prot_H-paniculata_contig8317.16335.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8317.16335.1
Unique Nameprot_H-paniculata_contig8317.16335.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length395
Homology
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BLAST of mRNA_H-paniculata_contig8317.16335.1 vs. uniprot
Match: A0A6H5KP11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP11_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.820e-5
Identity = 39/113 (34.51%), Postives = 57/113 (50.44%), Query Frame = 0 
Query:  166 SSIHVLTPNQDDVLTSGSDYKVSWEYVGSHAEDTEIFHIDVYNCGGDSDCAGD-CGDFLAPLCE--EQGCFAIDGSNTISLPEVGDESGPYFKIAVS-ADGNSDMGCSGSFTL 274
            +++ V +P   D++ + S   V W    S       F ID+Y CG  S C  D CGD++  LC   + GC    G   + +PE  D +   +K+ V+ +   SDMGCSG FTL
Sbjct:   18 NALEVTSPAAGDMIVAASSTTVEWTGTSSGR-----FDIDLYYCG--SVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSSGYKVMVTDSSDESDMGCSGEFTL 123
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8317.16335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KP11_9PHAE1.820e-534.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8317contigH-paniculata_contig8317:1727..6793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8317.16335.1mRNA_H-paniculata_contig8317.16335.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8317 1727..6794 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8317.16335.1 ID=prot_H-paniculata_contig8317.16335.1|Name=mRNA_H-paniculata_contig8317.16335.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=395bp
VESSTATAYASASASASSTTGGENQVASSSVSATFTSPVEISYTSTTSEG
DDNNGSSSSSSSSHEGEPTSDYSQDDIDDDFEDDDVEDDDNDATDDDSES
NGGDDDDGEEYDTDDDMEVTGGSSWTVTGSDDDSREDISTSDSSDSDSSN
SGSSDDDSDSSTEMASSIHVLTPNQDDVLTSGSDYKVSWEYVGSHAEDTE
IFHIDVYNCGGDSDCAGDCGDFLAPLCEEQGCFAIDGSNTISLPEVGDES
GPYFKIAVSADGNSDMGCSGSFTLAPASTSEPSEPSEPSEPSGCSDDDTD
MFLDDSTTFSDDVNDDLDSVTDEGTTSSVAAMIVASCGDLNSIPYPLGGV
LRVTVDADEITCRDIKTLRLGGGELLISSENGVVFSGVRFDVESG
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