prot_H-paniculata_contig82854.16306.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig82854.16306.1
Unique Nameprot_H-paniculata_contig82854.16306.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length110
Homology
BLAST of mRNA_H-paniculata_contig82854.16306.1 vs. uniprot
Match: D1J7D7_ECTSI (Multifunctional fusion protein n=10 Tax=Phaeophyceae TaxID=2870 RepID=D1J7D7_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 5.800e-79
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
Query:    1 MRVTQGCFSFLPDLSDDQIKQQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGFY 110
            MRVTQGCFSFLPDLSDDQIKQQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGFY
Sbjct:    1 MRVTQGCFSFLPDLSDDQIKQQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGFY 110          
BLAST of mRNA_H-paniculata_contig82854.16306.1 vs. uniprot
Match: RBS_ECTSI (Ribulose bisphosphate carboxylase small subunit n=136 Tax=Phaeophyceae TaxID=2870 RepID=RBS_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 1.660e-78
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0
Query:    1 MRVTQGCFSFLPDLSDDQIKQQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGFY 110
            MRVTQGCFSFLPDLSDDQIKQQV+YAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGFY
Sbjct:    1 MRVTQGCFSFLPDLSDDQIKQQVSYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGFY 110          
BLAST of mRNA_H-paniculata_contig82854.16306.1 vs. uniprot
Match: Q52Z36_9PHAE (Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (Fragment) n=1 Tax=Lessonia flavicans TaxID=169771 RepID=Q52Z36_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 7.840e-73
Identity = 99/109 (90.83%), Postives = 106/109 (97.25%), Query Frame = 0
Query:    1 MRVTQGCFSFLPDLSDDQIKQQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGF 109
            MRVTQGCFSFLPDLSD+QIK+QVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFD++DPAA+MYEL ECRKVNPEGYIKINAFDASIGTESCV+SF+VQRP  EPGF
Sbjct:    1 MRVTQGCFSFLPDLSDEQIKKQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDIQDPAALMYELGECRKVNPEGYIKINAFDASIGTESCVLSFLVQRPSNEPGF 109          
BLAST of mRNA_H-paniculata_contig82854.16306.1 vs. uniprot
Match: A0A0S0GBG1_COSCS (Multifunctional fusion protein n=33 Tax=Phaeophyceae TaxID=2870 RepID=A0A0S0GBG1_COSCS)

HSP 1 Score: 220 bits (561), Expect = 2.100e-72
Identity = 98/110 (89.09%), Postives = 107/110 (97.27%), Query Frame = 0
Query:    1 MRVTQGCFSFLPDLSDDQIKQQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGFY 110
            MRVTQGCFSFLPDL+D+QIK+QVAYAM+KGWAVSVEWTDDPHPRN+YWELWGLPLFD++DPAA+MYEL ECRKVNPEGYIKINAFDASIGTESCV+SFIVQRP  EPGFY
Sbjct:    1 MRVTQGCFSFLPDLTDEQIKKQVAYAMTKGWAVSVEWTDDPHPRNAYWELWGLPLFDIQDPAALMYELGECRKVNPEGYIKINAFDASIGTESCVLSFIVQRPSNEPGFY 110          
BLAST of mRNA_H-paniculata_contig82854.16306.1 vs. uniprot
Match: Q52Z56_9PHAE (Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (Fragment) n=2 Tax=Chorda filum TaxID=64905 RepID=Q52Z56_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 2.920e-72
Identity = 98/110 (89.09%), Postives = 105/110 (95.45%), Query Frame = 0
Query:    1 MRVTQGCFSFLPDLSDDQIKQQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGFY 110
            MRVTQGCFSFLPDLSD+QI +QV YAM+KGWAVSVEWTDDPHPRNSYWELWGLPLFD+KDPAAVMYEL ECR+VNP+GYIKINAFDASIGTESC MSFIVQRP+ EPGFY
Sbjct:    1 MRVTQGCFSFLPDLSDEQITKQVNYAMTKGWAVSVEWTDDPHPRNSYWELWGLPLFDIKDPAAVMYELNECRRVNPDGYIKINAFDASIGTESCAMSFIVQRPVNEPGFY 110          
BLAST of mRNA_H-paniculata_contig82854.16306.1 vs. uniprot
Match: A0A0R6LUN5_UNDPI (Multifunctional fusion protein n=44 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUN5_UNDPI)

HSP 1 Score: 219 bits (558), Expect = 6.010e-72
Identity = 98/110 (89.09%), Postives = 106/110 (96.36%), Query Frame = 0
Query:    1 MRVTQGCFSFLPDLSDDQIKQQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGFY 110
            MRVTQGCFSFLPDL+D+QIK+QVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFD++D AA+MYELAECRKVNPEGYIKINAFDASIGTESC +SF+VQRP  EPGFY
Sbjct:    1 MRVTQGCFSFLPDLTDEQIKKQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDIQDAAALMYELAECRKVNPEGYIKINAFDASIGTESCALSFLVQRPANEPGFY 110          
BLAST of mRNA_H-paniculata_contig82854.16306.1 vs. uniprot
Match: Q9GGQ1_VAULI (Multifunctional fusion protein n=2 Tax=PX clade TaxID=569578 RepID=Q9GGQ1_VAULI)

HSP 1 Score: 210 bits (534), Expect = 2.740e-68
Identity = 90/110 (81.82%), Postives = 105/110 (95.45%), Query Frame = 0
Query:    1 MRVTQGCFSFLPDLSDDQIKQQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGFY 110
            MRVTQGCFSFLPDLSD+QIK+Q+ YA++KGWA+S+EW+DDPHPRN+YWELWGLPLFD+KD +AV+YE+ ECR+VNPEGY+KINAFDASIGTESCVMSFIVQRP  EPGFY
Sbjct:    1 MRVTQGCFSFLPDLSDEQIKKQIEYAVNKGWAISIEWSDDPHPRNTYWELWGLPLFDIKDSSAVLYEITECRRVNPEGYMKINAFDASIGTESCVMSFIVQRPNEEPGFY 110          
BLAST of mRNA_H-paniculata_contig82854.16306.1 vs. uniprot
Match: A0A1L2F1V1_9PHAE (Multifunctional fusion protein n=208 Tax=Fucales TaxID=3009 RepID=A0A1L2F1V1_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.120e-67
Identity = 92/110 (83.64%), Postives = 101/110 (91.82%), Query Frame = 0
Query:    1 MRVTQGCFSFLPDLSDDQIKQQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGFY 110
            MR+TQGCFSFLPDLSD+QIK QV YA+SKGWAVSVEWTDDPHPRN+YWELWGLPLFD+KD AAVMYEL ECR++NPEGYIKIN +DAS GTESC +SFIVQRP  EPGFY
Sbjct:    1 MRITQGCFSFLPDLSDEQIKNQVNYAISKGWAVSVEWTDDPHPRNAYWELWGLPLFDIKDSAAVMYELNECRRINPEGYIKINCYDASKGTESCALSFIVQRPAEEPGFY 110          
BLAST of mRNA_H-paniculata_contig82854.16306.1 vs. uniprot
Match: A0A2I4Q2E0_9PHAE (Multifunctional fusion protein n=11 Tax=Dictyopteris TaxID=112054 RepID=A0A2I4Q2E0_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 4.550e-67
Identity = 90/110 (81.82%), Postives = 104/110 (94.55%), Query Frame = 0
Query:    1 MRVTQGCFSFLPDLSDDQIKQQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGFY 110
            MR+TQGCFSFLPDL+D+QIK+QV YA++K WAVSVEWTDDPHPRNSYWELWGLPLFD+KDPAA++YEL +CR+VNPEGYIK+NAFDA+ GTESCV+SFIVQRP  EPGFY
Sbjct:    1 MRLTQGCFSFLPDLTDEQIKKQVEYAITKEWAVSVEWTDDPHPRNSYWELWGLPLFDIKDPAALLYELNQCRRVNPEGYIKVNAFDANRGTESCVLSFIVQRPTEEPGFY 110          
BLAST of mRNA_H-paniculata_contig82854.16306.1 vs. uniprot
Match: E8Z964_9PHAE (Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (Fragment) n=2 Tax=Dictyopteris repens TaxID=218863 RepID=E8Z964_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 7.790e-67
Identity = 90/110 (81.82%), Postives = 101/110 (91.82%), Query Frame = 0
Query:    1 MRVTQGCFSFLPDLSDDQIKQQVAYAMSKGWAVSVEWTDDPHPRNSYWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRPITEPGFY 110
            MR+TQGCFSFLPDL+D+QI  QV YA+SKGWA+S+EWTDDPHPRNSYWELWGLPLFD+KD AAV+YEL +CR+VNPEGYIKINAFDAS GTESC +SFIVQRP  EPGFY
Sbjct:    1 MRITQGCFSFLPDLTDEQITSQVNYAISKGWAISIEWTDDPHPRNSYWELWGLPLFDIKDSAAVLYELNQCRRVNPEGYIKINAFDASKGTESCALSFIVQRPTEEPGFY 110          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig82854.16306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J7D7_ECTSI5.800e-79100.00Multifunctional fusion protein n=10 Tax=Phaeophyce... [more]
RBS_ECTSI1.660e-7899.09Ribulose bisphosphate carboxylase small subunit n=... [more]
Q52Z36_9PHAE7.840e-7390.83Ribulose-1,5-bisphosphate carboxylase/oxygenase sm... [more]
A0A0S0GBG1_COSCS2.100e-7289.09Multifunctional fusion protein n=33 Tax=Phaeophyce... [more]
Q52Z56_9PHAE2.920e-7289.09Ribulose-1,5-bisphosphate carboxylase/oxygenase sm... [more]
A0A0R6LUN5_UNDPI6.010e-7289.09Multifunctional fusion protein n=44 Tax=Laminarial... [more]
Q9GGQ1_VAULI2.740e-6881.82Multifunctional fusion protein n=2 Tax=PX clade Ta... [more]
A0A1L2F1V1_9PHAE1.120e-6783.64Multifunctional fusion protein n=208 Tax=Fucales T... [more]
A0A2I4Q2E0_9PHAE4.550e-6781.82Multifunctional fusion protein n=11 Tax=Dictyopter... [more]
E8Z964_9PHAE7.790e-6781.82Ribulose-1,5-bisphosphate carboxylase/oxygenase sm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000894Ribulose bisphosphate carboxylase small chain, domainSMARTSM00961RuBisCO_small_2_acoord: 4..103
e-value: 2.0E-40
score: 150.3
IPR000894Ribulose bisphosphate carboxylase small chain, domainPFAMPF00101RuBisCO_smallcoord: 5..103
e-value: 1.1E-37
score: 127.9
IPR036385Ribulose bisphosphate carboxylase, small subunit superfamilyGENE3D3.30.190.10coord: 1..110
e-value: 2.3E-44
score: 152.6
IPR036385Ribulose bisphosphate carboxylase, small subunit superfamilySUPERFAMILY55239RuBisCO, small subunitcoord: 1..109
NoneNo IPR availablePANTHERPTHR31262FAMILY NOT NAMEDcoord: 7..104
NoneNo IPR availablePANTHERPTHR31262:SF0coord: 7..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig82854contigH-paniculata_contig82854:2..331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig82854.16306.1mRNA_H-paniculata_contig82854.16306.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig82854 2..331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig82854.16306.1 ID=prot_H-paniculata_contig82854.16306.1|Name=mRNA_H-paniculata_contig82854.16306.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
MRVTQGCFSFLPDLSDDQIKQQVAYAMSKGWAVSVEWTDDPHPRNSYWEL
WGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIV
QRPITEPGFY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000894RuBisCO_sc_dom
IPR036385RuBisCO_ssu_sf