prot_H-paniculata_contig8274.16294.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8274.16294.1 vs. uniprot
Match: UPI001131AAB8 (Ty1/Copia family RNAse HI domain-containing protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001131AAB8) HSP 1 Score: 105 bits (261), Expect = 2.510e-23 Identity = 68/194 (35.05%), Postives = 105/194 (54.12%), Query Frame = 0
Query: 9 IVVYVDDLVISTKGSTEMDELPVDLAEDNKLMDLVEAKYHLGCHITRDRERRELTFHHHLYAFSMAERFGVT-KTSMLPATAGSKALTKNDESTMPE-ERAEIRAFPCREAVEAFMWAATMARPDITHADRTAAKFCQNSGVPHKKAVLKILQYVLKTTDISITYSQQDCEVEIVAYADSDFALCDDSRRSGSG 200
+++YVDD++I++K S E+D+L + L ++ ++ DL EAK LG I RDR ++L Y + +RFG+ KT + S S M E ER + P V + M+A RPDI+ A +++ N G H +AV IL+Y+ T D+ + + Q+D + +V Y DSDFA D RRS +G
Sbjct: 25 LLLYVDDMLIASKNSEEIDKLKIQLKKEFEMKDLGEAKKILGMEIIRDRRSKKLCLSQKEYLKRVLQRFGIDDKTKPVSTPLASHFKLSTTMSPMDEAEREYMSKVPYANVVGSLMYAMVCTRPDISQAVGVISRYMHNPGKEHWQAVKWILRYIHNTVDVGLVFEQEDNQ-SVVGYCDSDFAGDLDKRRSTTG 217
BLAST of mRNA_H-paniculata_contig8274.16294.1 vs. uniprot
Match: V5ZTC4_9BRAS (Hypothetical transposable element-related protein (Fragment) n=1 Tax=Boechera divaricarpa TaxID=115915 RepID=V5ZTC4_9BRAS) HSP 1 Score: 106 bits (265), Expect = 6.290e-23 Identity = 68/202 (33.66%), Postives = 107/202 (52.97%), Query Frame = 0
Query: 9 IVVYVDDLVISTKGSTEMDELPVDLAEDNKLMDLVEAKYHLGCHITRDRERRELTFHHHLYAFSMAERFGV--TKTSMLPATAGSKALTKNDESTMPEERAEIRAF---PCREAVEAFMWAATMARPDITHADRTAAKFCQNSGVPHKKAVLKILQYVLKTTDISITYSQQDCEVEIVAYADSDFALCDDSRRSGSGGLVLM 205
+V+YVDD++++T + E+ L ++ ++ DL EA + LG I RDR + L Y + +RFG+ K P G K S P+E EI+ P AV + M+A RPDI + ++ N G+ H KA ++++Y+ +T D +TY + D +EI+ Y+DSDFA C DSR+S SG + L+
Sbjct: 1021 LVLYVDDILLATNDINMLHEIKNFLKDNFEMKDLGEASFVLGIQIIRDRNQGILRLSQKNYIDKVLKRFGMHDCKPGDTPVAKGDKFCL----SQCPKENLEIQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGVLGRYLSNPGLDHWKAAKRVMRYLQRTKDYMLTYQRSD-NLEIIGYSDSDFAGCQDSRKSTSGYVFLL 1217
BLAST of mRNA_H-paniculata_contig8274.16294.1 vs. uniprot
Match: A0A438DEJ3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DEJ3_VITVI) HSP 1 Score: 102 bits (253), Expect = 5.180e-22 Identity = 62/200 (31.00%), Postives = 112/200 (56.00%), Query Frame = 0
Query: 9 IVVYVDDLVISTKGSTEMDELPVDLAEDNKLMDLVEAKYHLGCHITRDRERRELTFHHHLYAFSMAERFGV--TKTSMLPATAGSK-ALTKNDESTMPEERAEIRAFPCREAVEAFMWAATMARPDITHADRTAAKFCQNSGVPHKKAVLKILQYVLKTTDISITYSQQDCEVEIVAYADSDFALCDDSRRSGSGGLVLM 205
+V+YVDD++++T + + + L++ ++ DL +A + LG I RDR R L Y + +RFG+ +K P G K +L + ++++ E E++ P V + M+A RPDI + ++ N G+ H +A ++++Y+ +T + +TY + D ++E++ Y+DSDFA C DSRRS SG + L+
Sbjct: 97 LVLYVDDILLATNDISILHDTKSFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRFGMQNSKPGDTPVAKGDKFSLNQCPKNSL--ESQEMQKIPYASVVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLELIGYSDSDFAGCQDSRRSTSGYIYLL 293
BLAST of mRNA_H-paniculata_contig8274.16294.1 vs. uniprot
Match: A5B7I7_VITVI (Integrase catalytic domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5B7I7_VITVI) HSP 1 Score: 103 bits (257), Expect = 6.830e-22 Identity = 62/205 (30.24%), Postives = 115/205 (56.10%), Query Frame = 0
Query: 9 IVVYVDDLVISTKGSTEMDELPVDLAEDNKLMDLVEAKYHLGCHITRDRERRELTFHHHLYAFSMAERFGVTKTSM--LPATAGSK-ALTKNDESTMPEERAEIRAFPCREAVEAFMWAATMARPDITHADRTAAKFCQNSGVPHKKAVLKILQYVLKTTDISITYSQQDCEVEIVAYADSDFALCDDSRRSGSGGLVLMEALSA 210
+V+YVDD++++T + + + L++ ++ DL +A + LG I RDR R L Y + +R+G+ + + P G K +L + ++++ E E++ P AV + M+A RPDI + ++ N G+ H +A ++++Y+ +T + +TY + D ++E++ Y+DSDFA C DSRRS SG + L++ A
Sbjct: 561 LVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKLGDTPVAKGDKFSLNQCPKNSL--ESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLELIGYSDSDFAGCQDSRRSTSGYIYLLDEFVA 762
BLAST of mRNA_H-paniculata_contig8274.16294.1 vs. uniprot
Match: A0A438G156_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438G156_VITVI) HSP 1 Score: 102 bits (254), Expect = 1.760e-21 Identity = 62/200 (31.00%), Postives = 113/200 (56.50%), Query Frame = 0
Query: 9 IVVYVDDLVISTKGSTEMDELPVDLAEDNKLMDLVEAKYHLGCHITRDRERRELTFHHHLYAFSMAERFGV--TKTSMLPATAGSK-ALTKNDESTMPEERAEIRAFPCREAVEAFMWAATMARPDITHADRTAAKFCQNSGVPHKKAVLKILQYVLKTTDISITYSQQDCEVEIVAYADSDFALCDDSRRSGSGGLVLM 205
+V+YVDD++++T + + + L++ ++ DL +A + LG I RDR R L Y + +R+G+ +K P G K +L + ++++ E E++ P AV + M+A RPDI + ++ N G+ H +A ++++Y+ +T + +TY + D ++E++ Y+DSDFA C DSRRS SG + L+
Sbjct: 725 LVLYVDDILLATNDISILHDTKRFLSKHFEMKDLSDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPKNSL--ESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLELIGYSDSDFAGCQDSRRSTSGYIYLL 921
BLAST of mRNA_H-paniculata_contig8274.16294.1 vs. uniprot
Match: A0A438CGK4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CGK4_VITVI) HSP 1 Score: 102 bits (253), Expect = 2.390e-21 Identity = 62/200 (31.00%), Postives = 113/200 (56.50%), Query Frame = 0
Query: 9 IVVYVDDLVISTKGSTEMDELPVDLAEDNKLMDLVEAKYHLGCHITRDRERRELTFHHHLYAFSMAERFGV--TKTSMLPATAGSK-ALTKNDESTMPEERAEIRAFPCREAVEAFMWAATMARPDITHADRTAAKFCQNSGVPHKKAVLKILQYVLKTTDISITYSQQDCEVEIVAYADSDFALCDDSRRSGSGGLVLM 205
+V+YVDD++++T + + + L++ ++ DL +A + LG I RDR R L Y + +R+G+ +K P G K +L + ++++ E E++ P AV + M+A RPDI + ++ N G+ H +A ++++Y+ +T + +TY + D ++E++ Y+DSDFA C DSRRS SG + L+
Sbjct: 670 LVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPKNSL--ESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLELIGYSDSDFAGCQDSRRSTSGYIYLL 866
BLAST of mRNA_H-paniculata_contig8274.16294.1 vs. uniprot
Match: A0A438E561_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E561_VITVI) HSP 1 Score: 102 bits (253), Expect = 2.430e-21 Identity = 62/200 (31.00%), Postives = 113/200 (56.50%), Query Frame = 0
Query: 9 IVVYVDDLVISTKGSTEMDELPVDLAEDNKLMDLVEAKYHLGCHITRDRERRELTFHHHLYAFSMAERFGV--TKTSMLPATAGSK-ALTKNDESTMPEERAEIRAFPCREAVEAFMWAATMARPDITHADRTAAKFCQNSGVPHKKAVLKILQYVLKTTDISITYSQQDCEVEIVAYADSDFALCDDSRRSGSGGLVLM 205
+V+YVDD++++T + + + L++ ++ DL +A + LG I RDR R L Y + +R+G+ +K P G K +L + ++++ E E++ P AV + M+A RPDI + ++ N G+ H +A ++++Y+ +T + +TY + D ++E++ Y+DSDFA C DSRRS SG + L+
Sbjct: 856 LVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPKNSL--ESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLELIGYSDSDFAGCQDSRRSTSGYIYLL 1052
BLAST of mRNA_H-paniculata_contig8274.16294.1 vs. uniprot
Match: A0A438CGN0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CGN0_VITVI) HSP 1 Score: 102 bits (253), Expect = 2.460e-21 Identity = 62/200 (31.00%), Postives = 113/200 (56.50%), Query Frame = 0
Query: 9 IVVYVDDLVISTKGSTEMDELPVDLAEDNKLMDLVEAKYHLGCHITRDRERRELTFHHHLYAFSMAERFGV--TKTSMLPATAGSK-ALTKNDESTMPEERAEIRAFPCREAVEAFMWAATMARPDITHADRTAAKFCQNSGVPHKKAVLKILQYVLKTTDISITYSQQDCEVEIVAYADSDFALCDDSRRSGSGGLVLM 205
+V+YVDD++++T + + + L++ ++ DL +A + LG I RDR R L Y + +R+G+ +K P G K +L + ++++ E E++ P AV + M+A RPDI + ++ N G+ H +A ++++Y+ +T + +TY + D ++E++ Y+DSDFA C DSRRS SG + L+
Sbjct: 749 LVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPKNSL--ESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLELIGYSDSDFAGCQDSRRSTSGYIYLL 945
BLAST of mRNA_H-paniculata_contig8274.16294.1 vs. uniprot
Match: A0A438CE37_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CE37_VITVI) HSP 1 Score: 102 bits (253), Expect = 2.470e-21 Identity = 62/200 (31.00%), Postives = 113/200 (56.50%), Query Frame = 0
Query: 9 IVVYVDDLVISTKGSTEMDELPVDLAEDNKLMDLVEAKYHLGCHITRDRERRELTFHHHLYAFSMAERFGV--TKTSMLPATAGSK-ALTKNDESTMPEERAEIRAFPCREAVEAFMWAATMARPDITHADRTAAKFCQNSGVPHKKAVLKILQYVLKTTDISITYSQQDCEVEIVAYADSDFALCDDSRRSGSGGLVLM 205
+V+YVDD++++T + + + L++ ++ DL +A + LG I RDR R L Y + +R+G+ +K P G K +L + ++++ E E++ P AV + M+A RPDI + ++ N G+ H +A ++++Y+ +T + +TY + D ++E++ Y+DSDFA C DSRRS SG + L+
Sbjct: 897 LVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPKNSL--ESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLELIGYSDSDFAGCQDSRRSTSGYIYLL 1093
BLAST of mRNA_H-paniculata_contig8274.16294.1 vs. uniprot
Match: A0A438JDV8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JDV8_VITVI) HSP 1 Score: 102 bits (253), Expect = 2.470e-21 Identity = 62/200 (31.00%), Postives = 113/200 (56.50%), Query Frame = 0
Query: 9 IVVYVDDLVISTKGSTEMDELPVDLAEDNKLMDLVEAKYHLGCHITRDRERRELTFHHHLYAFSMAERFGV--TKTSMLPATAGSK-ALTKNDESTMPEERAEIRAFPCREAVEAFMWAATMARPDITHADRTAAKFCQNSGVPHKKAVLKILQYVLKTTDISITYSQQDCEVEIVAYADSDFALCDDSRRSGSGGLVLM 205
+V+YVDD++++T + + + L++ ++ DL +A + LG I RDR R L Y + +R+G+ +K P G K +L + ++++ E E++ P AV + M+A RPDI + ++ N G+ H +A ++++Y+ +T + +TY + D ++E++ Y+DSDFA C DSRRS SG + L+
Sbjct: 882 LVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPKNSL--ESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKEYMLTYRRLD-QLELIGYSDSDFAGCQDSRRSTSGYIYLL 1078 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8274.16294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig8274.16294.1 ID=prot_H-paniculata_contig8274.16294.1|Name=mRNA_H-paniculata_contig8274.16294.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=218bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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