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Homology
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: A0A6H5JVD3_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD3_9PHAE) HSP 1 Score: 134 bits (337), Expect = 7.580e-29 Identity = 67/112 (59.82%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 433 RRSAGGLRRASSVGAGAPVCIVCREVTDAA-LGYIGYGQRSCVLDVGTEEGRWGSPPVHLQFCGHALHYPCFEKYFATVVQASDMYTNRALDVDKGEFHCPLCKTVGNLMVP 765
+R R S+ P CIVCR+ D LGY+G+G+RS VLDV +G SP VHLQFCGH LHY CFEKY+ T+VQ SD N ALDVDKGEFHCP CK VGNLMVP
Sbjct: 141 KRKXXXXRSRGSIKEQRPECIVCRDDADRGPLGYVGFGRRSQVLDV-RPDGEERSPGVHLQFCGHTLHYSCFEKYYVTMVQMSDSNNNVALDVDKGEFHCPFCKAVGNLMVP 251
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: D7G2M8_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M8_ECTSI) HSP 1 Score: 132 bits (332), Expect = 1.280e-27 Identity = 63/95 (66.32%), Postives = 72/95 (75.79%), Query Frame = 1
Query: 484 PVCIVCREVTDAA-LGYIGYGQRSCVLDVGTEEGRWGSPPVHLQFCGHALHYPCFEKYFATVVQASDMYTNRALDVDKGEFHCPLCKTVGNLMVP 765
P CIVCR+ D LG++G+G+RS VLDV +G SP VHLQFCGHALHY CFEKY+ T+VQ SD N ALDVD+GEFHCP CK VGNLMVP
Sbjct: 1653 PECIVCRDDADRGPLGFVGFGRRSQVLDV-RPDGEERSPGVHLQFCGHALHYSCFEKYYVTMVQISDSNNNVALDVDQGEFHCPFCKAVGNLMVP 1746
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: A0A835YQN3_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQN3_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 4.210e-12 Identity = 43/129 (33.33%), Postives = 59/129 (45.74%), Query Frame = 1
Query: 484 PVCIVCREVTDAALGYIGYGQRSCVLDVGTEEGRWGSPP----------------------------------VHLQFCGHALHYPCFEKYFATVVQASDMYTNRALDVDKGEFHCPLCKTVGNLMVPY 768
P+CI C EVT +G+I + RS VLD+ G PP VHL CGHALH CF +Y+ +V +D++ D+D GEF CP CK + N++VP+
Sbjct: 1128 PICIACHEVTAEPVGHIAFAHRSSVLDMRANAPD-GVPPLVAGPPLQLAPMNGASQIQPTEADYKLGFRGFAGVHLHLCGHALHSSCFARYYDSVRGQTDIFGRPVTDLDAGEFRCPFCKALSNVLVPH 1255
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: A0A7S2H100_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H100_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 5.080e-11 Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 577 EGRWGSPPVHLQFCGHALHYPCFEKYFATVVQASDMYTNR--ALDVDKGEFHCPLCKTVGNLMVPY 768
EG W + CGHALHY CF++YF T VQ S+ + N AL++D+GE CPLCKTV NL+VP+
Sbjct: 11 EGIW------ITCCGHALHYDCFDQYFVTTVQRSEAHGNSHVALELDRGEIQCPLCKTVSNLLVPH 70
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: A0A485KAR8_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KAR8_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 9.520e-10 Identity = 48/121 (39.67%), Postives = 65/121 (53.72%), Query Frame = 1
Query: 487 VCIVC--REVTDAA-LGYIGYGQRSC--VLDVGTEEGRWGSP----PVHLQFCGHALHYPCFEKYFATVVQ---ASDMYTNRALDVDKGEFHCPLCKTVGNLMVPYGMVEATTMPTRGKEG 813
+C +C +E +DAA L YIG+ S V V ++ W P+ +Q CGH +H C+E Y+AT Q + Y N A+DV KGEF CPLCK + N++VP A T P G G
Sbjct: 1028 MCAMCHTKESSDAAALCYIGFVHPSSLNVPSVHAKKTPWEDMKKEVPLTMQCCGHCVHMGCWESYYATQFQKVITGEAYLN-AVDVKKGEFLCPLCKAISNVLVPVSAAPAPTAPHVGNIG 1147
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: K8YRX5_NANGC (E3 ubiquitin-protein ligase (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRX5_NANGC) HSP 1 Score: 68.6 bits (166), Expect = 4.410e-8 Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 568 GTEEGRWGSPPVHLQFCGHALHYPCFEKYFATVVQASDMYTNRALDVDKGEFHCPLCKTVGNLMVPY 768
G +E R G + +Q CGHALHY CF+ YFA+VV++S+ N +V GE+ CP CK V +VP+
Sbjct: 687 GFQERREG---LIVQLCGHALHYGCFDAYFASVVESSEAMGNLIYNVQAGEYPCPYCKAVSTCLVPH 750
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: A0A024TI13_9STRA (E3 ubiquitin-protein ligase n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TI13_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 5.620e-8 Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 1
Query: 490 CIVCREV-----TDAALGYIGYGQRSCVLDVGTEEGR---WGSP----PVHLQFCGHALHYPCFEKYFATVVQ---ASDMYTNRALDVDKGEFHCPLCKTVGNLMVP 765
C +C E T+A+L ++GY S + G+ W P+ +Q CGH +H C++ YFAT Q + Y N A+DV KGEF CP CK++ N++VP
Sbjct: 1028 CAMCHETESATETEASLCFVGYVHPSALNVPAIHSGKKTPWEDMRREVPLTMQCCGHCVHMGCWDSYFATQFQKVITGEAYLN-AVDVKKGEFLCPQCKSISNVLVP 1133
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: W7U0V5_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0V5_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 6.040e-8 Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 568 GTEEGRWGSPPVHLQFCGHALHYPCFEKYFATVVQASDMYTNRALDVDKGEFHCPLCKTVGNLMVPY 768
G +E R G + +Q CGHALHY CF+ YFA+VV++S+ N +V GE+ CP CK V +VP+
Sbjct: 1637 GFQERREG---LIVQLCGHALHYGCFDAYFASVVESSEAMGNLIYNVQAGEYPCPYCKAVSTCLVPH 1700
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: A0A182QIH1_9DIPT (E3 ubiquitin-protein ligase n=1 Tax=Anopheles farauti TaxID=69004 RepID=A0A182QIH1_9DIPT) HSP 1 Score: 67.4 bits (163), Expect = 1.310e-7 Identity = 44/121 (36.36%), Postives = 58/121 (47.93%), Query Frame = 1
Query: 490 CIVCREVTDAALG--------YIGYGQRSCVLDVGTEEGRWG---------SPPVHLQFCGHALHYPCFEKYFAT--VVQASDMYTNRA---LDVDKGEFHCPLCKTVGNLMVPYGMVEAT 786
CI+C E ++ LG Y + QRS VL + G P HL CGH +H CFEKYF+ + + Y NRA D+DK EF CPLC+ +GN ++P AT
Sbjct: 1176 CILCSE--ESVLGTFAKSGMVYAAFVQRSSVLSRYQQTDERGLLQLIETNTHPSPHLTTCGHVMHVDCFEKYFSNEMIKEHRRPYRNRAPILFDIDKQEFLCPLCRFLGNCLLPLIAPHAT 1294
BLAST of mRNA_H-paniculata_contig8422.16427.1 vs. uniprot
Match: A0A7S1U5F4_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5F4_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 4.250e-7 Identity = 29/66 (43.94%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 583 RWGSPPVHLQFCGHALHYPCFEKYFATVVQA----SDMYTNRALDVDKGEFHCPLCKTVGNLMVPY 768
+WGS + L FCGH +H+ C++ Y AT V D T DV+KGE CPLCK + N++VP+
Sbjct: 335 KWGSERLALSFCGHCVHFSCWDGYLATQVNLFENRGDSDTAVTCDVEKGEALCPLCKHIVNILVPH 400
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 150.6 |
| Seed ortholog evalue | 2e-33 |
| Seed eggNOG ortholog | 2880.D7G2M8 |
| KEGG ko | ko:K10625,ko:K11978 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000151,GO:0000280,GO:0001101,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006310,GO:0006325,GO:0006342,GO:0006355,GO:0006464,GO:0006508,GO:0006511,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0007140,GO:0007141,GO:0007276,GO:0007283,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009620,GO:0009719,GO:0009725,GO:0009737,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009966,GO:0009968,GO:0009987,GO:0010029,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010528,GO:0010529,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010646,GO:0010648,GO:0016043,GO:0016458,GO:0016567,GO:0016569,GO:0016570,GO:0016574,GO:0016597,GO:0016740,GO:0019216,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019941,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0023051,GO:0023057,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0032006,GO:0032007,GO:0032446,GO:0032501,GO:0032504,GO:0032991,GO:0033522,GO:0033993,GO:0034641,GO:0035825,GO:0036094,GO:0036211,GO:0040029,GO:0042221,GO:0043161,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043200,GO:0043201,GO:0043207,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0044703,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048232,GO:0048285,GO:0048519,GO:0048523,GO:0048580,GO:0048583,GO:0048585,GO:0048609,GO:0050789,GO:0050793,GO:0050794,GO:0050832,GO:0050896,GO:0050994,GO:0051171,GO:0051172,GO:0051239,GO:0051252,GO:0051253,GO:0051276,GO:0051321,GO:0051603,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0061630,GO:0061659,GO:0061982,GO:0065007,GO:0070647,GO:0070728,GO:0070887,GO:0071229,GO:0071230,GO:0071233,GO:0071310,GO:0071417,GO:0071495,GO:0071596,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097305,GO:0098542,GO:0140013,GO:0140096,GO:1900140,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902494,GO:1902531,GO:1902532,GO:1902679,GO:1903046,GO:1903506,GO:1903507,GO:1990234,GO:2000026,GO:2000112,GO:2000113,GO:2001141 |
| EggNOG free text desc. | E3 ubiquitin-protein ligase |
| EggNOG OGs | KOG1139@1,KOG1139@2759,KOG1140@1,KOG1140@2759 |
| EC | 2.3.2.27 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko04121 |
| Exons | 7 |
| Model size | 2575 |
| Cds size | 1572 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8422.16427.1 >prot_H-paniculata_contig8422.16427.1 ID=prot_H-paniculata_contig8422.16427.1|Name=mRNA_H-paniculata_contig8422.16427.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=524bp
MKARKTAAQKRMMDMMEQKAKAFALVMDGMDESSEEENDNIDEKEKPDEE
NVYGASSHRRGIYYAADIDRSDATSASGFVDENDGSGTGTVAGGFSVEGG
NGEPGADSALVGQGGGGGGSGTAGRRRSAGGLRRASSVGAGAPVCIVCRE
VTDAALGYIGYGQRSCVLDVGTEEGRWGSPPVHLQFCGHALHYPCFEKYF
ATVVQASDMYTNRALDVDKGEFHCPLCKTVGNLMVPYGMVEATTMPTRGK
EGGGERRGEEAGGGRIPMEAEGKQQQQAIPCAGWHETKAASSLEKALATV
LPPSSLTTRSALAGERRPRGRLLSEYYPPFQPSVKKFLESINELESSRSS
ASSRACPEQLFIGGCRALAYSASAATAVTMTEDSTGGGGHGEGGGGSWAD
EVGDAGDVSRRRYLGKVAMVLRRAARQTRVGENICRKVAASLRGHDVSCP
EMSEELLYCGIEEKKRLEHRTSSSSNSSSSRSRRRFTRIGRRCGAVRGGR
GTNGPAASGGGPNQILERHGRGC* back to topmRNA from alignment at H-paniculata_contig8422:364..6378- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig8422.16427.1 ID=mRNA_H-paniculata_contig8422.16427.1|Name=mRNA_H-paniculata_contig8422.16427.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6015bp|location=Sequence derived from alignment at H-paniculata_contig8422:364..6378- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCGTAGAGGGCGCGGGGTTGGTAGGGGTGACAGCGGCAGCAGATGCAGG
ACTGGACATGAAGGCGAGGAAAACGGCCGCTCAGAAGCGAATGATGGACA
TGATGGAGCAGAAGGCGAAAGCTTTTGCGTTGGTCATGGACGGTATGGAC
GAAAGCTCTGAGGAGGAAAATGATAATATTGATGAGAAGGAGAAGCCAGA
TGAAGAGAATGTTTATGGTGCTAGCAGCCATCGTCGCGGTATCTACTATG
CTGCCGATATTGATAGAAGTGATGCAACGTCGGCGTCGGGCTTTGTTGAT
GAGAATGACGGCAGCGGCACGGGCACTGTCGCTGGTGGGTTTTCCGTGGA
AGGAGGCAATGGAGAACCAGGAGCGGATAGTGCTCTTGTTGGCCAAGGTG
GTGGTGGCGGTGGTAGTGGTACAGCTGGACGTCGACGGAGCGCTGGCGGT
CTGAGAAGGGCGTCTTCGGTTGGAGCGGGAGCGCCTGTGTGTATCGTATG
TCGCGAGGTGACGGATGCGGCTCTGGGTTACATCGGGTACGGGCAGAGGT
CTTGCGTCCTGGACGTGGGGACGGAGGAAGGGCGGTGGGGATCGCCGCCA
GTGCACTTGCAGGTTTGTGTTGGGGGGGGGGGGTGCCATGTAGGCTGTTT
GGTGACTGTGTTGTACTTTTTTACTTGGGTGTTGATTTTTATTTTTATTT
TTTTGCCTCCTTTTCGAGTCTTGTTGATTTTAGTTGCGTACGGTATGTGC
GTTGTGTAACTCTGTGGATGTTGTTTTGGTGTTGGTACGTTCTGTGTCAT
GTGGTGTTTGGTTCGTGTTTTATCGATTTGTTTCGCACGGTGTTAGTCCT
CGCAAGCGTCGTCATTTTCAGTCAGTATTGATAGTTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTCTCATATTCGATGCC
ATGTTGCCATTCGCTTGATATTTGCTTACATGTTCATTTCCTTCACTTGC
GTTTATACGATTTCTCTACACGAACCCCCTCCCAATCTCCCCTACCTTGG
CCCCTGCTGCACGTAATCAGTTTTGTGGTCACGCATTGCACTACCCGTGC
TTCGAGAAGTACTTCGCGACGGTGGTGCAGGCGTCGGACATGTACACGAA
CCGGGCGCTCGACGTGGACAAGGGAGAGTTCCACTGCCCCCTGTGCAAGA
CCGTGGGTAACTTGATGGTGCCGTACGGGATGGTGGAAGCTACGACGATG
CCGACAAGAGGCAAAGAGGGAGGAGGGGAGAGGCGGGGGGAAGAGGCGGG
AGGAGGCCGGATTCCTATGGAAGCAGAGGGGAAGCAGCAACAGCAGGTTG
AGTTTTTCAAGCATGCACTTGATCGAACGCAAACCCTTGCATCGTCGGCA
CTTTGCCGTATGGGCGTGCCGTATGGGCGTGCCGTATGGGCGTGCCGTGT
GGACGCACAGCTACAATCCAATGTAGCCGTACTGTAGCAGTACAGTAGAG
CCGGTCAGTATTGATTCTCGTTGCGTATACCGCGGTGTAGGTAGTTGATT
TGTATGAGTGTTCCGTGTGGGGACAAGGTATCCCTTGTGGCGTCTCACTT
GATGACGAGTGGGAGTGAACTTGACCCCCATAGCGTACGAGTTGCTAGGA
ATTTTTATTTCAGGAGCCATCCTAATATATTGATCGAGTCTGTAAAGCTT
TCAACGATGTACCATGGATAAGAATCACTCATCGATGATGACCAAGTGGC
GTGCCAGGAATTAAGTGATGGGTATTATTTTGTATAAAAACAAAAGGCGT
GTGTATTGTGTGCCCTCTCAGGCGATACCCTGCGCGGGTTGGCATGAAAC
CAAGGCGGCGTCTTCCCTCGAAAAAGCCCTTGCAACAGTGCTACCGCCAT
CAAGTCTAACAACAAGATCGGCATTAGCAGGAGAAAGAAGGCCACGTGGA
AGGTTGCTATCTGAATATTACCCACCCTTCCAGCCGTCTGTCAAGAAGTT
TCTGGAGGTGCGGTGGGATTTTTCTGGGATTTTTTCATGTTGTGGAGTTG
GTTTGGGTCCTTTGTTCCCTTGTGTGTAGCTTATTTAGCAGGCGGCGAGA
AGCTGTAATTCTGTGCTGTTGAGGAACAAGAAGGACTTGGCGTCTTGAGC
GTGTTTTTTTTTCTGTGGGTATTTTGACCCCCCGCGCAACCCACATGTGC
CCCCATCTTAAGGTATGCTGATACTGATGAGTGCATGAAGCTTTGAAGTA
CGAGCCACACATGACACCTGACGAGTACGTGAATGGTACTCTGGAAAATT
TACAATCGCTGCACGTTTTGATTTTAATGTTTCTTTTTGTAATCCTCCTC
CGGTATGCCCTACCTGCCAAGGTAACGCCGTTTTCCTCTCATTGTTTACC
GGTGTTGATGAGTATGCAATCGCGTCTTCAATCGCCTTTTTTTAATCGAA
TTTTGCTCTATAGCCTTATGCTGGGGGCGACAAAGTTATAACACTGGCTT
TAATCTGCGGCAAGTGTTGAGCGTTGATTTGGGTGCGAGGTTTTGTAGAT
TAATATGGTTTTGATCAGGCAGGTATTCACTTGTAGGTCATGTCGTGTCG
TGTCATGTCTACTCACAGTATGCGTACAAGTTAGGCATTGATCTCCCTTG
TGAAGGTATTGTAGTGCTTCATGCGGTGCCTGTTCGAAGGAATGTAAGAA
ATTTTCGTACTTGGTCATGATATGGGCAAGATGATGGATCTGTTGTATCC
GGCGTCCTGTTGAGCTACTCAGCACCGTACCATAACATTCTTCAAGTCGG
TTCAAAACTATTTCTCACCTGGTGGATGCGCGCAATTGGTTATGGATGAT
TTGTAGCAGTGGTGATGAGGAAGTGAGCAATCGTTCATGTACAGGTCTCT
CAGTTTTGTGTACTCCACGCTCTCACGATGGGGTTAGCTACGAAGCTACC
CGTCCCCCATCTCGACGCGTTGTCAACCGTCCAACAGCTATGCCTTGCAA
AGCATGTGTACCCACCCCCCCTTCTCCCATCCGCGCGCCTCAAACCTATG
TACCCGCCGCCTCCCCTTTCGTTGCTCTCCCCTACCCAACAGTCGATTAA
TGAACTGGAGTCGAGTCGATCTTCCGCCAGCTCCCGCGCCTGTCCCGAAC
AGCTATTCATAGGGGGCTGCCGTGCCCTGGCATACTCGGCCAGTGCAGCG
ACTGCAGTGACTATGACAGAAGACAGCACCGGTGGCGGCGGCCATGGCGA
GGGTGGCGGGGGCAGCTGGGCAGACGAAGTGGGCGATGCCGGAGATGTTT
CTCGGAGGCGTTATCTTGGGAAAGTGGCCATGGTGCTGAGAAGAGCTGCG
CGGCAGACGAGGGTCGGGGAGAATGTGAGAGAGATGGGGAAGTTTGTTAG
TTGGGGGCGAATTCCGCCTTTGCTCTCTACATAGCGTATGCCGTATTCAT
CAGGGTGATCGGGATTGGTTTAGTGCCGTGTTCTGTTCTCTCACGGATAG
CTCCCCTTTCCAACTGAAATTGTGTATTTTCCTGAGACACGAATGGTTAT
TTTGAAGTAAGCGATTGCTATCCCCCCCCCCTCCCGCCACAAGCAATAAA
AATGGCGGGCTTGCCAACCACCACCAGGATTCCATTTTCTCCCTGCAGGC
GATCACGTATGCTCCGCTCCACTAGGTGTCTGTCTATGGTATCAAACACG
ACGTCCTCAAAGGTAAACCGTTGTCCAACACGTGTCCGATTTTTGAGTCA
GCTACGAATATGTATCATTTGATTAGTCAACAGCACCCCTCTACCTCACC
CCCCGTACCGATCCACCGGCCCTCCAACCCATCCCAACCCCAACCTCATC
CCACCGCCAACGCCAACCCACCGACCCACCCATCCCACCTTGTCCTTGAA
CCAGATCTGTCGCAAGGTAGCTGCCTCGCTTCGAGGACACGATGTCTCAT
GCCCGGAAATGTCTGAGGAACTCTTGTATTGTGGAATAGAAGAAAAGAAG
CGCCTCGAACATCGAACGTTTGAGGCGTTGGCAGCCCTGGACACACCACC
AGACAACACTACGACAATCGCAGCAGCAGCAGCAGCAACAGCAGCAGCAG
CAGATCCCGTAGACGCTTCACAAGGATTGGTCGCCGCTGTGGCGCCGTCA
GGGGAGGGAGGGGGACGAACGGACCGGCTGCATCGGGTGGCGGACCTAAT
CAGATTCTCGAGCGGCATGGGAGAGGATGTTGAGAGTCCGGTTTTGCTGA
ACGGTGCATTGGAGATGCTCGTGGCTGCGCTGGTGGTGCTGCCTCGAGGA
GACGTCGAGGGTGCTGTGCGTTGCGTGGGGTGAGTGAAGAAGTTAAGGGA
AGGGAAAGAGTGGGTGGTGCCGGGAGGGGGGGGCATTCATACCTTAGTTT
ATGTGTCCCAAGTTTTCACCCCCCAGACAAATACGAATACTTGGCGTATT
CACCATGATAAGCATGAGGTATTTGCTTGAGTTTTAGAATGAGCGGACAC
ATAAAATACCCGCCCCTGTCCATTCGATCTACGAGTATTATTAGCAGTCG
TGGATGGTCCGGGGCACATAAAATACACGTGCTCATTCTGAAACTTTGGC
GAATACTTTCTAATTTTCGTGGCGACTACGCAAATTGTGAGTGCAGTGAA
TTACATGTGAGAGGGAGGACGGTGGATTGGTGGCATCTTGGCGTGCTTGT
TAGTAGCCTGAGCTCTACTGCTGTTTAAGGGGATACAGCAGCTTTGTCAG
ATAACTCGTCTGAACGCCATGGTGTCAAATAGTTGGACGTGACAGAAGAT
TTGCTGTTTGTGCCGTTTCAAAAGTACCGCTGTTCTGCTGCGTATATGGT
CGTGTGCCGTTGAGTATTTTCTTGTTGACACTGCGAAGCAACAGTACCTG
CTCTTGGACATTATCACCACCATCTTCGCCGACCGATGATGTCTGGCCAC
CTCTATAGCCCAAACGTACGCGAACGCTCCATACCAATGACGATCACACG
CACTCTCACTCATTTACGTTCCCCACTTTCCCGATTTACTGATGACCCTA
CCCTGGACACCCCCGCCCCCGCGCGCGTTGAAAATTCCAATTCTGTCGAC
CGCCCTTCACTTTGAAAACTACCTACTACCCCCACGCGAAACACAAATGA
ACACACAAAAAATAGGACCTTCTGCCTAGTGCGGGTGCTGCAAGTTCTAG
TCGGCTCTAATTTCCGCGCCACCGCGCCGCTGCGCCTTGACGGTTCTGGA
CTACTCATCGGCACCGAGCCTTCCTCTTCGTGCCAAGGCAACACCGCCGC
AGCAGGCACCGCCGATACTACCACCTGTCACAACGGCAACGGCGACCCCC
CCGGCGGTGCCGCTTCCCCCACCGCCGCCATCACCGCCGCGGCGCCGAGA
GAGGCAAGCGGTGGCGAGCGGGGAGGGGTAGCTCGGGACGCCCAGGATGC
TGGAGTGGGCAAGAGTGGTAAGATGAGCGTGGAAGAACAAGGAGCAATGA
ACCCAGAACATGCGGGGAGGCTCGATCATGATGTGCAGGATAAGCGGAGG
GATCATGATGGTAGCGGTCGCGGCGGAAGGATGGTGACAAGCGCGGCAGA
GATAGCCGCGCTGTTCCATGATGATGGTAGTGACGAGGGCGGCGCTGGTA
TGATGGCGGTGGACCAGTCGTGTTCCTCGAGCTTTGTTCTGGCAGCCGCA
GGTCGTGGTCCGGGGGTCTCCGAATCCGATCATCGTTTCGTGTTGATCGG
CAGGGCGGGGGGCAGAGCACCAGCGGCAGTGGCAGCGGTGCCGGCGACTA
TGGGCGGTGGAGCAAAAATCGGAGGATCGAAGGGTGGTAATGATAATGGT
GATGATGGCGGCGAGGGTGGAGTCGTCGTTGACCGTCGTGATCGGTACGT
TAGGCTGGCGGCCGGACATGTGACTGCTTTTCTGCGAGCCGCGCTAATGC
TGGTAGAGGTGTGCTTGGGATCAGAGGAGGAGAAGGGGGACGCTGTAAAC
CTGACAGCGGCGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig8422:364..6378- >mRNA_H-paniculata_contig8422.16427.1 ID=mRNA_H-paniculata_contig8422.16427.1|Name=mRNA_H-paniculata_contig8422.16427.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3144bp|location=Sequence derived from alignment at H-paniculata_contig8422:364..6378- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGGCGAGGAAAACGGCCGCTCAGAAGCGAATGATGGACATGATGGA
GCAGAAGGCGAAAGCTTTTGCGTTGGTCATGGACGGTATGGACGAAAGCT
CTGAGGAGGAAAATGATAATATTGATGAGAAGGAGAAGCCAGATGAAGAG
AATGTTTATGGTGCTAGCAGCCATCGTCGCGGTATCTACTATGCTGCCGA
TATTGATAGAAGTGATGCAACGTCGGCGTCGGGCTTTGTTGATGAGAATG
ACGGCAGCGGCACGGGCACTGTCGCTGGTGGGTTTTCCGTGGAAGGAGGC
AATGGAGAACCAGGAGCGGATAGTGCTCTTGTTGGCCAAGGTGGTGGTGG
CGGTGGTAGTGGTACAGCTGGACGTCGACGGAGCGCTGGCGGTCTGAGAA
GGGCGTCTTCGGTTGGAGCGGGAGCGCCTGTGTGTATCGTATGTCGCGAG
GTGACGGATGCGGCTCTGGGTTACATCGGGTACGGGCAGAGGTCTTGCGT
CCTGGACGTGGGGACGGAGGAAGGGCGGTGGGGATCGCCGCCAGTGCACT
TGCAGATGAAGGCGAGGAAAACGGCCGCTCAGAAGCGAATGATGGACATG
ATGGAGCAGAAGGCGAAAGCTTTTGCGTTGGTCATGGACGGTATGGACGA
AAGCTCTGAGGAGGAAAATGATAATATTGATGAGAAGGAGAAGCCAGATG
AAGAGAATGTTTATGGTGCTAGCAGCCATCGTCGCGGTATCTACTATGCT
GCCGATATTGATAGAAGTGATGCAACGTCGGCGTCGGGCTTTGTTGATGA
GAATGACGGCAGCGGCACGGGCACTGTCGCTGGTGGGTTTTCCGTGGAAG
GAGGCAATGGAGAACCAGGAGCGGATAGTGCTCTTGTTGGCCAAGGTGGT
GGTGGCGGTGGTAGTGGTACAGCTGGACGTCGACGGAGCGCTGGCGGTCT
GAGAAGGGCGTCTTCGGTTGGAGCGGGAGCGCCTGTGTGTATCGTATGTC
GCGAGGTGACGGATGCGGCTCTGGGTTACATCGGGTACGGGCAGAGGTCT
TGCGTCCTGGACGTGGGGACGGAGGAAGGGCGGTGGGGATCGCCGCCAGT
GCACTTGCAGTTTTGTGGTCACGCATTGCACTACCCGTGCTTCGAGAAGT
ACTTCGCGACGGTGGTGCAGGCGTCGGACATGTACACGAACCGGGCGCTC
GACGTGGACAAGGGAGAGTTCCACTGCCCCCTGTGCAAGACCGTGGGTAA
CTTGATGGTGCCGTACGGGATGGTGGAAGCTACGACGATGCCGACAAGAG
GCAAAGAGGGAGGAGGGGAGAGGCGGGGGGAAGAGGCGGGAGGAGGCCGG
ATTCCTATGGAAGCAGAGGGGAAGCAGCAACAGCAGTTTTGTGGTCACGC
ATTGCACTACCCGTGCTTCGAGAAGTACTTCGCGACGGTGGTGCAGGCGT
CGGACATGTACACGAACCGGGCGCTCGACGTGGACAAGGGAGAGTTCCAC
TGCCCCCTGTGCAAGACCGTGGGTAACTTGATGGTGCCGTACGGGATGGT
GGAAGCTACGACGATGCCGACAAGAGGCAAAGAGGGAGGAGGGGAGAGGC
GGGGGGAAGAGGCGGGAGGAGGCCGGATTCCTATGGAAGCAGAGGGGAAG
CAGCAACAGCAGGCGATACCCTGCGCGGGTTGGCATGAAACCAAGGCGGC
GTCTTCCCTCGAAAAAGCCCTTGCAACAGTGCTACCGCCATCAAGTCTAA
CAACAAGATCGGCATTAGCAGGAGAAAGAAGGCCACGTGGAAGGTTGCTA
TCTGAATATTACCCACCCTTCCAGCCGTCTGTCAAGAAGTTTCTGGAGGC
GATACCCTGCGCGGGTTGGCATGAAACCAAGGCGGCGTCTTCCCTCGAAA
AAGCCCTTGCAACAGTGCTACCGCCATCAAGTCTAACAACAAGATCGGCA
TTAGCAGGAGAAAGAAGGCCACGTGGAAGGTTGCTATCTGAATATTACCC
ACCCTTCCAGCCGTCTGTCAAGAAGTTTCTGGAGTCGATTAATGAACTGG
AGTCGAGTCGATCTTCCGCCAGCTCCCGCGCCTGTCCCGAACAGCTATTC
ATAGGGGGCTGCCGTGCCCTGGCATACTCGGCCAGTGCAGCGACTGCAGT
GACTATGACAGAAGACAGCACCGGTGGCGGCGGCCATGGCGAGGGTGGCG
GGGGCAGCTGGGCAGACGAAGTGGGCGATGCCGGAGATGTTTCTCGGAGG
CGTTATCTTGGGAAAGTGGCCATGGTGCTGAGAAGAGCTGCGCGGCAGAC
GAGGGTCGGGGAGAATTCGATTAATGAACTGGAGTCGAGTCGATCTTCCG
CCAGCTCCCGCGCCTGTCCCGAACAGCTATTCATAGGGGGCTGCCGTGCC
CTGGCATACTCGGCCAGTGCAGCGACTGCAGTGACTATGACAGAAGACAG
CACCGGTGGCGGCGGCCATGGCGAGGGTGGCGGGGGCAGCTGGGCAGACG
AAGTGGGCGATGCCGGAGATGTTTCTCGGAGGCGTTATCTTGGGAAAGTG
GCCATGGTGCTGAGAAGAGCTGCGCGGCAGACGAGGGTCGGGGAGAATAT
CTGTCGCAAGGTAGCTGCCTCGCTTCGAGGACACGATGTCTCATGCCCGG
AAATGTCTGAGGAACTCTTGTATTGTGGAATAGAAGAAAAGAAGCGCCTC
GAACATCGAACATCTGTCGCAAGGTAGCTGCCTCGCTTCGAGGACACGAT
GTCTCATGCCCGGAAATGTCTGAGGAACTCTTGTATTGTGGAATAGAAGA
AAAGAAGCGCCTCGAACATCGAACCAGCAGCAGCAGCAACAGCAGCAGCA
GCAGATCCCGTAGACGCTTCACAAGGATTGGTCGCCGCTGTGGCGCCGTC
AGGGGAGGGAGGGGGACGAACGGACCGGCTGCATCGGGTGGCGGACCTAA
TCAGATTCTCGAGCGGCATGGGAGAGGATGTTGACAGCAGCAGCAGCAAC
AGCAGCAGCAGCAGATCCCGTAGACGCTTCACAAGGATTGGTCGCCGCTG
TGGCGCCGTCAGGGGAGGGAGGGGGACGAACGGACCGGCTGCATCGGGTG
GCGGACCTAATCAGATTCTCGAGCGGCATGGGAGAGGATGTTGA back to top
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