prot_H-paniculata_contig8332.16347.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8332.16347.1
Unique Nameprot_H-paniculata_contig8332.16347.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length156
Homology
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BLAST of mRNA_H-paniculata_contig8332.16347.1 vs. uniprot
Match: D7FPW1_ECTSI (Sulfate permease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPW1_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 5.510e-60
Identity = 106/155 (68.39%), Postives = 124/155 (80.00%), Query Frame = 0 
Query:    1 MRFGASLTFANKDIFRRAVIKMVERSDSEACHAEKTGLSQKLPLQYVILDSSSIHDLDSSALKMLEALVALLVARQPPVEMFLAPVSDPLMVQIHKSPMLSATLGRRYFLGILPAVRYASDQIAGGMLIAPPDKYYKVMSNLSLGHTDEHQLQDI 155
            +RFGASLTFANKD+FRRAVIK+VE++D+E   AE  G   K+ LQYVILDSSSIHDLDSS+LK LE LVALLV R PP+EMFLAPVSDPLM+Q+ KSP+L ATLGRRYFL    AV YA  Q+A G L+AP   Y+KVMS++SLG+ DE  L DI
Sbjct:  369 IRFGASLTFANKDVFRRAVIKVVEKADAERRLAESQGRPPKVALQYVILDSSSIHDLDSSSLKTLEGLVALLVDRDPPIEMFLAPVSDPLMMQLRKSPLLCATLGRRYFLSTATAVTYALQQVAAGQLVAPASLYHKVMSSISLGNLDEGDLDDI 523
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BLAST of mRNA_H-paniculata_contig8332.16347.1 vs. uniprot
Match: A0A6H5L827_9PHAE (SulP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L827_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.220e-37
Identity = 106/287 (36.93%), Postives = 123/287 (42.86%), Query Frame = 0 
Query:    1 MRFGASLTFANKDIFRRAVIKMVERSDSEACHAEKTGLSQKLPLQYVILDSSSIHDLDSSALKMLEALVALLVARQPPVEMFLAPVSDPLMVQ------------------------------------------------------------------------------------------------------------------------------------IHKSPMLSATLGRRYFLGILPAVRYASDQIAGGMLIAPPDKYYKVMSNLSLGHTDEHQLQDI 155
            +RFGASLTFANKD+FRRAVIK+VE++D+E   AE  G   K+ LQYVILDSSSIHDLDSS+LK LE LVALLV R PP+EMFLAPVSDPLMVQ                                                                                                                                    + KSP+L ATLGRRYFL    AV YA  Q+A G L+A    Y+KVMS++SLG+ DE  L DI
Sbjct:  340 IRFGASLTFANKDVFRRAVIKVVEKADAERRVAESQGKPAKVALQYVILDSSSIHDLDSSSLKTLEGLVALLVDRDPPIEMFLAPVSDPLMVQESFRVVRELSPKQPFLARLVLSFTVDAVATPGDGAAVYAVCFRRCHGRSRLVSVVYARSTESFVRYSSASQHSQPGTGKKRGGWWSHGVKRKLKKTAIGASSKIYRDDFHPKLFFLFFKECCSKCQCTPGFILRKSPLLCATLGRRYFLSTATAVTYALQQVAAGQLVASASLYHKVMSSISLGNLDEGDLGDI 626
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8332.16347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPW1_ECTSI5.510e-6068.39Sulfate permease n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5L827_9PHAE1.220e-3736.93SulP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002645STAS domainPFAMPF01740STAScoord: 2..91
e-value: 4.5E-9
score: 35.9
IPR002645STAS domainPROSITEPS50801STAScoord: 1..119
score: 13.576
IPR036513STAS domain superfamilyGENE3D3.30.750.24coord: 1..122
e-value: 1.1E-14
score: 55.9
IPR036513STAS domain superfamilySUPERFAMILY52091SpoIIaa-likecoord: 3..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8332contigH-paniculata_contig8332:3671..6458 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8332.16347.1mRNA_H-paniculata_contig8332.16347.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8332 1574..7167 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8332.16347.1 ID=prot_H-paniculata_contig8332.16347.1|Name=mRNA_H-paniculata_contig8332.16347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=156bp
MRFGASLTFANKDIFRRAVIKMVERSDSEACHAEKTGLSQKLPLQYVILD
SSSIHDLDSSALKMLEALVALLVARQPPVEMFLAPVSDPLMVQIHKSPML
SATLGRRYFLGILPAVRYASDQIAGGMLIAPPDKYYKVMSNLSLGHTDEH
QLQDI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002645STAS_dom
IPR036513STAS_dom_sf