prot_H-paniculata_contig8407.16415.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8407.16415.1
Unique Nameprot_H-paniculata_contig8407.16415.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length326
Homology
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BLAST of mRNA_H-paniculata_contig8407.16415.1 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 6.450e-20
Identity = 75/233 (32.19%), Postives = 104/233 (44.64%), Query Frame = 0 
Query:   94 RNLRLSTAKDVKDVVESQKTMLETVVIIGDQVQEMRRLEPHQSSQLRGLARELAGLTVRIPSYAVLLPPRRDESQVLTEDERGEPNWIERLKTW-------------------YGKDKKAGKGMATKEFRLFFLCGHDRSLAECGLDGKGYRIATHRKWVTKCLPFAKALLVVVNIALRSLAGLSIPIEGISGVGGQSLDEVLASMVEDTEEVLTDNACSAGVQRLDEAHATG 307
            R L  +T K V  V +  +  L    + G        L P +   L G+ARE+A L   IP +  +LP R      L+E +R    W   LK W                    G +K   +G+ T+E RLFFLCG D+SLAECG DG+GY +     WV K  P AK  L + +IAL+   GL++  +      G S D  +++ VED      +   S    RLD    +G
Sbjct:  839 RKLNETTMKVVAGVEQVVQANLSNAAVAG--------LRPTERDILVGVAREVAILRWPIPRFVCVLPARDTR---LSESDRSFEKWSTALKEWCASKSPAKDAKNPNRKTSILGLNKPQLRGLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKAAPAAKIGLALASIALKVCTGLAVSTDTFEAAFGTSED--MSAFVEDALSAGIEGTTSKAGNRLDRLQNSG 1058
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8407.16415.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUH6_ECTSI6.450e-2032.19LRR-GTPase of the ROCO family, incomplete sequence... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8407contigH-paniculata_contig8407:192..2059 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8407.16415.1mRNA_H-paniculata_contig8407.16415.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8407 191..2059 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8407.16415.1 ID=prot_H-paniculata_contig8407.16415.1|Name=mRNA_H-paniculata_contig8407.16415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=326bp
AGILASELLEVDDINAPVGEVFQRVVGRVSESQRARLSSCGNANSTNSRG
AAHSRANNDDILEKILEQLKEILHRVQPCSFIIDEVKNVTANLRNLRLST
AKDVKDVVESQKTMLETVVIIGDQVQEMRRLEPHQSSQLRGLARELAGLT
VRIPSYAVLLPPRRDESQVLTEDERGEPNWIERLKTWYGKDKKAGKGMAT
KEFRLFFLCGHDRSLAECGLDGKGYRIATHRKWVTKCLPFAKALLVVVNI
ALRSLAGLSIPIEGISGVGGQSLDEVLASMVEDTEEVLTDNACSAGVQRL
DEAHATGENLEQSTLADGSEGVDNSN
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