prot_H-paniculata_contig8523.16494.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8523.16494.1
Unique Nameprot_H-paniculata_contig8523.16494.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length95
Homology
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BLAST of mRNA_H-paniculata_contig8523.16494.1 vs. uniprot
Match: D7FKF3_ECTSI (HSCB_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF3_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 5.010e-31
Identity = 66/94 (70.21%), Postives = 74/94 (78.72%), Query Frame = 0 
Query:    1 MRLLGSSALEEESAAEDGPLVPPAFLMKVMESREQLEHCSSTEEAEAILKQTRAASDQCLKTMDVALKAGGGKDELADAAVRLRYFYRIEDEAR 94
            MRLLGS+ALEEE   +D   VP  FLM+VME+RE LE CSS EEAEAIL +T  A ++CL  MD  LKAGGGKDEL+DAAVRLRY YRIEDEAR
Sbjct:  207 MRLLGSTALEEEGE-DDRTSVPMDFLMEVMETREALEGCSSKEEAEAILSETSVAVEECLSGMDEVLKAGGGKDELSDAAVRLRYLYRIEDEAR 299
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8523.16494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKF3_ECTSI5.010e-3170.21HSCB_C domain-containing protein n=2 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036386HscB, C-terminal domain superfamilyGENE3D1.20.1280.20coord: 15..95
e-value: 1.3E-16
score: 62.4
IPR036386HscB, C-terminal domain superfamilySUPERFAMILY47144HSC20 (HSCB), C-terminal oligomerisation domaincoord: 14..94
IPR009073Co-chaperone HscB, C-terminal oligomerisation domainPFAMPF07743HSCB_Ccoord: 22..93
e-value: 5.1E-16
score: 58.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8523contigH-paniculata_contig8523:248..532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8523.16494.1mRNA_H-paniculata_contig8523.16494.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8523 248..532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8523.16494.1 ID=prot_H-paniculata_contig8523.16494.1|Name=mRNA_H-paniculata_contig8523.16494.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp
MRLLGSSALEEESAAEDGPLVPPAFLMKVMESREQLEHCSSTEEAEAILK
QTRAASDQCLKTMDVALKAGGGKDELADAAVRLRYFYRIEDEARD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036386HscB_C_sf
IPR009073HscB_oligo_C