prot_H-paniculata_contig851.16487.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig851.16487.1
Unique Nameprot_H-paniculata_contig851.16487.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length238
Homology
BLAST of mRNA_H-paniculata_contig851.16487.1 vs. uniprot
Match: D8LEQ7_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ7_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 4.650e-36
Identity = 66/85 (77.65%), Postives = 69/85 (81.18%), Query Frame = 0
Query:  154 RGVHPAMLESEFLAATGQTDAQMDGPGASLSLEEVPYDRDLRWCNTASDSRPCPTMDVSGGVFGRVGAPITLDTGDYERLDRHYQ 238
            R VHP MLESEFLAAT Q +  ++G   SLSLEEVPYDRDLRWCNTASDSRP P MD  GGVFGRVG  IT DTGDYERLDRHYQ
Sbjct:  166 RKVHPGMLESEFLAATEQANGGVEGGVVSLSLEEVPYDRDLRWCNTASDSRPRPKMDPQGGVFGRVGTAITHDTGDYERLDRHYQ 250          
BLAST of mRNA_H-paniculata_contig851.16487.1 vs. uniprot
Match: A0A6H5KDB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB0_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 1.860e-34
Identity = 66/85 (77.65%), Postives = 69/85 (81.18%), Query Frame = 0
Query:  154 RGVHPAMLESEFLAATGQTDAQMDGPGASLSLEEVPYDRDLRWCNTASDSRPCPTMDVSGGVFGRVGAPITLDTGDYERLDRHYQ 238
            R VHP MLESEFLAAT Q +  ++G   SLSLEEVPYDRDLRWCNTASDSRP P MD  GGVFGRVG  IT DTGDYERLDRHYQ
Sbjct:  169 RKVHPGMLESEFLAATEQANGGVEGGAVSLSLEEVPYDRDLRWCNTASDSRPRPKMDPQGGVFGRVGTAITHDTGDYERLDRHYQ 253          
BLAST of mRNA_H-paniculata_contig851.16487.1 vs. uniprot
Match: A0A6V1NUB3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NUB3_HETAK)

HSP 1 Score: 62.0 bits (149), Expect = 1.290e-7
Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 0
Query:  177 DGPGASLSLEEVPYDRDLRWCNTASDSRPCPTMDVSGGVFGRVGAPITLDTGDYERLDRHYQ 238
            D P A LSL+EVPYDRDL+WCN AS++RP  T+     +F +V         +Y +LD HY+
Sbjct:   33 DEPVAILSLDEVPYDRDLKWCNQASNARPRRTVGKGHRMFQQVADITEGAVQEYGQLDSHYR 94          
BLAST of mRNA_H-paniculata_contig851.16487.1 vs. uniprot
Match: A0A7S2RK49_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RK49_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.580e-6
Identity = 27/59 (45.76%), Postives = 37/59 (62.71%), Query Frame = 0
Query:  180 GASLSLEEVPYDRDLRWCNTASDSRPCPTMDVSGGVFGRVGAPITLDTGDYERLDRHYQ 238
            GA LSL++V YDRD+RW N  SD+RP  T+      F ++ + I  DT +Y  LD HY+
Sbjct:   70 GAVLSLDQVSYDRDMRWFNKPSDARPRRTLGKGSRAFNQIES-IANDTREYAALDDHYR 127          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig851.16487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LEQ7_ECTSI4.650e-3677.65Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KDB0_9PHAE1.860e-3477.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1NUB3_HETAK1.290e-746.77Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2RK49_9STRA1.580e-645.76Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig851contigH-paniculata_contig851:28904..31249 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig851.16487.1mRNA_H-paniculata_contig851.16487.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig851 28904..31249 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig851.16487.1 ID=prot_H-paniculata_contig851.16487.1|Name=mRNA_H-paniculata_contig851.16487.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=238bp
QASNGTPHSSRRRRRGGGMGGPINSASPARNPGIRSGSIATENSSGGGGG
VGGGRGHSRRTLWEDKDKMGRLQTTSQSSSSANMTLGNNKESSVNSGGND
SSGTTGRNGATGGHGVTGRGSSSSGSGVAGSRRGGGKGRNGSGRGGGSSG
SGGRGVHPAMLESEFLAATGQTDAQMDGPGASLSLEEVPYDRDLRWCNTA
SDSRPCPTMDVSGGVFGRVGAPITLDTGDYERLDRHYQ
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