prot_H-paniculata_contig8333.16349.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8333.16349.1 vs. uniprot
Match: A0A6H5JVC8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVC8_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 1.250e-9 Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 0
Query: 2 APGYEEFDE-NEVPVVMRLVKSIYSLRQSPSNWWGNIGKLLAEFGFKSFKSDPCVYVY 58
A GYE DE +P+VM+L KS+Y L+QSP N+ K + E GF + SDPCVYVY
Sbjct: 122 AKGYEITDEVTGLPLVMKLKKSLYGLKQSPRNFGNAFAKGIKEIGFTALLSDPCVYVY 179
BLAST of mRNA_H-paniculata_contig8333.16349.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 2.370e-9 Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 0
Query: 2 APGYEEFDE-NEVPVVMRLVKSIYSLRQSPSNWWGNIGKLLAEFGFKSFKSDPCVYVY 58
A GYE DE +P+VM+L KS+Y L+QSP N+ K + E GF + SDPCVYVY
Sbjct: 1018 AKGYEITDEVTGLPLVMKLKKSLYGLKQSPRNFGNAFAKGIKEIGFTALLSDPCVYVY 1075
BLAST of mRNA_H-paniculata_contig8333.16349.1 vs. uniprot
Match: A0A6H5L4S3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4S3_9PHAE) HSP 1 Score: 58.2 bits (139), Expect = 6.210e-9 Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 0
Query: 2 APGYEEFDE-NEVPVVMRLVKSIYSLRQSPSNWWGNIGKLLAEFGFKSFKSDPCVYVY 58
A GYE DE +P+VM+L KS+Y L+QSP N+ + K + + GF + SDPCV VY
Sbjct: 21 AKGYEIMDEVTGLPLVMKLKKSLYGLKQSPRNFGNAVAKGIKDIGFTALLSDPCVCVY 78
BLAST of mRNA_H-paniculata_contig8333.16349.1 vs. uniprot
Match: A0A6H5KFG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG1_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 8.170e-9 Identity = 30/58 (51.72%), Postives = 37/58 (63.79%), Query Frame = 0
Query: 2 APGYEEFDE-NEVPVVMRLVKSIYSLRQSPSNWWGNIGKLLAEFGFKSFKSDPCVYVY 58
A GYE DE +P+VM+L KS+Y L+QSP N+ K E GF + SDPCVYVY
Sbjct: 34 AKGYEITDEVTGLPLVMKLKKSLYGLKQSPRNFGNAFAKGNKEIGFTALLSDPCVYVY 91
BLAST of mRNA_H-paniculata_contig8333.16349.1 vs. uniprot
Match: A0A6H5KAG6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG6_9PHAE) HSP 1 Score: 53.1 bits (126), Expect = 1.240e-6 Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = 0
Query: 2 APGYEEFDENE-VPVVMRLVKSIYSLRQSPSNWWGNIGKLLAEFGFKSFKSDPCVY 56
APG+E+ + + P+V +L KS+Y LRQSPS W I K L GF SDPCVY
Sbjct: 772 APGFEKIESSTGKPLVWKLKKSLYGLRQSPSVWNLTIDKDLRGKGFTPTASDPCVY 827
BLAST of mRNA_H-paniculata_contig8333.16349.1 vs. uniprot
Match: A0A6A2ZKV9_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2ZKV9_HIBSY) HSP 1 Score: 53.1 bits (126), Expect = 1.240e-6 Identity = 22/55 (40.00%), Postives = 35/55 (63.64%), Query Frame = 0
Query: 3 PGYEEFDENEVPVVMRLVKSIYSLRQSPSNWWGNIGKLLAEFGFKSFKSDPCVYV 57
PG+E+FD + P+V +L K++Y LRQ+P NW + L E GF ++D ++V
Sbjct: 711 PGFEQFDSSGSPLVCKLNKALYGLRQTPQNWNEKLKNSLLELGFTISRADASLFV 765
BLAST of mRNA_H-paniculata_contig8333.16349.1 vs. uniprot
Match: A0A6A2Z4J8_HIBSY (Putative zinc ion binding protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2Z4J8_HIBSY) HSP 1 Score: 52.4 bits (124), Expect = 2.330e-6 Identity = 21/54 (38.89%), Postives = 35/54 (64.81%), Query Frame = 0
Query: 3 PGYEEFDENEVPVVMRLVKSIYSLRQSPSNWWGNIGKLLAEFGFKSFKSDPCVY 56
PG+E+ +E P+V +L K +Y LRQ+P NW + + L + GFK F++D ++
Sbjct: 859 PGFEQTNELGEPLVCKLKKELYGLRQAPRNWHVKLKETLVQMGFKVFRADSSLF 912
BLAST of mRNA_H-paniculata_contig8333.16349.1 vs. uniprot
Match: A0A6A3AKF3_HIBSY (Dynamin-related protein 5A n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3AKF3_HIBSY) HSP 1 Score: 52.4 bits (124), Expect = 2.340e-6 Identity = 21/55 (38.18%), Postives = 37/55 (67.27%), Query Frame = 0
Query: 3 PGYEEFDENEVPVVMRLVKSIYSLRQSPSNWWGNIGKLLAEFGFKSFKSDPCVYV 57
PG+E+ DE+ P+V +L+K++Y LRQ+P NW + + L + GF ++D ++V
Sbjct: 1730 PGFEQTDESGKPLVCKLLKALYGLRQTPRNWHIKLKESLLQLGFTVSRADSSLFV 1784
BLAST of mRNA_H-paniculata_contig8333.16349.1 vs. uniprot
Match: A0A5B6WFP4_9ROSI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Gossypium australe TaxID=47621 RepID=A0A5B6WFP4_9ROSI) HSP 1 Score: 51.6 bits (122), Expect = 4.280e-6 Identity = 22/55 (40.00%), Postives = 32/55 (58.18%), Query Frame = 0
Query: 3 PGYEEFDENEVPVVMRLVKSIYSLRQSPSNWWGNIGKLLAEFGFKSFKSDPCVYV 57
PGY ++D P+V RL K++Y LRQ+P W+ + L GF KSD ++V
Sbjct: 97 PGYVQYDSTGKPLVCRLKKALYGLRQAPRTWFEKLKSFLVSIGFIVSKSDVSLFV 151
BLAST of mRNA_H-paniculata_contig8333.16349.1 vs. uniprot
Match: A0A6A3A122_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3A122_HIBSY) HSP 1 Score: 51.2 bits (121), Expect = 5.960e-6 Identity = 18/55 (32.73%), Postives = 36/55 (65.45%), Query Frame = 0
Query: 3 PGYEEFDENEVPVVMRLVKSIYSLRQSPSNWWGNIGKLLAEFGFKSFKSDPCVYV 57
PG+E+ ++ P+V +L +++Y LRQ+P NW + L + GF + ++DP +++
Sbjct: 1032 PGFEQVADDGTPLVCKLQRALYGLRQAPRNWHAKLRANLVQIGFVASRADPSLFI 1086 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8333.16349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig8333.16349.1 ID=prot_H-paniculata_contig8333.16349.1|Name=mRNA_H-paniculata_contig8333.16349.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=59bpback to top |