prot_H-paniculata_contig8417.16423.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8417.16423.1
Unique Nameprot_H-paniculata_contig8417.16423.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
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BLAST of mRNA_H-paniculata_contig8417.16423.1 vs. uniprot
Match: D7FLX3_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX3_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 2.060e-10
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0 
Query:   12 EAEPMHRRALEIAQKTVGSGHPAAASSLHGLGVLAQARG 50
            EAEP+H+RAL+IA+ T G GHP AA SLHGL VLAQARG
Sbjct:    2 EAEPLHKRALDIARSTTGPGHPTAAYSLHGLAVLAQARG 40
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8417.16423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLX3_ECTSI2.060e-1074.36TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 5..52
e-value: 5.4E-13
score: 49.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 2..53
e-value: 8.9E-13
score: 50.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 6..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8417contigH-paniculata_contig8417:4816..4974 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8417.16423.1mRNA_H-paniculata_contig8417.16423.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8417 4816..4974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8417.16423.1 ID=prot_H-paniculata_contig8417.16423.1|Name=mRNA_H-paniculata_contig8417.16423.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
MVYPCVQGRLEEAEPMHRRALEIAQKTVGSGHPAAASSLHGLGVLAQARG
DHV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf