prot_H-paniculata_contig8521.16493.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8521.16493.1
Unique Nameprot_H-paniculata_contig8521.16493.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length74
Homology
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: A0A067T6Q3_GALM3 (Uncharacterized protein (Fragment) n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T6Q3_GALM3)

HSP 1 Score: 65.1 bits (157), Expect = 1.440e-10
Identity = 29/69 (42.03%), Postives = 47/69 (68.12%), Query Frame = 0
Query:    5 PESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA 73
            P +  EAL SP A +W+ AM+EE+ +L+K GTW+   +G LPA + AI ++ +F++K  E G+V ++ A
Sbjct:  859 PNTPEEALASPEAKEWKDAMDEEYNILLKMGTWK---MGDLPADRKAIGSRWVFRKKKDEHGTVIKFKA 924          
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: UPI000B8B61AD (uncharacterized protein LOC110778732 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8B61AD)

HSP 1 Score: 62.0 bits (149), Expect = 1.520e-10
Identity = 34/73 (46.58%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    1 MKEDPESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA 73
            + EDP+S  EA++S  A  W+  +  E   ++ N TWE   L  LP G   I  K IFKRKLK DGSV R+NA
Sbjct:   17 VDEDPKSYEEAMSSFDASFWKEEINSELESIMANQTWE---LVELPKGGKVIGCKWIFKRKLKTDGSVERFNA 86          
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: A0A1Y1IGG8_KLENI (Integrase catalytic domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IGG8_KLENI)

HSP 1 Score: 64.3 bits (155), Expect = 2.670e-10
Identity = 34/70 (48.57%), Postives = 42/70 (60.00%), Query Frame = 0
Query:    4 DPESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA 73
            +P+S  EALNSP A  WR AM+EE+G L +N TWE   L   P+G   I  K  FK K  E+G + RY A
Sbjct:  560 EPKSLGEALNSPEAELWRKAMDEEFGSLQENQTWE---LAEPPSGVKPIPCKWAFKLKRDENGQINRYKA 626          
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: A0A8N4KWV3_BACDO (uncharacterized protein LOC115065929 n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A8N4KWV3_BACDO)

HSP 1 Score: 60.8 bits (146), Expect = 9.600e-10
Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 0
Query:    5 PESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA 73
            P+S  EALN  +A  WRA+M++E+ VLVKN TW   +   LP+ + AI  K +F  K   DG V R+ +
Sbjct:   65 PQSVNEALNDDYAKHWRASMQKEYDVLVKNKTWSFVE---LPSNEKAINCKWVFNIKRNADGCVERFKS 130          
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: A0A6L2MZV1_TANCI (Integrase catalytic domain-containing protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2MZV1_TANCI)

HSP 1 Score: 62.4 bits (150), Expect = 1.270e-9
Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 0
Query:    1 MKEDPESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA 73
            +KEDP +  EA+ S     W+ A+++E G ++KN TW   D   LP G   +  KCIFK+K+K DG++ ++ A
Sbjct:  347 VKEDPRTYNEAMQSWDNAFWKEAIDDEIGSIMKNNTWVLSD---LPPGCKHLGCKCIFKKKMKVDGTIDKFKA 416          
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: A5C0K0_VITVI (CCHC-type domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5C0K0_VITVI)

HSP 1 Score: 60.8 bits (146), Expect = 4.380e-9
Identity = 33/73 (45.21%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    1 MKEDPESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA 73
            + EDP+S  EA+ SP A  W+ A+  E   ++ N T E  D   LP G   I  K IFKRKLK+DGS+ +Y A
Sbjct:  215 IDEDPKSYKEAITSPDAPFWKEAINSEIESIMYNHTCELVD---LPPGAKTIGFKWIFKRKLKQDGSIEKYKA 284          
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: UPI00090160D7 (uncharacterized protein LOC109135961 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00090160D7)

HSP 1 Score: 58.5 bits (140), Expect = 7.150e-9
Identity = 28/69 (40.58%), Postives = 40/69 (57.97%), Query Frame = 0
Query:    5 PESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA 73
            P++  +ALN P+   W AAM +E+G L+K GTW   DL   P G N +    +FK K K +G + R+ A
Sbjct:   53 PKNPKQALNDPN---WNAAMRDEFGALIKTGTW---DLVPRPTGVNIVNCMWLFKHKFKSNGDLERHKA 115          
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: A0A151QXM4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QXM4_CAJCA)

HSP 1 Score: 55.5 bits (132), Expect = 2.310e-8
Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 0
Query:   19 KWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA 73
            KWR  M+EE+G + +N TWE   L  LP G   I  K ++K+K+  +G V RY A
Sbjct:    3 KWRTTMDEEFGAIERNKTWE---LTNLPEGARPIGVKWVYKKKMNAEGEVERYKA 54          
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: Q259D6_ORYSA (H0801D08.16 protein n=1 Tax=Oryza sativa TaxID=4530 RepID=Q259D6_ORYSA)

HSP 1 Score: 58.5 bits (140), Expect = 2.910e-8
Identity = 27/73 (36.99%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    1 MKEDPESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA 73
            + + P+S +EA  SP A  W+ A+  E   ++ NGTWE  +    P G   +  K +FK+KL+ DG++ +YNA
Sbjct:  599 VDDTPKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTE---RPYGCKPVGCKRVFKKKLRPDGTIEKYNA 668          
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: A0A4V1RYA3_FUSOX (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Fusarium oxysporum TaxID=5507 RepID=A0A4V1RYA3_FUSOX)

HSP 1 Score: 57.8 bits (138), Expect = 5.290e-8
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    4 DPESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA 73
            +PE+ AEA+NSPH+ +W  AM +E   L +NGT+   +   LP G++ ++ K ++K K  +DG + R+ A
Sbjct:  339 EPETFAEAMNSPHSEQWMHAMIDEIDSLTRNGTFIPVN---LPPGKHTLQGKWVYKLKRGKDGEITRFKA 405          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067T6Q3_GALM31.440e-1042.03Uncharacterized protein (Fragment) n=1 Tax=Galerin... [more]
UPI000B8B61AD1.520e-1046.58uncharacterized protein LOC110778732 n=1 Tax=Spina... [more]
A0A1Y1IGG8_KLENI2.670e-1048.57Integrase catalytic domain-containing protein n=1 ... [more]
A0A8N4KWV3_BACDO9.600e-1043.48uncharacterized protein LOC115065929 n=1 Tax=Bactr... [more]
A0A6L2MZV1_TANCI1.270e-939.73Integrase catalytic domain-containing protein n=1 ... [more]
A5C0K0_VITVI4.380e-945.21CCHC-type domain-containing protein n=1 Tax=Vitis ... [more]
UPI00090160D77.150e-940.58uncharacterized protein LOC109135961 n=1 Tax=Beta ... [more]
A0A151QXM4_CAJCA2.310e-843.64Retrovirus-related Pol polyprotein from transposon... [more]
Q259D6_ORYSA2.910e-836.99H0801D08.16 protein n=1 Tax=Oryza sativa TaxID=453... [more]
A0A4V1RYA3_FUSOX5.290e-838.57Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF264coord: 3..73
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8521contigH-paniculata_contig8521:529..750 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8521.16493.1mRNA_H-paniculata_contig8521.16493.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8521 514..1101 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8521.16493.1 ID=prot_H-paniculata_contig8521.16493.1|Name=mRNA_H-paniculata_contig8521.16493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp
MKEDPESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQN
AIRTKCIFKRKLKEDGSVARYNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like