prot_H-paniculata_contig8372.16387.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8372.16387.1
Unique Nameprot_H-paniculata_contig8372.16387.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length236
Homology
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BLAST of mRNA_H-paniculata_contig8372.16387.1 vs. uniprot
Match: D7FS65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS65_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 6.070e-77
Identity = 109/142 (76.76%), Postives = 124/142 (87.32%), Query Frame = 0 
Query:   93 PARFVLCGDDTGRGIDYGIMNKGSWKTLEQYCEKWGIKQAHLDSIYARFERTIIRTEHLDFTSKPQFHASLDFLADQFMATSGEFAAQLFIQTWFLRHERGLLPPKDRRCVDFARLVIMCCDLARMGDYELLATLWGCVLHR 234
            P +FVL GDDTG GI+Y I++  SW+ LE YC+KWGIKQAHL+SIY+RF RTIIRTEHLDFT KPQ+HASLDFLAD+FM T+GEFAAQ+FIQTWFLR +RGL PP+DRRCVDF RLVIMC DLAR+GDYELL  LW CVLHR
Sbjct:   35 PQKFVLAGDDTGSGIEYNILDPESWQKLEHYCKKWGIKQAHLESIYSRFARTIIRTEHLDFTLKPQYHASLDFLADEFMTTAGEFAAQIFIQTWFLRRKRGLAPPQDRRCVDFTRLVIMCSDLARLGDYELLINLWACVLHR 176
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BLAST of mRNA_H-paniculata_contig8372.16387.1 vs. uniprot
Match: A0A836C822_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C822_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.320e-28
Identity = 57/123 (46.34%), Postives = 76/123 (61.79%), Query Frame = 0 
Query:  111 IMNKGSWKTLEQYCEKWGIKQAHLDSIYARFERTIIRTEHLDFTSKPQFHASLDFLADQFMATSGEFAAQLFIQTWFLRHERGLLPPKDRRCVDFARLVIMCCDLARMGDYELLATLWGCVLH 233
            +++   W+ L +YC + G  +  +++I+ARF RT+   EH DFT K   HASLDF+ D+F  T GEF AQL +QTW+ +    L P  DRR  DFARLVI+ CDLA M + ELL   W   L 
Sbjct:    1 MLDDDQWQLLAEYCNERGFGKREVEAIHARFARTLNSEEHSDFTKKKIHHASLDFIQDEFYNTGGEFVAQLLLQTWYQQPHAMLAPQSDRRQFDFARLVILSCDLADMSNAELLTAFWASALQ 123
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8372.16387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FS65_ECTSI6.070e-7776.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C822_9STRA2.320e-2846.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..236
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.965
NoneNo IPR availableTMHMMTMhelixcoord: 4..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8372contigH-paniculata_contig8372:344..2600 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8372.16387.1mRNA_H-paniculata_contig8372.16387.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8372 344..2600 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8372.16387.1 ID=prot_H-paniculata_contig8372.16387.1|Name=mRNA_H-paniculata_contig8372.16387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
ALILLLLLLLLLLLLWAANIELWRAQYNRLNKKRDSEGRLLPTALPTMVG
DKRDEGHHSSTISSSKKRRGNNRGLSAGEGSGDDDRTKELEEPARFVLCG
DDTGRGIDYGIMNKGSWKTLEQYCEKWGIKQAHLDSIYARFERTIIRTEH
LDFTSKPQFHASLDFLADQFMATSGEFAAQLFIQTWFLRHERGLLPPKDR
RCVDFARLVIMCCDLARMGDYELLATLWGCVLHRQV
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