prot_H-paniculata_contig8396.16402.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig8396.16402.1
Unique Name	prot_H-paniculata_contig8396.16402.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	212

Homology

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BLAST of mRNA_H-paniculata_contig8396.16402.1 vs. uniprot
Match: D7G5V8_ECTSI (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5V8_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 1.450e-92
Identity = 161/212 (75.94%), Postives = 173/212 (81.60%), Query Frame = 0

Query:    1 MKTVFPWLLIACAVKSASAFAPIAQQTLRPTPRPHGWRKAVSMPSDPQXXXXXXXXXXXXXRRTPVPMPTVGEGRDQMDVISRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGSSGKRKSLPNSRIMIHQPLGGAAGQAADIEIQVTHPKLWSNRLRN 212
            MK    ++L AC    ASAF P    + R   +    + A SMP++PQ  XXXXXX     RRTPVPMPTVGEG +QMDV+SRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGS+GKRKSLPNSRIMIHQPLGGAAGQAADIEIQ     L++ RL N
Sbjct:    1 MKRTLFYMLGACIGSHASAFVPAVPLSRRAIVQQRCLQHAQSMPTEPQPEXXXXXXVPP--RRTPVPMPTVGEGSEQMDVMSRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGSAGKRKSLPNSRIMIHQPLGGAAGQAADIEIQAKEI-LFTKRLLN 209

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BLAST of mRNA_H-paniculata_contig8396.16402.1 vs. uniprot
Match: A0A836C9E3_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9E3_9STRA)

HSP 1 Score: 253 bits (646), Expect = 1.990e-82
Identity = 127/138 (92.03%), Postives = 132/138 (95.65%), Query Frame = 0

Query:   62 RRTPVPMPTVGEGRDQMDVISRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGSSGKRKSLPNSRIMIHQPLGGAAGQAADIEIQ 199
            RRTPV MPTVGEG+DQMDV+SRLLKDRILLLG EVNDEVGNV+VAQLLYLA  DPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAG+ GKRKSLPN+RIMIHQPLGGA GQAADIEIQ
Sbjct:   15 RRTPVNMPTVGEGKDQMDVVSRLLKDRILLLGSEVNDEVGNVMVAQLLYLAQSDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGAQGKRKSLPNARIMIHQPLGGAQGQAADIEIQ 152

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BLAST of mRNA_H-paniculata_contig8396.16402.1 vs. uniprot
Match: A0A7S2SET8_9STRA (ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SET8_9STRA)

HSP 1 Score: 238 bits (608), Expect = 2.410e-76
Identity = 122/147 (82.99%), Postives = 132/147 (89.80%), Query Frame = 0

Query:   66 VPMPTVGEGRDQMDVISRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGSSGKRKSLPNSRIMIHQPLGGAAGQAADIEIQVTHPKLWSNRLRN 212
            VP+P+VGEG+DQ DV+SRLLKDRILLLG EVNDEV NVLVAQLLYLAN+DP K+ITLYINSPGGSVSAGLAIYDTMQFIPCDV TVCFGMAASMGAFLLGAG+ GKR SLPN+RIMIHQPLGGAAGQAADIEIQ     L++  L N
Sbjct:   54 VPLPSVGEGKDQKDVLSRLLKDRILLLGSEVNDEVANVLVAQLLYLANEDPYKEITLYINSPGGSVSAGLAIYDTMQFIPCDVRTVCFGMAASMGAFLLGAGAQGKRASLPNARIMIHQPLGGAAGQAADIEIQAKEI-LYTKELLN 199

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BLAST of mRNA_H-paniculata_contig8396.16402.1 vs. uniprot
Match: D8LGQ4_ECTSI (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGQ4_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 8.020e-74
Identity = 128/195 (65.64%), Postives = 144/195 (73.85%), Query Frame = 0

Query:   13 AVKSASAFAPIAQQT----LRPTPRPHGWRK-AVSM---PSDPQXXXXXXXXXXXXXRRTPVPMPTVGEGRDQMDVISRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGSSGKRKSLPNSRIMIHQPLGGAAGQAADIEIQ 199
            A++  S+    A+ T    ++  P P  W   +VSM   P DP                 PV MP V  G  QMDVISRLLKDRILLLGQ+VNDEV NVLVAQLLYLANDDP+KDITLYINSPGGSVSAG+AIYD MQ++PCDV+TVCFG AASMGAFLLGAG+ GKR+SLPN+RIMIHQPLGGA GQAADIEIQ
Sbjct:   28 ALRQRSSHGAAARATSALSMKAGPNPKTWYPHSVSMMPSPDDPPEVDPRRKDPDRPAEAPPVRMPVVDVGGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDPDKDITLYINSPGGSVSAGMAIYDAMQYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQAADIEIQ 222

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BLAST of mRNA_H-paniculata_contig8396.16402.1 vs. uniprot
Match: A0A8J2T3N8_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T3N8_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.390e-73
Identity = 118/136 (86.76%), Postives = 127/136 (93.38%), Query Frame = 0

Query:   65 PVPMPTV-GEGRDQMDVISRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGSSGKRKSLPNSRIMIHQPLGGAAGQAADIEIQ 199
            PV MPTV G   +Q+DV+SRLLKDRILLLG EVNDEVGNVLVAQ+LYLAN+DPE DITLYINSPGGSVSAG+AIYDTMQFIPCDV+TVCFGMAASMGAFLLGAG+ GKRKSLPN+RIMIHQPLGGA GQAADIEIQ
Sbjct:   63 PVIMPTVTGSNGEQIDVVSRLLKDRILLLGSEVNDEVGNVLVAQMLYLANEDPEADITLYINSPGGSVSAGMAIYDTMQFIPCDVSTVCFGMAASMGAFLLGAGAKGKRKSLPNARIMIHQPLGGAQGQAADIEIQ 198

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BLAST of mRNA_H-paniculata_contig8396.16402.1 vs. uniprot
Match: A0A7S2JVK3_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JVK3_9STRA)

HSP 1 Score: 231 bits (588), Expect = 4.490e-73
Identity = 117/133 (87.97%), Postives = 123/133 (92.48%), Query Frame = 0

Query:   67 PMPTVGEGRDQMDVISRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGSSGKRKSLPNSRIMIHQPLGGAAGQAADIEIQ 199
            P+PTV     Q+DVISRLLKDRILLLG +VNDEV NVLVAQLLYLAN+DPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDV TVCFGMAASMGAFLLGAG+ GKRKSLPN+RIMIHQPLGGA GQAADIEIQ
Sbjct:   58 PLPTVDGQSGQLDVISRLLKDRILLLGTDVNDEVANVLVAQLLYLANEDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVQTVCFGMAASMGAFLLGAGAKGKRKSLPNARIMIHQPLGGAQGQAADIEIQ 190

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BLAST of mRNA_H-paniculata_contig8396.16402.1 vs. uniprot
Match: A0A7S4EKY3_9STRA (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A7S4EKY3_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.280e-72
Identity = 128/196 (65.31%), Postives = 142/196 (72.45%), Query Frame = 0

Query:   11 ACAVKSASAFAPIAQQT------LRPTPRPHGWRKAVSMPSDPQXXXXXXXXXXXXXR-RTPVPMPTVGEGRDQMDVISRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGSSGKRKSLPNSRIMIHQPLGGAAGQAADIEIQ 199
            A AV     FAPI   T      +R +P    W   V MP +P                  PV MP +     QMDV+SRLLKDRILLLGQ V+DEV NVLVAQLLYLAN+DPEKDITLYINSPGGSVSAG+AIYDTMQ++PCDV+TVCFGMAASMGAFLLGAG+ GKR++LPNSRIMIHQPLGGA GQAADIEIQ
Sbjct:   11 ATAVAFCEGFAPITSSTRQSSTAVRISPAMGPW---VMMPDEPAPEVDPRRRDPDDQPPANPVRMPVIDTDAGQMDVLSRLLKDRILLLGQGVDDEVANVLVAQLLYLANEDPEKDITLYINSPGGSVSAGMAIYDTMQYVPCDVSTVCFGMAASMGAFLLGAGAKGKRRALPNSRIMIHQPLGGAQGQAADIEIQ 203

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BLAST of mRNA_H-paniculata_contig8396.16402.1 vs. uniprot
Match: A0A1Z5K1J4_FISSO (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1J4_FISSO)

HSP 1 Score: 229 bits (585), Expect = 1.360e-72
Identity = 127/196 (64.80%), Postives = 147/196 (75.00%), Query Frame = 0

Query:    5 FPWLLIACAVKSASAFAPIAQQTLRPTPRPHGWRKAVSMPSDPQXXXXXXXXXXXXXRRT-PVPMPTVGEGRDQMDVISRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGSSGKRKSLPNSRIMIHQPLGGAAGQAADIEIQ 199
            F  LL+  A  + SA++P  Q ++  +     W     MP +PQ               T PV MP +   + QMDVISRLLKDRILLLGQ V+DEV NVLVAQLLYLAN+DP+KDITLYINSPGGSVSAG+AIYDTMQ++PCDV+TVCFGMAASMGAFLLGAG+ GKR++LPNSRIMIHQPLGGA GQAADIEIQ
Sbjct:    4 FATLLLPIATSAFSAYSP--QSSIVNSMISSKW---TMMPDEPQPEVDPRRKDPDDKPPTNPVRMPMIDTEKGQMDVISRLLKDRILLLGQGVDDEVANVLVAQLLYLANEDPKKDITLYINSPGGSVSAGMAIYDTMQYVPCDVSTVCFGMAASMGAFLLGAGAKGKRRALPNSRIMIHQPLGGAQGQAADIEIQ 194

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BLAST of mRNA_H-paniculata_contig8396.16402.1 vs. uniprot
Match: A0A7S1E2R9_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E2R9_9STRA)

HSP 1 Score: 228 bits (582), Expect = 2.050e-72
Identity = 116/135 (85.93%), Postives = 123/135 (91.11%), Query Frame = 0

Query:   65 PVPMPTVGEGRDQMDVISRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGSSGKRKSLPNSRIMIHQPLGGAAGQAADIEIQ 199
            P P+PTV     Q+DVISRLLKDRILLLG +VNDEV NVLVAQLLYLAN+DP+KDITLYINSPGGSVSAGLAIYDTMQFIPCDV TVCFGMAASMGAFLLGAG+ GKRKSLPN+RIMIHQPLGGA G AADIEIQ
Sbjct:   39 PPPLPTVDGQSGQLDVISRLLKDRILLLGTDVNDEVANVLVAQLLYLANEDPDKDITLYINSPGGSVSAGLAIYDTMQFIPCDVQTVCFGMAASMGAFLLGAGARGKRKSLPNARIMIHQPLGGAQGAAADIEIQ 173

[Close]

BLAST of mRNA_H-paniculata_contig8396.16402.1 vs. uniprot
Match: A0A7S3NLA1_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLA1_9STRA)

HSP 1 Score: 229 bits (584), Expect = 2.190e-72
Identity = 117/161 (72.67%), Postives = 130/161 (80.75%), Query Frame = 0

Query:   39 KAVSMPSDPQXXXXXXXXXXXXXRRTPVPMPTVGEGRDQMDVISRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGSSGKRKSLPNSRIMIHQPLGGAAGQAADIEIQ 199
            + + M S+P+                PV MP V  G  QMDVISRLLKDRILLLGQ+VNDEV NVLVAQLLYLAN+DP KDITLY+NSPGGSVSAG+AIYD MQF+PCDVATVCFG AASMGAFLLGAG+ GKR++LPN+RIMIHQPLGGA GQAADIEIQ
Sbjct:   36 RRIKMMSEPEPEVDPRRRDPDTKPVPPVRMPVVDSGDGQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANEDPTKDITLYVNSPGGSVSAGMAIYDAMQFVPCDVATVCFGTAASMGAFLLGAGARGKRRALPNARIMIHQPLGGAQGQAADIEIQ 196

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig8396.16402.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig8396.16402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G5V8_ECTSI	1.450e-92	75.94	ATP-dependent Clp protease proteolytic subunit n=2...	[more]
A0A836C9E3_9STRA	1.990e-82	92.03	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A7S2SET8_9STRA	2.410e-76	82.99	ATP-dependent Clp protease proteolytic subunit (Fr...	[more]
D8LGQ4_ECTSI	8.020e-74	65.64	ATP-dependent Clp protease proteolytic subunit n=2...	[more]
A0A8J2T3N8_9STRA	1.390e-73	86.76	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A7S2JVK3_9STRA	4.490e-73	87.97	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A7S4EKY3_9STRA	1.280e-72	65.31	ATP-dependent Clp protease proteolytic subunit n=2...	[more]
A0A1Z5K1J4_FISSO	1.360e-72	64.80	ATP-dependent Clp protease proteolytic subunit n=2...	[more]
A0A7S1E2R9_9STRA	2.050e-72	85.93	ATP-dependent Clp protease proteolytic subunit n=1...	[more]
A0A7S3NLA1_9STRA	2.190e-72	72.67	ATP-dependent Clp protease proteolytic subunit n=1...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 171..190 score: 61.62 coord: 79..94 score: 49.84 coord: 150..167 score: 64.58 coord: 119..139 score: 68.69
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 75..202 e-value: 2.2E-55 score: 187.4
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 53..201
None	No IPR available	GENE3D	3.90.226.10		coord: 57..212 e-value: 2.9E-53 score: 182.5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..212
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.826
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 172..185
IPR018215	ClpP, Ser active site	PROSITE	PS00381	CLP_PROTEASE_SER	coord: 150..161
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 76..209

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig8396	contig	H-paniculata_contig8396:8939..9704 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig8396.16402.1	mRNA_H-paniculata_contig8396.16402.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig8396 8939..9704 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig8396.16402.1 ID=prot_H-paniculata_contig8396.16402.1|Name=mRNA_H-paniculata_contig8396.16402.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=212bp
MKTVFPWLLIACAVKSASAFAPIAQQTLRPTPRPHGWRKAVSMPSDPQPE
PQPDPNQPTPPRRTPVPMPTVGEGRDQMDVISRLLKDRILLLGQEVNDEV
GNVLVAQLLYLANDDPEKDITLYINSPGGSVSAGLAIYDTMQFIPCDVAT
VCFGMAASMGAFLLGAGSSGKRKSLPNSRIMIHQPLGGAAGQAADIEIQV
THPKLWSNRLRN

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001907	ClpP
IPR023562	ClpP/TepA
IPR033135	ClpP_His_AS
IPR018215	ClpP_Ser_AS
IPR029045	ClpP/crotonase-like_dom_sf