:  120 IVVSSSKDGSCKLWNIDNGELINEIPNARNLMKKSDPKLSIECRGSCFSIDGLHL-YSIQSGKRGSTYLFDRLITIQRDNSTSK-----LTVDIKVLKVIEVSRVPCTKLKTNDKTSHLAIGSSDGSIVVVTTSNLKKVYSKQFHDLPVTGLGFAPIILADE-EEVDCIVNSCSADYKLTTIR 295          
BLAST of mRNA_H-paniculata_contig8534.16506.1 vs. uniprot
Match: A0A1E7FWW6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWW6_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.110e-12
Identity = 56/205 (27.32%), Postives = 98/205 (47.80%), Query Frame = 0
Query:    5 VVLTASKDGTCRLWDWRRNSQAAVLATT----SGLPYSVHAPQVMCRACCFAPNRPNLIYSVQSASRGKAYVTEWKFRIGQENSASAGGDGAIECNVEPSKVKCVSPHPVTTLSVRGDGTRLAVGNVEGTVLVYRLPGFAKVMEY-PAHDLPVTGLAFAP-----QAAGTALRGFDLLAGSADYKITLFKSQGSAVKLAGAQVLG 199
            +++++SKDGT R+W  +R+    VL  T     G P       ++ R C F      ++Y+V S  RG A++++W F   +            EC     +  C S HPV+ +S+  D T LA+GN EG+VL++ +  +  +  +   HD PVT +A  P     +    ++  F+ ++ SAD ++    +Q    K   ++  G
Sbjct:    1 MIVSSSKDGTARVW--KRDECIGVLKCTVTDPRGPPPKKPQKFIVVRGCAFGDLEGKVVYTVASGKRGSAFLSKWAFDETKNQ---------FECF---DRTVC-SDHPVSAMSMSSDATALALGNSEGSVLLFNILKWKPIKTFLNVHDFPVTCIAARPYEVPLKGEDKSMIRFNAVSASADAQLARLTTQRRVPKSGSSRSAG 190          
BLAST of mRNA_H-paniculata_contig8534.16506.1 vs. uniprot
Match: A0A7S1V1F6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V1F6_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.920e-12
Identity = 59/196 (30.10%), Postives = 99/196 (50.51%), Query Frame = 0
Query:    5 VVLTASKDGTCRLWDWRRNSQAAVL--------ATTSGLPY--SVHAPQVMCRACCFAPNRPNLIYSVQSASRGKAYVTEWKFRIGQENSASAGGDGAIECNVEPSKVKCVSPHPVTTLSVRGDGTRLAVGNVEGTVLVYRLPGFAKVMEYP-AHDLPVTGLAFAPQAAGTALRG-------FDLLAGSADYKITL 182
            ++L+++KDGT RLW  R+    AVL        A  S  P   S   PQ++ R C F      ++++V S  +GKA++T W   +GQ  S   G D   +      +   +   P++ +++ GDG  LA+G V G+++++    + K+  +P  H+LPVT +A  P    T L+G       F  ++ SAD ++ L
Sbjct:   41 LILSSAKDGTARLW--RKGQSNAVLKCDITDPTARKSKAPKRRSTRPPQILVRGCAFGDLEGKVVFTVASGRKGKAFLTRW---MGQGPS---GSDYICQ------ERTAIHDFPISAMNLSGDGALLALGAVNGSIILFDAQKWKKLRVWPEVHELPVTCIAARPYP--TPLQGEEEDGIQFHAISCSADSQMAL 220          
BLAST of mRNA_H-paniculata_contig8534.16506.1 vs. uniprot
Match: A0A7S2UEI3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEI3_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 5.500e-9
Identity = 60/233 (25.75%), Postives = 105/233 (45.06%), Query Frame = 0
Query:    6 VLTASKDGTCRLWDWRRNSQAAVLATTSGLPYSV-------------HAP---------QVMCRACCFAPNRPNLIYSVQSASRGKAYVTEWKFRI-----GQENSASAGGDGAIECNVEPSKVKCVSPHPVTTLSVRGDGTRLAVGNVEGTVLVYRL----PGFAKVMEYPAHDLPVTGLAFAP-----------QAAGTALRGFDLLAGSADYKITLFKSQGSAVKLAGAQ 196
            +L+++KDGT R+WD    +++   + ++  P                 AP         QV+ R C +      +IY+V S  R  A++T+WK  +     G   S     +G         KV C +P PV+++S+ GD + +A+G V+GT+ ++ L    P   K  E   H+LPVT +A  P           +  G +++ +D+++ SAD ++     Q +  K    Q
Sbjct:  135 ILSSAKDGTARIWDANLQTKSLQASVSNATPLQALCVLNCPPPEEPKGAPPKRGKKGPQQVLVRGCAYGDLEGKVIYTVSSGRRSVAHLTKWKQLVPLAFKGSSTSPPLQYNGTH-------KVVC-APCPVSSMSLSGDASFVALGRVDGTISLFGLTKESPELWKQFE-TIHELPVTCVAARPVPLPLPGEVSEEYCGASIQ-YDVMSASADNQLAHLSRQRAPRKRRSTQ 357          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8534.16506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JSJ9_9PHAE6.660e-9658.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G743_ECTSI1.020e-8167.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2AI78_9STRA1.230e-2135.11Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2EE33_TRICV2.210e-1833.64Hypothetical protein (Fragment) n=2 Tax=Trieres ch... [more]
B8CFV5_THAPS2.870e-1529.36Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A6T5VQI7_9STRA4.810e-1431.69Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A1E7FWW6_9STRA1.110e-1227.32Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S1V1F6_9STRA1.920e-1230.10Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2UEI3_9STRA5.500e-925.75Hypothetical protein n=1 Tax=Attheya septentrional... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..188
e-value: 2.2E-21
score: 78.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 3..19
e-value: 0.082
score: 13.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..28
score: 9.807
NoneNo IPR availablePANTHERPTHR23284PROLACTIN REGULATORY ELEMENT BINDING PROTEINcoord: 2..215
NoneNo IPR availablePANTHERPTHR23284:SF0PROLACTIN REGULATORY ELEMENT-BINDING PROTEINcoord: 2..215
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 217..221
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..191
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 243..274
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 222..242
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..216
NoneNo IPR availableTMHMMTMhelixcoord: 219..241
NoneNo IPR availableTMHMMTMhelixcoord: 192..214
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..28
score: 9.599
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8534contigH-paniculata_contig8534:274..8572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8534.16506.1mRNA_H-paniculata_contig8534.16506.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8534 178..9577 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8534.16506.1 ID=prot_H-paniculata_contig8534.16506.1|Name=mRNA_H-paniculata_contig8534.16506.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp
MSGAVVLTASKDGTCRLWDWRRNSQAAVLATTSGLPYSVHAPQVMCRACC
FAPNRPNLIYSVQSASRGKAYVTEWKFRIGQENSASAGGDGAIECNVEPS
KVKCVSPHPVTTLSVRGDGTRLAVGNVEGTVLVYRLPGFAKVMEYPAHDL
PVTGLAFAPQAAGTALRGFDLLAGSADYKITLFKSQGSAVKLAGAQVLGA
VWWLIVTTVTVIFWILRTIVSVVMTVIPLIGLCAIGAAVFYYPTNLYDVL
AITLGLDATEEGSWEDTDRGPVIA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf