prot_H-paniculata_contig8314.16334.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8314.16334.1
Unique Nameprot_H-paniculata_contig8314.16334.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length236
Homology
BLAST of mRNA_H-paniculata_contig8314.16334.1 vs. uniprot
Match: D7G0M6_ECTSI (Nucleoporin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M6_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 2.970e-113
Identity = 178/237 (75.11%), Postives = 205/237 (86.50%), Query Frame = 0
Query:    1 MLPAPLARERDHVECMTFMGLLPEIDHAWMTVDNVLFLWNYHNQDFTQYRELEQVIVTVALVPPKRGVFQESVKHVLAVATTVEVVLLAVTFQGESKTT-SCRNRRIQVRPTNFRAATDGVSMLKIAGHPNGRVFMAGKDGNMYELSYSVSYGFMYSVFFVGDATGARKCKRVRHRSSGASPSPMHAMYALLGMRSAQRTLADVVVDPLRNVLYTLDLEGNMDLFDLGVDGNQTTQK 236
            MLP  L+RERD VECMTFMGLLPEIDHAWMTVDNVL+LWNYH QDFTQ+RELEQVIVTVALVPPK+GVF + V+HVLAVATTVEV+LLAVT+  + + T S RNRRIQVR TNFRA+TDGVSMLKIA HPNGRVFMAGKDGN+YEL+YSV+YGF YSVF VG    +R+C R+ H+SS   P P+++M+ALLG+R A+R L +VVVDPLRNVLYTLDL G++DLFDLG DGN TTQK
Sbjct:   72 MLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVEVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQK 308          
BLAST of mRNA_H-paniculata_contig8314.16334.1 vs. uniprot
Match: A0A7R9YE90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE90_9STRA)

HSP 1 Score: 179 bits (455), Expect = 4.190e-48
Identity = 99/243 (40.74%), Postives = 152/243 (62.55%), Query Frame = 0
Query:    2 LPAPLARERDHVECMTFMGLLPEIDHAWMTVDNVLFLWNYH------NQDFTQYRELEQVIVTVALVPPKRGVFQESVKHVLAVATTVEVVLLAVTFQGESKTTSCR-----NRRIQVRPTNFRAATDGVSMLKIAGHPNGRVFMAGKDGNMYELSYSVSYGFMYSVFFVGDATGARKCKRVRHRSSGASPSPMHAMYA--LLGMRSAQRTLADVVVDPLRNVLYTLDLEGNMDLFDLGVDGN 231
            +P  L  +   ++CM+FMGLLPEI  AW+++DN LFLWNY       + DF ++  L+Q+IV+VALVPP+ GVF+E VK++LAVAT VE+VLLAV F+    T         N  + +RPT+F  ++D V+M+K+ G  +GR+FM G DG++YE  Y+    F   +  +G     RKC+++ H     S SP+ ++    L  + +  + L DVVVD +R +LY L  + +++ +DLGV+G+
Sbjct:   31 VPPALTEQYRSLKCMSFMGLLPEISCAWLSIDNKLFLWNYERARYQTDADFLEFDGLDQIIVSVALVPPRPGVFREKVKYLLAVATAVEIVLLAVAFEEPEGTGVLGQPLGLNGTMTLRPTSFSVSSDNVTMMKLCGTNSGRIFMGGSDGSLYEALYANEEEFALGLG-LGFGMAGRKCRKLNH-----SASPLSSLVPGFLKQLSAPSKPLVDVVVDDVRQILYALREDNSLEGYDLGVNGD 267          
BLAST of mRNA_H-paniculata_contig8314.16334.1 vs. uniprot
Match: L8HDY8_ACACA (Nucleoporin, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDY8_ACACA)

HSP 1 Score: 173 bits (439), Expect = 6.060e-46
Identity = 90/229 (39.30%), Postives = 133/229 (58.08%), Query Frame = 0
Query:    2 LPAPLARERDHVECMTFMGLLPEIDHAWMTVDNVLFLWNYHNQDFTQYRELEQVIVTVALVPPKRGVFQESVKHVLAVATTVEVVLLAVTFQGESKTTSCRNRRIQVRPTNFRAATDGVSMLKIAGHPNGRVFMAGKDGNMYELSYSVSYGFMYSVFFVGDATGARKCKRVRHRSSGASPSPMHAMYALLGMRSAQRTLADVVVDPLRNVLYTLDLEGNMDLFDLGVDG 230
            LP  L +    +EC  F+GL PEI+ AW+TVDN L LWNY ++++  + + +Q+IV+V L+PPKR VF E VK+VL +AT VE+VLLAV F+  +         I + PT    + D V+M+KI G   GR+FM G DG++YEL Y    G+            +++ +++ H            M AL    SA+  + D+V+D  RN+LYTL   G ++++DLG DG
Sbjct:   96 LPETLHQMYKSIECKCFLGLFPEINRAWITVDNQLCLWNYESKEYAIWTDQDQIIVSVGLIPPKRDVFSEDVKYVLVLATPVEIVLLAVWFEDNTP-----QGEIHLEPTRIALSADNVNMVKIVGTKRGRIFMGGSDGSLYELEYQADEGWF-----------SKRARKINHTRG--------IMSALTSYWSAKPAIIDIVIDESRNILYTLSARGAIEVYDLGTDG 300          
BLAST of mRNA_H-paniculata_contig8314.16334.1 vs. uniprot
Match: A0A7S3A661_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A661_9RHOD)

HSP 1 Score: 160 bits (404), Expect = 3.290e-43
Identity = 92/229 (40.17%), Postives = 132/229 (57.64%), Query Frame = 0
Query:    2 LPAPLARERDHVECMTFMGLLPEIDHAWMTVDNVLFLWNYHN-QDFTQYRELEQVIVTVALVPPKRGVFQESVKHVLAVATTVEVVLLAVTFQGESKTTSCRNRRIQVRPTNFRAATDGVSMLKIAGHPNGRVFMAGKDGNMYELSYSVSYGFMYSVFFVGDATGARKCKRVRHRSSGAS---PSPMHAMYALLGMRSAQRTLADVVVDPLRNVLYTLDLEGNMDLFDL 226
            LP  L  +  H+EC +FMG+ PEI  AW TVDN LFLWNY    DF  +  ++Q+I + A+V P+ GVF E VK++LAV+TTVEV+LL V F G S T+      I + PT     TD V+MLK+ G    R+FMAG+DG ++EL+Y       +S+       G+RK +++ H  S  S   PS +   +      S    L D+ VD  R++L+ L   GN+ ++D+
Sbjct:   47 LPKALFEQYSHLECKSFMGIFPEIHRAWFTVDNRLFLWNYATGSDFYPFEGIDQIITSAAIVEPRPGVFVEDVKYLLAVSTTVEVMLLGVCFSGPSVTSE-----ITLVPTQISVITDNVAMLKLVGSRGRRLFMAGRDGCLHELTYQGETNSFWSL-------GSRKARKLNHSKSAFSSLIPSSVRLFF------SGDDPLIDLAVDDNRDLLFALSEYGNVTVYDI 257          
BLAST of mRNA_H-paniculata_contig8314.16334.1 vs. uniprot
Match: A0A835YRU3_9STRA (Nup133 N terminal like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU3_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.850e-42
Identity = 88/183 (48.09%), Postives = 125/183 (68.31%), Query Frame = 0
Query:    2 LPAPLARERDHVECMTFMGLLPEIDHAWMTVDNVLFLWNYHN--QDFTQYRELEQVIVTVALVPPKRGVFQESVKHVLAVATTVEVVLLAVTFQGESKTTSCRNRRIQVRPTNFRAATDGVSMLKIAGHPNGRVFMAGKDGNMYELSYSV--SYGFMYSVFFVGDATGARKCKRVRHRSSGAS 180
            LPA L   +  ++  TFMGLLPE++HAW++VDN L LWNY +      +++ELEQVIV V L  P++GVF+  VK++L VAT VEVVL+AVT  G+         R+ VRPT F A++DGV+M  I GHP GR+FMAGKDGN+YEL Y    + G++ S   +G ++G+RKC+++   ++ +S
Sbjct:   76 LPAELLDLQQRMQVATFMGLLPELNHAWLSVDNALLLWNYVDGADVVKKFQELEQVIVAVGLAVPRQGVFKPLVKYLLVVATPVEVVLVAVTDGGDG--------RLDVRPTQFSASSDGVNMNAIRGHPCGRIFMAGKDGNLYELIYEAGGATGWL-SYVGLGGSSGSRKCRKINRSTTPSS 249          
BLAST of mRNA_H-paniculata_contig8314.16334.1 vs. uniprot
Match: A0A7S3ELT5_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ELT5_9RHOD)

HSP 1 Score: 160 bits (404), Expect = 3.890e-42
Identity = 92/229 (40.17%), Postives = 132/229 (57.64%), Query Frame = 0
Query:    2 LPAPLARERDHVECMTFMGLLPEIDHAWMTVDNVLFLWNYHN-QDFTQYRELEQVIVTVALVPPKRGVFQESVKHVLAVATTVEVVLLAVTFQGESKTTSCRNRRIQVRPTNFRAATDGVSMLKIAGHPNGRVFMAGKDGNMYELSYSVSYGFMYSVFFVGDATGARKCKRVRHRSSGAS---PSPMHAMYALLGMRSAQRTLADVVVDPLRNVLYTLDLEGNMDLFDL 226
            LP  L  +  H+EC +FMG+ PEI  AW TVDN LFLWNY    DF  +  ++Q+I + A+V P+ GVF E VK++LAV+TTVEV+LL V F G S T+      I + PT     TD V+MLK+ G    R+FMAG+DG ++EL+Y       +S+       G+RK +++ H  S  S   PS +   +      S    L D+ VD  R++L+ L   GN+ ++D+
Sbjct:   47 LPKALFEQYSHLECKSFMGIFPEIHRAWFTVDNRLFLWNYATGSDFYPFEGIDQIITSAAIVEPRPGVFVEDVKYLLAVSTTVEVMLLGVCFSGPSVTSE-----ITLVPTQISVITDNVAMLKLVGSRGRRLFMAGRDGCLHELTYQGETNSFWSL-------GSRKARKLNHSKSAFSSLIPSSVRLFF------SGDDPLIDLAVDDNRDLLFALSEYGNVTVYDI 257          
BLAST of mRNA_H-paniculata_contig8314.16334.1 vs. uniprot
Match: A0A7S1C2I9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2I9_9STRA)

HSP 1 Score: 153 bits (387), Expect = 4.620e-41
Identity = 100/233 (42.92%), Postives = 136/233 (58.37%), Query Frame = 0
Query:    1 MLPAPLARERDHVECMTFMGLLPEIDHAWMTVDNVLFLWNY-HNQDFTQYRELEQVIVTVALVPPKRGVFQESVKHVLAVATTVEVVLLAVTFQGESKTTSCRNRRIQVRPTNFRAATDGVSMLKIAGHPNGRVFMAGKDGNMYELSYSVSYGFMYSVFFVGDATGARKCKRVRHRSSGASPSPMHAMYALLGMRSAQ--RTLADVVVDPLRNVLYTLDLEGNMDLFDLGVDG 230
            M P P A  R H E    MGLLPEI  A++T DN L+LW++ H +DFT Y  L+QVI++V LV P   V Q  ++++L VATTVEVVLL V+F+ E    S    R+ + P      TD VSML +AG   GR+FMAG DG +YEL+Y    G    +  +G + GA KC++  H ++           AL+G   A   + L  V VD  RN++YTL  +G ++L+DLG DG
Sbjct:   78 MHPLPAALARKHAEVHATMGLLPEISRAYVTFDNKLYLWHFDHAEDFTAYERLDQVILSVGLVMPT-PVVQGYIEYLLVVATTVEVVLLGVSFEREDDPHS----RMTLTPLRLTFPTDNVSMLAVAGTSAGRIFMAGGDGCLYELTYEDDRGGWRDM--LGWSRGA-KCRKFNHTTTHIG----RVARALVGSLLANPGQPLIAVEVDHYRNLMYTLAQDGTIELYDLGEDG 298          
BLAST of mRNA_H-paniculata_contig8314.16334.1 vs. uniprot
Match: A0A7S0BDF8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BDF8_9RHOD)

HSP 1 Score: 157 bits (398), Expect = 1.740e-40
Identity = 91/229 (39.74%), Postives = 131/229 (57.21%), Query Frame = 0
Query:    2 LPAPLARERDHVECMTFMGLLPEIDHAWMTVDNVLFLWNYHN-QDFTQYRELEQVIVTVALVPPKRGVFQESVKHVLAVATTVEVVLLAVTFQGESKTTSCRNRRIQVRPTNFRAATDGVSMLKIAGHPNGRVFMAGKDGNMYELSYSVSYGFMYSVFFVGDATGARKCKRVRHRSSGAS---PSPMHAMYALLGMRSAQRTLADVVVDPLRNVLYTLDLEGNMDLFDL 226
            LP  L  +  H+EC +FMG+ PEI  AW TVDN LFLWNY    DF  +  ++Q+I + A+V P+ GVF E VK++LAV+TTVEV+LL V F G S T+      I + PT     TD VSML + G    R+FMAG+DG ++EL+Y       +S+       G+RK +++ H  S  S   PS +   +      S    L D+ VD  R++L+ L   G++ ++D+
Sbjct:   47 LPKALFEQYSHLECKSFMGIFPEIHRAWFTVDNRLFLWNYATGSDFYPFEGIDQIITSAAIVEPRPGVFVEDVKYLLAVSTTVEVMLLGVCFSGPSVTSE-----ITLVPTQISVNTDNVSMLMLVGSRGRRLFMAGRDGCLHELTYQGESNSFWSL-------GSRKARKLNHSKSAFSSLIPSSVRLFF------SGDDPLIDLAVDDNRDLLFALSEHGSVSVYDI 257          
BLAST of mRNA_H-paniculata_contig8314.16334.1 vs. uniprot
Match: A0A1B6CAW0_9HEMI (Nucleoporin_N domain-containing protein (Fragment) n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6CAW0_9HEMI)

HSP 1 Score: 154 bits (389), Expect = 2.690e-39
Identity = 80/238 (33.61%), Postives = 134/238 (56.30%), Query Frame = 0
Query:    2 LPAPLARERDHVECMTFMGLLPEIDHAWMTVDNVLFLWNYHN-QDFTQYRELEQVIVTVALVPPKRGVFQESVKHVLAVATTVEVVLLAVTFQGESKTTSCRNRRIQVRPTNFRAATDGVSMLKIAGHPNGRVFMAGKDGNMYELSYSVSYGFMYSVFFVGDATGARKCKRVRHRSSGAS---PSPMHAMYALLGMRSAQRTLADVVVDPLRNVLYTLDLEGNMDLFDLGVDGNQTTQ 235
            LP  +     H++C   MG+  EI+ AW+T+D+ +++WNY N  D   Y  L + I++V LV PK GVFQ  ++H+L + TTVE+V+L V F   ++     N     +   +   TDGV +  I G  NGR+F+ GKDG+++E+ Y V  G+             ++CK+V H +   S   PS ++A +      S + ++  + +D  R++LYTL  +G +++FDLG +G +T++
Sbjct:   88 LPPEIMEHFGHMQCSCMMGIFSEINRAWLTIDSDIYIWNYENGSDVAYYDGLSETILSVGLVKPKPGVFQNCIRHLLVLTTTVEIVVLGVIFSSSNEANRTYNELNLTQEIIYTLTTDGVPINVITGTDNGRIFLGGKDGSLFEIMYQVEIGWW-----------GKRCKKVNHSTGTLSFLVPSFINAAF------SEEDSIIQISIDNSRHILYTLSEKGTIEVFDLGENGTKTSR 308          
BLAST of mRNA_H-paniculata_contig8314.16334.1 vs. uniprot
Match: A0A6A5C0M1_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C0M1_NAEFO)

HSP 1 Score: 151 bits (381), Expect = 3.500e-38
Identity = 89/248 (35.89%), Postives = 132/248 (53.23%), Query Frame = 0
Query:    2 LPAPLARERDHVECMTFMGLLPEIDHAWMTVDNVLFLWNY-HNQDFTQYRELEQVIVTVALVPPKRGVFQESVKHVLAVATTVEVVLLAVTFQGES------------------KTTSCRNRRIQVRPTNFRAATDGVSMLKIAGHPNGRVFMAGKDGNMYELSYSVSYGFMYSVFFVGDATGARKCKRVRHRSSGASPSPMHAMYALLGMRSAQRTLADVVVDPLRNVLYTLDLEGNMDLFDLGVDG 230
            LP P+  E   +E   +MG+ PEI  AW+T+DN  F+W+Y    DF +Y EL+QVI++  LV PK GVF++ VK++L +AT VEV L+A+TF   +                    T      +++  TN+   +D V+M+KI G  NGR+FM GKDG +YEL+Y    G+  S           KC+++ H     S S +  +       +    + D+VVD  RN LYTL     ++++DLG DG
Sbjct:   82 LPDPIFEEYRRLEYKCYMGIFPEIHRAWITIDNKFFIWSYLDGSDFNEYDELDQVIISAGLVKPKPGVFKDYVKYLLVLATPVEVALVALTFNNNNVASPSGAAHLDQQHLTFDSQTGAIYSEMELFATNYIIPSDNVNMIKIVGTQNGRIFMCGKDGCLYELTYEPEEGWFKS-----------KCRKLNH-----SQSFVGILVPAFLKFTHDDPIIDIVVDDTRNFLYTLSENMTIEVYDLGRDG 313          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8314.16334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0M6_ECTSI2.970e-11375.11Nucleoporin_N domain-containing protein n=1 Tax=Ec... [more]
A0A7R9YE90_9STRA4.190e-4840.74Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
L8HDY8_ACACA6.060e-4639.30Nucleoporin, putative n=1 Tax=Acanthamoeba castell... [more]
A0A7S3A661_9RHOD3.290e-4340.17Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A835YRU3_9STRA1.850e-4248.09Nup133 N terminal like-domain-containing protein n... [more]
A0A7S3ELT5_9RHOD3.890e-4240.17Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S1C2I9_9STRA4.620e-4142.92Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S0BDF8_9RHOD1.740e-4039.74Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A1B6CAW0_9HEMI2.690e-3933.61Nucleoporin_N domain-containing protein (Fragment)... [more]
A0A6A5C0M1_NAEFO3.500e-3835.89Uncharacterized protein n=2 Tax=Naegleria TaxID=57... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminalPFAMPF08801Nucleoporin_Ncoord: 2..232
e-value: 3.6E-45
score: 154.5
IPR004870Nucleoporin, Nup155-likePANTHERPTHR10350NUCLEAR PORE COMPLEX PROTEIN NUP155coord: 2..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8314contigH-paniculata_contig8314:4150..10420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8314.16334.1mRNA_H-paniculata_contig8314.16334.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8314 4150..10444 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8314.16334.1 ID=prot_H-paniculata_contig8314.16334.1|Name=mRNA_H-paniculata_contig8314.16334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
MLPAPLARERDHVECMTFMGLLPEIDHAWMTVDNVLFLWNYHNQDFTQYR
ELEQVIVTVALVPPKRGVFQESVKHVLAVATTVEVVLLAVTFQGESKTTS
CRNRRIQVRPTNFRAATDGVSMLKIAGHPNGRVFMAGKDGNMYELSYSVS
YGFMYSVFFVGDATGARKCKRVRHRSSGASPSPMHAMYALLGMRSAQRTL
ADVVVDPLRNVLYTLDLEGNMDLFDLGVDGNQTTQK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014908Nucleoporin_Nup133/Nup155_N
IPR004870Nucleoporin_Nup155