prot_H-paniculata_contig849.16472.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig849.16472.1
Unique Name	prot_H-paniculata_contig849.16472.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	100

Homology

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BLAST of mRNA_H-paniculata_contig849.16472.1 vs. uniprot
Match: A0A6H5L1A8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1A8_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 2.710e-11
Identity = 34/93 (36.56%), Postives = 50/93 (53.76%), Query Frame = 0

Query:    3 TIEAAGQRFKKTETFTYLGGTIHSTGDTMVEIMRRGGLAHLCFKKYQRQVYECPNMRIDAKIRVFKANFLGVLLYGYSMWTLLDLHDAKLMEW 95
            T+ AAGQ +K+T+ F YLG TI + G    EI  R   A  C+++    +Y+        KIR+ +A  +  LLYG + W+L   H  KL +W
Sbjct:  105 TVSAAGQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNQW 197

[Close]

BLAST of mRNA_H-paniculata_contig849.16472.1 vs. uniprot
Match: A0A6H5K1C5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1C5_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 3.550e-11
Identity = 34/90 (37.78%), Postives = 48/90 (53.33%), Query Frame = 0

Query:    3 TIEAAGQRFKKTETFTYLGGTIHSTGDTMVEIMRRGGLAHLCFKKYQRQVYECPNMRIDAKIRVFKANFLGVLLYGYSMWTLLDLHDAKL 92
            T+ AAGQ +K+T+ F YLG TI + G    EI  R   A  C+++    +Y+        KIR+ +A  +  LLYG + W L   HD KL
Sbjct:   37 TVSAAGQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRANRQLKIRLLQAEVVETLLYGCASWRLTAEHDTKL 126

[Close]

BLAST of mRNA_H-paniculata_contig849.16472.1 vs. uniprot
Match: A0A6H5LP35_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LP35_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 3.790e-11
Identity = 33/90 (36.67%), Postives = 47/90 (52.22%), Query Frame = 0

Query:    3 TIEAAGQRFKKTETFTYLGGTIHSTGDTMVEIMRRGGLAHLCFKKYQRQVYECPNMRIDAKIRVFKANFLGVLLYGYSMWTLLDLHDAKL 92
            T+ AAGQ +K+T+ F YLG TI + G    EI  R   A  C+++    +Y+        KIR+  A  +  LLYG + W+L   H  KL
Sbjct:   23 TVSAAGQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASIYDMRRANRQLKIRLLMAEVVETLLYGCASWSLTAEHYTKL 112

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BLAST of mRNA_H-paniculata_contig849.16472.1 vs. uniprot
Match: A0A6H5JZD4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZD4_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 5.950e-11
Identity = 35/92 (38.04%), Postives = 50/92 (54.35%), Query Frame = 0

Query:    3 TIEAAGQRFKKTETFTYLGGTIHSTGDTMVEIMRRGGLAHLCFKKYQRQVYECPNMRIDAKIRVFKANFLGVLLYGYSMWTLLDLHDAKLME 94
            T+ AAGQ +K+T+ F YLG TI + G    EI  R   A  C+++    +Y+        KIR+ +A  +  LLYG + W+L   H AKL E
Sbjct:  401 TVSAAGQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTTEHYAKLNE 492

[Close]

BLAST of mRNA_H-paniculata_contig849.16472.1 vs. uniprot
Match: A0A6H5L5J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J5_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 7.190e-11
Identity = 34/90 (37.78%), Postives = 48/90 (53.33%), Query Frame = 0

Query:    3 TIEAAGQRFKKTETFTYLGGTIHSTGDTMVEIMRRGGLAHLCFKKYQRQVYECPNMRIDAKIRVFKANFLGVLLYGYSMWTLLDLHDAKL 92
            T+ AAGQ +K+T+ F YLG  I + G    EI  R   A  CF++    +Y+ P      KIR+ +A  +  LLYG + W+L   H  KL
Sbjct:  107 TVSAAGQSYKQTDRFVYLGRAISADGKADREITSRSCRAWKCFRRNSASMYDRPRANRPLKIRLLQAEVVETLLYGCASWSLTAEHYTKL 196

[Close]

BLAST of mRNA_H-paniculata_contig849.16472.1 vs. uniprot
Match: A0A6H5KQQ1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ1_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 7.220e-11
Identity = 33/90 (36.67%), Postives = 48/90 (53.33%), Query Frame = 0

Query:    3 TIEAAGQRFKKTETFTYLGGTIHSTGDTMVEIMRRGGLAHLCFKKYQRQVYECPNMRIDAKIRVFKANFLGVLLYGYSMWTLLDLHDAKL 92
            T+ AAGQ +K+T+ F YLG TI + G    EI  R   A  C+++    +Y+        KIR+ +A  +  LLYG + W+L   H  KL
Sbjct:   22 TVSAAGQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRANRQLKIRLLQAEVVEALLYGCASWSLTAEHYTKL 111

[Close]

BLAST of mRNA_H-paniculata_contig849.16472.1 vs. uniprot
Match: A0A6H5L7Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y9_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.350e-10
Identity = 33/91 (36.26%), Postives = 50/91 (54.95%), Query Frame = 0

Query:    3 TIEAAGQRFKKTETFTYLGGTIHSTGDTMVEIMRRGGLAHLCFKKYQRQVYECPNMRIDAKIRVFKANFLGVLLYGYSMWTLLDLHDAKLM 93
            T+ AAGQ +K+T+ F YLG TI + G    EI  R   A  C+++    +Y+   +    KIR+ +A  +  LLYG + W+L   H  KL+
Sbjct:   27 TVSAAGQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRKSASMYDRRRVDRKLKIRLLQAEVVETLLYGCASWSLTAEHYTKLI 117

[Close]

BLAST of mRNA_H-paniculata_contig849.16472.1 vs. uniprot
Match: A0A6H5JKH3_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKH3_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.680e-10
Identity = 33/90 (36.67%), Postives = 48/90 (53.33%), Query Frame = 0

Query:    3 TIEAAGQRFKKTETFTYLGGTIHSTGDTMVEIMRRGGLAHLCFKKYQRQVYECPNMRIDAKIRVFKANFLGVLLYGYSMWTLLDLHDAKL 92
            T+ AAGQ +K+T+ F YLG TI + G    EI  R   A  C+++    +Y+        KIR+ +A  +  LLYG + W+L   H  KL
Sbjct:   56 TVSAAGQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKL 145

[Close]

BLAST of mRNA_H-paniculata_contig849.16472.1 vs. uniprot
Match: A0A6H5KL25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL25_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 2.070e-10
Identity = 33/90 (36.67%), Postives = 48/90 (53.33%), Query Frame = 0

Query:    3 TIEAAGQRFKKTETFTYLGGTIHSTGDTMVEIMRRGGLAHLCFKKYQRQVYECPNMRIDAKIRVFKANFLGVLLYGYSMWTLLDLHDAKL 92
            T+ AAGQ +K+T+ F YLG TI + G    EI  R   A  C+++    +Y+        KIR+ +A  +  LLYG + W+L   H  KL
Sbjct:  394 TVSAAGQTYKQTDRFVYLGRTISADGKADREITSRSYRAWKCYRRNSASMYDRRRANCQVKIRLLQAEVVETLLYGCASWSLTAEHYTKL 483

[Close]

BLAST of mRNA_H-paniculata_contig849.16472.1 vs. uniprot
Match: A0A6H5JR12_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR12_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 2.780e-10
Identity = 33/90 (36.67%), Postives = 48/90 (53.33%), Query Frame = 0

Query:    3 TIEAAGQRFKKTETFTYLGGTIHSTGDTMVEIMRRGGLAHLCFKKYQRQVYECPNMRIDAKIRVFKANFLGVLLYGYSMWTLLDLHDAKL 92
            T+ AAGQ +K+T+ F YLG TI + G    EI  R   A  C+++    +Y+        KIR+ +A  +  LLYG + W+L   H  KL
Sbjct:  259 TVSAAGQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASIYDRRRANRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKL 348

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig849.16472.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig849.16472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L1A8_9PHAE	2.710e-11	36.56	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K1C5_9PHAE	3.550e-11	37.78	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5LP35_9PHAE	3.790e-11	36.67	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JZD4_9PHAE	5.950e-11	38.04	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5L5J5_9PHAE	7.190e-11	37.78	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KQQ1_9PHAE	7.220e-11	36.67	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5L7Y9_9PHAE	1.350e-10	36.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JKH3_9PHAE	1.680e-10	36.67	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5KL25_9PHAE	2.070e-10	36.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JR12_9PHAE	2.780e-10	36.67	Reverse transcriptase domain-containing protein n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47027:SF5		coord: 6..95
None	No IPR available	PANTHER	PTHR47027	FAMILY NOT NAMED	coord: 6..95
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 86..99
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 66..85
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..65
None	No IPR available	TMHMM	TMhelix		coord: 66..85

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig849	contig	H-paniculata_contig849:29706..30005 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig849.16472.1	mRNA_H-paniculata_contig849.16472.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig849 29706..30005 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig849.16472.1 ID=prot_H-paniculata_contig849.16472.1|Name=mRNA_H-paniculata_contig849.16472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp
VLTIEAAGQRFKKTETFTYLGGTIHSTGDTMVEIMRRGGLAHLCFKKYQR
QVYECPNMRIDAKIRVFKANFLGVLLYGYSMWTLLDLHDAKLMEWRFWD*