mRNA_H-paniculata_contig8521.16493.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: A0A4Z0ABW0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0ABW0_9AGAM) HSP 1 Score: 108 bits (269), Expect = 9.150e-24 Identity = 68/188 (36.17%), Postives = 93/188 (49.47%), Query Frame = 1
Query: 43 EALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA*LVAQGFSHVEGEDFFETSPP*LAC*PYVLFLA------WLTSIISN*NAWT*TRRI*TPP*KKSCLFSYTPQFSSFSRDMSFARRLRKSMYDPEQSGRNWNNSLDEFLVGIGLQRSTTDSCLY 588
E + P KW +AM+EE+ VL+K GTWE LPAG AI ++ +K K DG+ RY A LVAQGFS G DF ET P + L A WL + +A+ +F + P+ ++ RL KS+Y +QSGR WN LD L+ IG ++S +D C+Y
Sbjct: 999 EVVQGPDQEKWESAMQEEYDVLLKTGTWEKV---RLPAGCKAIGSRWTYKVKHDADGNPVRYRARLVAQGFSQRPGVDFNETHSPVARFESFRLVFALVARFGWLFEQVDVKSAYLNGTL-------DEEIFMHQPEGFISPDEIDLVLRLLKSIYGLKQSGRVWNKVLDGELLNIGFKQSNSDPCVY 1176
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: J9KJ72_ACYPI (Integrase catalytic domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KJ72_ACYPI) HSP 1 Score: 100 bits (248), Expect = 5.950e-21 Identity = 62/193 (32.12%), Postives = 97/193 (50.26%), Query Frame = 1
Query: 28 PESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA*LVAQGFSHVEGEDFFETSPP*LAC*PYVLFLA------WLTSIISN*NAWT*TRRI*TPP*KKSCLFSYTPQFSSFSRDMSFARRLRKSMYDPEQSGRNWNNSLDEFLVGIGLQRSTTDSCLY 588
P++ + A+ HA W+ A+++E L KN TW L LP G+ + TK +FK K GSV +Y A LVAQGFS EG D+++T P LA W + A+ I T ++ P+ +++ DM F +L KS+Y +Q+ + W+ D ++ +GL++S +D CLY
Sbjct: 771 PKTYSSAVTGVHANLWKNAIQDEIDSLKKNNTWT---LSHLPKGRKVVGTKWVFKIKRDSIGSVKKYKARLVAQGFSQKEGVDYYDTYSPVAKLTTLRTLLAIAVQRNWFLQQLDVKTAFL--YGILTED-----IYIEQPEGLNYNSDMIF--KLNKSLYGLKQASKCWHERFDNYIAKLGLEQSDSDQCLY 951
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: A0A0A9W6P7_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9W6P7_LYGHE) HSP 1 Score: 99.0 bits (245), Expect = 1.480e-20 Identity = 65/196 (33.16%), Postives = 97/196 (49.49%), Query Frame = 1
Query: 19 KEDPESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA*LVAQGFSHVEGEDFFETSPP*LAC*PYVLFLA------WLTSIISN*NAWT*TRRI*TPP*KKSCLFSYTPQFSSFSRDMSFARRLRKSMYDPEQSGRNWNNSLDEFLVGIGLQRSTTDSCLY 588
K++P++ +A++ P W+ A+EEE L WE D LP G++AI K +FK K DGSV RY A LVAQGF+ G D+ ET P ++ LFL WL + A+ K ++ P+ RL KS+Y +QSGR W +L+ L+ G+++S ++SC+Y
Sbjct: 666 KKEPKTFKQAMDGPDHKLWKEAVEEELTSLKNMNVWELTD---LPPGKSAIGCKWVFKIKYLADGSVERYKARLVAQGFTQEYGVDYNETYSPVVSLPTIRLFLKLAVENNWLVHQMDVKTAYLNGEL-------KEEIYMRLPEGIITEESEKKVCRLLKSLYGLKQSGRAWYETLERKLLEGGMKKSKSESCIY 851
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: A0A034V2Y7_BACDO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034V2Y7_BACDO) HSP 1 Score: 97.8 bits (242), Expect = 1.650e-20 Identity = 62/200 (31.00%), Postives = 101/200 (50.50%), Query Frame = 1
Query: 13 DMKEDPESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA*LVAQGFSHVEGEDFFETSPP*LAC*PYVLFLAWLT--------SIISN*NAWT*TRRI*TPP*KKSCLFSYTPQFSSFSRDMSFARRLRKSMYDPEQSGRNWNNSLDEFLVGIGLQRSTTDSCLY 588
D E P++ AEAL S +A W+A+M+ E+ L+ N TWE D LP G +I +K +F+ K DG + ++ + LVA+G G ++ ET P + + A + ISN A+ ++ ++ PQ ++ + +L K++Y +QSGR WN +LDE L IG ++S ++CLY
Sbjct: 172 DDVETPQTVAEALQSQYATNWQASMQSEYNALIANNTWELVD---LPTGAKSIGSKWVFRIKRNRDGEIKKFKSRLVAKGCGQQLGINYSETFSPVIRYETIRMLFAIAAEKQLYMHQADISN--AYLNSKL-------DEVVYMQQPQNFVSAKHPNKVLKLNKAIYGLKQSGRVWNQTLDEVLQNIGFKQSKHEACLY 359
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: B6V6Z8_DROME (Polyprotein n=1 Tax=Drosophila melanogaster TaxID=7227 RepID=B6V6Z8_DROME) HSP 1 Score: 97.8 bits (242), Expect = 3.780e-20 Identity = 60/195 (30.77%), Postives = 98/195 (50.26%), Query Frame = 1
Query: 22 EDPESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA*LVAQGFSHVEGEDFFETSPP*LAC*PYVLFLAWLTSI------ISN*NAWT*TRRI*TPP*KKSCLFSYTPQFSSFSRDMSFARRLRKSMYDPEQSGRNWNNSLDEFLVGIGLQRSTTDSCLY 588
E P+ +AL HA W+ +M++E+ LV N TW D LP GQ AI +K +F+ K ++G++ ++ + LVAQG G ++ ET P + + A + NA+ R + ++ PQ + + +L+K++Y +QSGR WN++LDE L IG +RS ++CLY
Sbjct: 807 ETPQCVGDALRGEHAQDWKTSMQKEYDALVSNNTWTLCD---LPPGQKAIGSKWVFRVKRDKEGNIQKFKSRLVAQGCGQKMGVNYSETFSPVIRYETIRMLFAIAAEKQLCMHQVDISNAYLNGRL-------QEEVYMRQPQNFIDEKHPNKVLKLQKAIYGLKQSGRVWNDTLDEVLKSIGFKRSKNEACLY 991
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: A0A0K8W4G0_BACLA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Bactrocera latifrons TaxID=174628 RepID=A0A0K8W4G0_BACLA) HSP 1 Score: 97.8 bits (242), Expect = 3.780e-20 Identity = 62/200 (31.00%), Postives = 101/200 (50.50%), Query Frame = 1
Query: 13 DMKEDPESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA*LVAQGFSHVEGEDFFETSPP*LAC*PYVLFLAWLT--------SIISN*NAWT*TRRI*TPP*KKSCLFSYTPQFSSFSRDMSFARRLRKSMYDPEQSGRNWNNSLDEFLVGIGLQRSTTDSCLY 588
D E P++ AEAL S +A W+A+M+ E+ L+ N TWE D LP G +I +K +F+ K DG + ++ + LVA+G G ++ ET P + + A + ISN A+ ++ ++ PQ ++ + +L K++Y +QSGR WN +LDE L IG ++S ++CLY
Sbjct: 813 DDVETPQTVAEALQSQYATNWQASMQSEYNALIANNTWELVD---LPTGAKSIGSKWVFRVKRNRDGEIEKFKSRLVAKGCGQQLGINYSETFSPVIRYETIRMLFAIAAEKQLYMHQADISN--AYLNSKL-------DEVVYMQQPQNFVSAKHPNKVLKLNKAIYGLKQSGRVWNQTLDEVLQNIGFKQSKHEACLY 1000
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 96.7 bits (239), Expect = 9.540e-20 Identity = 60/188 (31.91%), Postives = 96/188 (51.06%), Query Frame = 1
Query: 25 DPESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA*LVAQGFSHVEGEDFFETSPP*LAC*PYVLFLAWLTSIISN*NAWT*TRRI*TPP*KKSCLFSYTPQFSSFSRDMSFARRLRKSMYDPEQSGRNWNNSLDEFLVGIGLQRSTTDSCLY 588
+P + +EA ++ + +W+ A + E+ L++NGTWE L P +N + ++ +FK K K DGSV ++ A LVAQG+S EG D+ E P + LA L +I+ R ++ P+ + +L+KS+Y +QS R WN++LD FL G ++ DSCLY
Sbjct: 832 EPRNISEAWSNEYNTQWKKATDSEFNALMENGTWE---LVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLA-LANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLY 1015
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: A0A151U9E7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151U9E7_CAJCA) HSP 1 Score: 96.7 bits (239), Expect = 9.580e-20 Identity = 65/194 (33.51%), Postives = 102/194 (52.58%), Query Frame = 1
Query: 25 DPESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA*LVAQGFSHVEGEDFFETSPP*LAC*PYVLFLA------WLTSIISN*NAWT*TRRI*TPP*KKSCLFSYTPQFSSFSRDMSFARRLRKSMYDPEQSGRNWNNSLDEFLVGIGLQRSTTDSCLY 588
+P S A+AL++ H W+ AM++E+ L+KN TW DL +LP G+ AI K IFK K K+DGS+ R+ A LVA+GFS +G D+ +T P + + LA W I NA+ K ++ PQ + + +LRK++Y +Q+ R W L L+ +G +++ +DS L+
Sbjct: 883 EPISVAQALDNKH---WKQAMQDEYNALLKNHTW---DLVSLPPGRTAITCKWIFKNKYKQDGSILRHKARLVARGFSQQQGLDYTDTFSPVVKPVSIRIVLALAVSKGWPIHQIDVDNAFLNGDL-------KEDIYMLQPQ-GFHNGAPNTVCKLRKALYGLKQAPRAWFQKLTLILLQLGFKQARSDSSLF 1062
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR) HSP 1 Score: 96.3 bits (238), Expect = 1.300e-19 Identity = 58/174 (33.33%), Postives = 89/174 (51.15%), Query Frame = 1
Query: 70 KWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA*LVAQGFSHVEGEDFFETSPP*LAC*PYVLFLAWLTSIISN*NAWT*TRRI*TPP*KKSCLFSYTPQFSSFSRDMSFARRLRKSMYDPEQSGRNWNNSLDEFLVGI-GLQRSTTDSCLY 588
+W+AAM+ E L NGTW+ G LP G+ AI +K +F K +DGS+ +Y A LVAQGFS + G+D+F+T P + + + A + + +A P ++ P + S + L K++Y +Q+GR WN+ L+ L + G RS D CLY
Sbjct: 846 QWKAAMDAEMAQLEANGTWKK---GELPPGRKAIGSKWVFAIKRHQDGSIDKYKARLVAQGFSQIAGQDYFDTFSPVVRQETFRVATALAATENLDSDALDIVGAYLHGPLEEEIYMRQAPGYDDGSGQVYV---LIKALYGLKQAGRVWNHLLNHVLTSLMGWTRSEADPCLY 1013
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Match: A0A034V8I0_BACDO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034V8I0_BACDO) HSP 1 Score: 94.4 bits (233), Expect = 5.100e-19 Identity = 62/192 (32.29%), Postives = 93/192 (48.44%), Query Frame = 1
Query: 28 PESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNAIRTKCIFKRKLKEDGSVARYNA*LVAQGFSHVEGEDFFETSPP*LAC*PYVLFLAWLTSIISN*NAWT*-TRRI*TPP*KKSCLFS--YTPQFSSF--SRDMSFARRLRKSMYDPEQSGRNWNNSLDEFLVGIGLQRSTTDSCLY 588
P++ AEALN +A +W A+ EE L+KN TW E+ LP GQ AI + +F K + DG++ R+ LVA+G + G ++ ET P V+ +W+ +++ W ++ S L Y Q F R + RL K++Y +QSG+ WN LD L IG + CLY
Sbjct: 103 PQTVAEALNCRYAKEWENAIREEHAALIKNKTWSLEN---LPEGQRAIGCRWVFSVKRQVDGAIERFKCRLVAKGCNQQLGVNYKETFSP-------VIRYSWIRMVLALAVEWKLYVHQMDVCTYLNSDLHDIVYMKQPEGFIDERHPNKVLRLNKAIYGLKQSGKEWNEKLDNVLKSIGYVPCVNEPCLY 284 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8521.16493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8521.16493.1 >prot_H-paniculata_contig8521.16493.1 ID=prot_H-paniculata_contig8521.16493.1|Name=mRNA_H-paniculata_contig8521.16493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp MKEDPESGAEALNSPHAGKWRAAMEEEWGVLVKNGTWESEDLGTLPAGQNback to top mRNA from alignment at H-paniculata_contig8521:514..1101+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8521.16493.1 ID=mRNA_H-paniculata_contig8521.16493.1|Name=mRNA_H-paniculata_contig8521.16493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=588bp|location=Sequence derived from alignment at H-paniculata_contig8521:514..1101+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8521:514..1101+ >mRNA_H-paniculata_contig8521.16493.1 ID=mRNA_H-paniculata_contig8521.16493.1|Name=mRNA_H-paniculata_contig8521.16493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=444bp|location=Sequence derived from alignment at H-paniculata_contig8521:514..1101+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |