prot_H-paniculata_contig8422.16427.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8422.16427.1
Unique Nameprot_H-paniculata_contig8422.16427.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length524
Homology
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: A0A6H5JVD3_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD3_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 6.620e-35
Identity = 135/408 (33.09%), Postives = 168/408 (41.18%), Query Frame = 0
Query:  126 RRSAGGLRRASSVGAGAPVCIVCREVTDAA-LGYIGYGQRSCVLDVGTEEGRWGSPPVHLQFCGHALHYPCFEKYFATVVQASDMYTNRALDVDKGEFHCPLCKTVGNLMVPYGMVEATTMPTR-------------------------GKEGGGERRXXXXXXGRIPMEAEGKQQQQAIPCA------GWHETKAASSLEKALATVLPPSSLTTRSAL----------------AGERRPRGRL-----------------------------------LSEYYPPFQPSVKKFLESINELESSRSSASSRACPEQLFIGGCRALAYSASXXXXXXXXXXXXXXXXXXXXXXXSWADEVG------DAGDVSRRRYLGKVAMVLRRAARQTRVGENICRKVAASLRG 444
            +R     R   S+    P CIVCR+  D   LGY+G+G+RS VLDV   +G   SP VHLQFCGH LHY CFEKY+ T+VQ SD   N ALDVDKGEFHCP CK VGNLMVP     + T  +                          GKE  G+        G  PM+   ++ Q +          GW + KAA SL  A      PS    R +                 A +R   G +                                   LS     F  + +KFLES+ E+E+  +       PE LF+  CRALAYS S                       + +   G      D GD +R R L  VA VLRRAA Q  + E + RK+A SL G
Sbjct:  141 KRKXXXXRSRGSIKEQRPECIVCRDDADRGPLGYVGFGRRSQVLDV-RPDGEERSPGVHLQFCGHTLHYSCFEKYYVTMVQMSDSNNNVALDVDKGEFHCPFCKAVGNLMVPCLEESSETEDSDWXXXXXXXXXXXXXXXXXXXXVGLGGKERPGKGATADHAGG-DPMDVSEEEHQSSDAGGDGDDDVGWLDRKAALSLMTAR-----PSMFAARQSXXXXXXXXXXXXXXXXXAMDRTGSGFVYMVMAGNADSXXXXXXXXXXXXXXXXXXXXXXXXELSAQQQLFDSATRKFLESVYEVETGVTPVLPSVTPEALFLSACRALAYSVSSAATTASPIDSLRGYATAVAAAAAGSGTRGAAATAIDHGDATRLRCLRLVAGVLRRAAGQAGLEETVRRKLAGSLAG 541          
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: D7G2M8_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M8_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 4.490e-32
Identity = 132/385 (34.29%), Postives = 162/385 (42.08%), Query Frame = 0
Query:  143 PVCIVCREVTDAA-LGYIGYGQRSCVLDVGTEEGRWGSPPVHLQFCGHALHYPCFEKYFATVVQASDMYTNRALDVDKGEFHCPLCKTVGNLMVPYGMVEATTMPTRGKE------------------GGGERRXXXXXXGRI---PMEAEGKQQQQAIPCA------GWHETKAASSLEKALATVLPPSSLTTRSALAG-----------------ERRPRGRLLSEYYPP---------------------------------FQPSVKKFLESINELESSRSSASSRACPEQLFIGGCRALAYSASXXXXXXXXXXXXXXXXXXXXXXXSWADEVG-----DAGDVSRRRYLGKVAMVLRRAARQTRVGENICRKVAASLRG 444
            P CIVCR+  D   LG++G+G+RS VLDV   +G   SP VHLQFCGHALHY CFEKY+ T+VQ SD   N ALDVD+GEFHCP CK VGNLMVP     +    +                      GG ER       G     PM+   ++ Q +          GW + KAA SLE A      PS    R +                    +R   G +                                        F  + +KFLES+ E+E+  +       PE LF+  CRALAYS S                  XXXXX    E       D G  +R R L  VA VLRRAA Q  + E + RK+A SL G
Sbjct: 1653 PECIVCRDDADRGPLGFVGFGRRSQVLDV-RPDGEERSPGVHLQFCGHALHYSCFEKYYVTMVQISDSNNNVALDVDQGEFHCPFCKAVGNLMVPCFEESSEAEDSDWXXXXXXXXXXXXXXXXXVGVGGKERLGKGAAVGHAGGDPMDVSEEEDQSSGASGDGDDDVGWLDRKAALSLETAR-----PSMFAARQSXXXXXXXXXXXXXXXXXXXXDRTGSGFVYMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLFDSATRKFLESVYEVETGVTPVLPSVTPEALFLSACRALAYSVSSAATTASPIDSLRGYAAAXXXXXXXXXEGXXAAAIDHGGATRLRCLRLVAGVLRRAAGQAGLEETVRRKLAGSLAG 2031          
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: A0A835YQN3_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQN3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.450e-12
Identity = 43/129 (33.33%), Postives = 59/129 (45.74%), Query Frame = 0
Query:  143 PVCIVCREVTDAALGYIGYGQRSCVLDVGTEEGRWGSPP----------------------------------VHLQFCGHALHYPCFEKYFATVVQASDMYTNRALDVDKGEFHCPLCKTVGNLMVPY 237
            P+CI C EVT   +G+I +  RS VLD+       G PP                                  VHL  CGHALH  CF +Y+ +V   +D++     D+D GEF CP CK + N++VP+
Sbjct: 1128 PICIACHEVTAEPVGHIAFAHRSSVLDMRANAPD-GVPPLVAGPPLQLAPMNGASQIQPTEADYKLGFRGFAGVHLHLCGHALHSSCFARYYDSVRGQTDIFGRPVTDLDAGEFRCPFCKALSNVLVPH 1255          
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: A0A7S2H100_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H100_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.170e-11
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 0
Query:  174 EGRWGSPPVHLQFCGHALHYPCFEKYFATVVQASDMYTNR--ALDVDKGEFHCPLCKTVGNLMVPY 237
            EG W      +  CGHALHY CF++YF T VQ S+ + N   AL++D+GE  CPLCKTV NL+VP+
Sbjct:   11 EGIW------ITCCGHALHYDCFDQYFVTTVQRSEAHGNSHVALELDRGEIQCPLCKTVSNLLVPH 70          
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: A0A485KAR8_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KAR8_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 3.700e-10
Identity = 48/121 (39.67%), Postives = 65/121 (53.72%), Query Frame = 0
Query:  144 VCIVC--REVTDAA-LGYIGYGQRSC--VLDVGTEEGRWGSP----PVHLQFCGHALHYPCFEKYFATVVQ---ASDMYTNRALDVDKGEFHCPLCKTVGNLMVPYGMVEATTMPTRGKEG 252
            +C +C  +E +DAA L YIG+   S   V  V  ++  W       P+ +Q CGH +H  C+E Y+AT  Q     + Y N A+DV KGEF CPLCK + N++VP     A T P  G  G
Sbjct: 1028 MCAMCHTKESSDAAALCYIGFVHPSSLNVPSVHAKKTPWEDMKKEVPLTMQCCGHCVHMGCWESYYATQFQKVITGEAYLN-AVDVKKGEFLCPLCKAISNVLVPVSAAPAPTAPHVGNIG 1147          
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: K8YRX5_NANGC (E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRX5_NANGC)

HSP 1 Score: 68.6 bits (166), Expect = 1.880e-8
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
Query:  171 GTEEGRWGSPPVHLQFCGHALHYPCFEKYFATVVQASDMYTNRALDVDKGEFHCPLCKTVGNLMVPY 237
            G +E R G   + +Q CGHALHY CF+ YFA+VV++S+   N   +V  GE+ CP CK V   +VP+
Sbjct:  687 GFQERREG---LIVQLCGHALHYGCFDAYFASVVESSEAMGNLIYNVQAGEYPCPYCKAVSTCLVPH 750          
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: A0A024TI13_9STRA (E3 ubiquitin-protein ligase n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TI13_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.350e-8
Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 0
Query:  145 CIVCREV-----TDAALGYIGYGQRSCVLDVGTEEGR---WGSP----PVHLQFCGHALHYPCFEKYFATVVQ---ASDMYTNRALDVDKGEFHCPLCKTVGNLMVP 236
            C +C E      T+A+L ++GY   S +       G+   W       P+ +Q CGH +H  C++ YFAT  Q     + Y N A+DV KGEF CP CK++ N++VP
Sbjct: 1028 CAMCHETESATETEASLCFVGYVHPSALNVPAIHSGKKTPWEDMRREVPLTMQCCGHCVHMGCWDSYFATQFQKVITGEAYLN-AVDVKKGEFLCPQCKSISNVLVP 1133          
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: W7U0V5_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0V5_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.510e-8
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
Query:  171 GTEEGRWGSPPVHLQFCGHALHYPCFEKYFATVVQASDMYTNRALDVDKGEFHCPLCKTVGNLMVPY 237
            G +E R G   + +Q CGHALHY CF+ YFA+VV++S+   N   +V  GE+ CP CK V   +VP+
Sbjct: 1637 GFQERREG---LIVQLCGHALHYGCFDAYFASVVESSEAMGNLIYNVQAGEYPCPYCKAVSTCLVPH 1700          
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: A0A182QIH1_9DIPT (E3 ubiquitin-protein ligase n=1 Tax=Anopheles farauti TaxID=69004 RepID=A0A182QIH1_9DIPT)

HSP 1 Score: 67.4 bits (163), Expect = 5.540e-8
Identity = 44/121 (36.36%), Postives = 58/121 (47.93%), Query Frame = 0
Query:  145 CIVCREVTDAALG--------YIGYGQRSCVLDVGTEEGRWG---------SPPVHLQFCGHALHYPCFEKYFAT--VVQASDMYTNRA---LDVDKGEFHCPLCKTVGNLMVPYGMVEAT 243
            CI+C E  ++ LG        Y  + QRS VL    +    G          P  HL  CGH +H  CFEKYF+   + +    Y NRA    D+DK EF CPLC+ +GN ++P     AT
Sbjct: 1176 CILCSE--ESVLGTFAKSGMVYAAFVQRSSVLSRYQQTDERGLLQLIETNTHPSPHLTTCGHVMHVDCFEKYFSNEMIKEHRRPYRNRAPILFDIDKQEFLCPLCRFLGNCLLPLIAPHAT 1294          
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: A0A7S1U5F4_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5F4_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.860e-7
Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 0
Query:  176 RWGSPPVHLQFCGHALHYPCFEKYFATVVQA----SDMYTNRALDVDKGEFHCPLCKTVGNLMVPY 237
            +WGS  + L FCGH +H+ C++ Y AT V       D  T    DV+KGE  CPLCK + N++VP+
Sbjct:  335 KWGSERLALSFCGHCVHFSCWDGYLATQVNLFENRGDSDTAVTCDVEKGEALCPLCKHIVNILVPH 400          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVD3_9PHAE6.620e-3533.09E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
D7G2M8_ECTSI4.490e-3234.29E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A835YQN3_9STRA1.450e-1233.33E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
A0A7S2H100_9STRA2.170e-1153.03E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dic... [more]
A0A485KAR8_9STRA3.700e-1039.67E3 ubiquitin-protein ligase n=1 Tax=Aphanomyces st... [more]
K8YRX5_NANGC1.880e-846.27E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Nan... [more]
A0A024TI13_9STRA2.350e-836.45E3 ubiquitin-protein ligase n=3 Tax=Aphanomyces in... [more]
W7U0V5_9STRA2.510e-846.27E3 ubiquitin-protein ligase n=2 Tax=Monodopsidacea... [more]
A0A182QIH1_9DIPT5.540e-836.36E3 ubiquitin-protein ligase n=1 Tax=Anopheles fara... [more]
A0A7S1U5F4_9STRA1.860e-743.94E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Pha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 145..227
e-value: 0.0016
score: 27.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 145..228
score: 8.698
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 2..293
NoneNo IPR availablePANTHERPTHR21497:SF24E3 UBIQUITIN-PROTEIN LIGASE UBR1coord: 2..293
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 22..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..523
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 144..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8422contigH-paniculata_contig8422:2146..6321 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8422.16427.1mRNA_H-paniculata_contig8422.16427.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8422 364..6378 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8422.16427.1 ID=prot_H-paniculata_contig8422.16427.1|Name=mRNA_H-paniculata_contig8422.16427.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=524bp
MKARKTAAQKRMMDMMEQKAKAFALVMDGMDESSEEENDNIDEKEKPDEE
NVYGASSHRRGIYYAADIDRSDATSASGFVDENDGSGTGTVAGGFSVEGG
NGEPGADSALVGQGGGGGGSGTAGRRRSAGGLRRASSVGAGAPVCIVCRE
VTDAALGYIGYGQRSCVLDVGTEEGRWGSPPVHLQFCGHALHYPCFEKYF
ATVVQASDMYTNRALDVDKGEFHCPLCKTVGNLMVPYGMVEATTMPTRGK
EGGGERRGEEAGGGRIPMEAEGKQQQQAIPCAGWHETKAASSLEKALATV
LPPSSLTTRSALAGERRPRGRLLSEYYPPFQPSVKKFLESINELESSRSS
ASSRACPEQLFIGGCRALAYSASAATAVTMTEDSTGGGGHGEGGGGSWAD
EVGDAGDVSRRRYLGKVAMVLRRAARQTRVGENICRKVAASLRGHDVSCP
EMSEELLYCGIEEKKRLEHRTSSSSNSSSSRSRRRFTRIGRRCGAVRGGR
GTNGPAASGGGPNQILERHGRGC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR039164UBR1-like