prot_H-paniculata_contig8293.16315.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8293.16315.1
Unique Nameprot_H-paniculata_contig8293.16315.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length272
Homology
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BLAST of mRNA_H-paniculata_contig8293.16315.1 vs. uniprot
Match: D8LKQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ1_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 3.140e-47
Identity = 131/328 (39.94%), Postives = 160/328 (48.78%), Query Frame = 0 
Query:    2 RSDRNSVQRDELGGWDASALSRIGLKYVRSRDDLAWYLGSLHTLPREQWPTMIAVDDLDRIVDTSAGGHVGN--------------ASSGGSTSGGAGARPGQDTAEFFDRSRTATIGATSAAAAGT--GASPACPKSATARSDPAYTPSDAENPVGTSSHTVIPERNMG--LFLEGGRDD----TRGGGA---------GPGRENCQPEA--VRVVATCSILDRGLISLYGRFMHVVTRVQNTAGPDCFSVRVDPGICTAPAQQLQITAVETQSRVFGGSRGG--------------------------DAMAVEFARSQIDGSFAV 270
            RS R   + DEL GW+A AL RIG+KYVRSRDDLAWYL SLHTL + QWPT+IAVDD+D+I++TSAG                   A               QDTAEFFD+SR       +  A G+  G++P                  AE   G   +T  P+      L + GG  +    T G G+         G GR++   EA  VRVV TCS  DRG++SLYGRF+HVV RVQNT GPDCFS+RVDPGI TA A    +      +   GG   G                              VE+ RSQIDGSFA+
Sbjct:  165 RSMRAGGESDELRGWEAIALGRIGIKYVRSRDDLAWYLASLHTLKKSQWPTVIAVDDVDKIIETSAGXXXXXXXXXXXXXXXLRILALL-------------QDTAEFFDKSRAEAAATAAXXARGSTAGSTPNRXXXXXXXXXXXXXXQPAERGSGGGGNTSSPQSQPSGNLRVVGGEGERFAWTPGEGSRAADGARPKGGGRDDITGEAAAVRVVTTCSTSDRGMLSLYGRFVHVVARVQNTTGPDCFSLRVDPGIGTASAPAPYLRPRPAAASGSGGFAPGFTPWDGXXXXXXXXXXXXXXXXXXXXHQEVVEYVRSQIDGSFAL 479
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BLAST of mRNA_H-paniculata_contig8293.16315.1 vs. uniprot
Match: A0A835ZEM9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEM9_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 8.130e-10
Identity = 31/57 (54.39%), Postives = 40/57 (70.18%), Query Frame = 0 
Query:   11 DELGGWDASALSRIGLKYVRSRDDLAWYLGSLHTLPREQWPTMIAVDDLDRIVDTSA 67
            D   GWD +AL RIG+KYV SR+DL W+LGS+  L RE +P  + VDD+D I+  SA
Sbjct:   97 DAPQGWDPAALERIGMKYVASREDLLWFLGSVQMLRREAFPCALLVDDIDVILGASA 153
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8293.16315.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKQ1_ECTSI3.140e-4739.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZEM9_9STRA8.130e-1054.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8293contigH-paniculata_contig8293:4867..9503 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8293.16315.1mRNA_H-paniculata_contig8293.16315.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8293 3961..9567 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8293.16315.1 ID=prot_H-paniculata_contig8293.16315.1|Name=mRNA_H-paniculata_contig8293.16315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=272bp
MRSDRNSVQRDELGGWDASALSRIGLKYVRSRDDLAWYLGSLHTLPREQW
PTMIAVDDLDRIVDTSAGGHVGNASSGGSTSGGAGARPGQDTAEFFDRSR
TATIGATSAAAAGTGASPACPKSATARSDPAYTPSDAENPVGTSSHTVIP
ERNMGLFLEGGRDDTRGGGAGPGRENCQPEAVRVVATCSILDRGLISLYG
RFMHVVTRVQNTAGPDCFSVRVDPGICTAPAQQLQITAVETQSRVFGGSR
GGDAMAVEFARSQIDGSFAVV*
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