prot_H-paniculata_contig8266.16286.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig8266.16286.1
Unique Name	prot_H-paniculata_contig8266.16286.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	149

Homology

[Close]

BLAST of mRNA_H-paniculata_contig8266.16286.1 vs. uniprot
Match: A0A6H5KQ40_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ40_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 7.090e-35
Identity = 67/145 (46.21%), Postives = 91/145 (62.76%), Query Frame = 0

Query:    6 RELCDETATKHEFACTNTPQEVGISERDGRTLAPIVRYMFQGSGLPTFLWWGLMFTVAYVANRSPHSPLEMVIPYKKLFGEEANLKHLCIIKAKAIVHIERHTKKLEPRPGRDFSAAI-MTTASYRVLNPTSKRVLGSRNVTFIE 149
            R+ C  +A K E+A TNTPQ++G SERDG+TLA + R + +    P  +WW LM T AY+ NRSPHS L    PY KL  +  +L  L +I A+A VH ER+ KKL+ R          + + +YRVLNP++  V+ SRN+TFIE
Sbjct:   28 RDYCKNSAIKLEYAATNTPQQIGESERDGQTLAGVTRCLLKDGDFPPSMWWQLMLTAAYLFNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNLTFIE 172

[Close]

BLAST of mRNA_H-paniculata_contig8266.16286.1 vs. uniprot
Match: A0A6H5JWF9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWF9_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 2.070e-34
Identity = 68/145 (46.90%), Postives = 93/145 (64.14%), Query Frame = 0

Query:    6 RELCDETATKHEFACTNTPQEVGISERDGRTLAPIVRYMFQGSGLPTFLWWGLMFTVAYVANRSPHSPLEMVIPYKKLFGEEANLKHLCIIKAKAIVHIERHTKKLEPRPGRDFSAAI-MTTASYRVLNPTSKRVLGSRNVTFIE 149
            RE C +   K E+A TNTPQ++G +ER GRTLA +VR +   SGLP FLW GLM T  Y++NR PH+ L  + PYK L+ ++ANL HL  I A+A VH+E HT++L+P+          M + S+ + NP +  V  SRNV F+E
Sbjct:  346 REYCLQIGVKLEYASTNTPQQIGANERAGRTLAAMVRCLLTDSGLPKFLWGGLMQTAVYLSNRVPHAALGNITPYKALYCKDANLGHLRAIGARAFVHVETHTRELDPKAWEGCLCGYSMDSKSFHIYNPETGNVRESRNVIFVE 490

[Close]

BLAST of mRNA_H-paniculata_contig8266.16286.1 vs. uniprot
Match: A0A6H5KF63_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF63_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 4.710e-32
Identity = 65/145 (44.83%), Postives = 91/145 (62.76%), Query Frame = 0

Query:    6 RELCDETATKHEFACTNTPQEVGISERDGRTLAPIVRYMFQGSGLPTFLWWGLMFTVAYVANRSPHSPLEMVIPYKKLFGEEANLKHLCIIKAKAIVHIERHTKKLEPRPGRDFSAAI-MTTASYRVLNPTSKRVLGSRNVTFIE 149
            R+ C  +A K E+A TNTPQ++G+SERDG+TLA + R + +    P  +W  +M T AY+ NRSPHS L    PY KL  +  +L  L +I A+A VH ER+ KKL+ R          + + +YRVL+P++  V+ SRNVTFIE
Sbjct:  139 RDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGEIMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLDPSNGAVVESRNVTFIE 283

[Close]

BLAST of mRNA_H-paniculata_contig8266.16286.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 5.370e-32
Identity = 67/145 (46.21%), Postives = 91/145 (62.76%), Query Frame = 0

Query:    6 RELCDETATKHEFACTNTPQEVGISERDGRTLAPIVRYMFQGSGLPTFLWWGLMFTVAYVANRSPHSPLEMVIPYKKLFGEEANLKHLCIIKAKAIVHIERHTKKLEPRPGRDFSAAI-MTTASYRVLNPTSKRVLGSRNVTFIE 149
            R+ C  +A K E+A TNTPQ++G+SERDG+TLA + R + +    P  +W  LM T AY+ NRSPHS L    PY KL  +  +L  L +I A+A VH ER+ KKL+ R          + + +YRVLNP++  V+ SRNVTFIE
Sbjct:  185 RDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSRLRVIGARAFVHQERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIE 329

[Close]

BLAST of mRNA_H-paniculata_contig8266.16286.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 9.420e-32
Identity = 67/145 (46.21%), Postives = 91/145 (62.76%), Query Frame = 0

Query:    6 RELCDETATKHEFACTNTPQEVGISERDGRTLAPIVRYMFQGSGLPTFLWWGLMFTVAYVANRSPHSPLEMVIPYKKLFGEEANLKHLCIIKAKAIVHIERHTKKLEPRPGRDFSAAI-MTTASYRVLNPTSKRVLGSRNVTFIE 149
            R+ C  +A K E+A TNTPQ++G+SERDG+TLA + R + +    P  +W  LM T AY+ NRSPHS L    PY KL  +  +L  L +I A+A VH ER+ KKL+ R          + + +YRVLNP++  V+ SRNVTFIE
Sbjct:  185 RDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIE 329

[Close]

BLAST of mRNA_H-paniculata_contig8266.16286.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.000e-31
Identity = 67/145 (46.21%), Postives = 91/145 (62.76%), Query Frame = 0

Query:    6 RELCDETATKHEFACTNTPQEVGISERDGRTLAPIVRYMFQGSGLPTFLWWGLMFTVAYVANRSPHSPLEMVIPYKKLFGEEANLKHLCIIKAKAIVHIERHTKKLEPRPGRDFSAAI-MTTASYRVLNPTSKRVLGSRNVTFIE 149
            R+ C  +A K E+A TNTPQ++G+SERDG+TLA + R + +    P  +W  LM T AY+ NRSPHS L    PY KL  +  +L  L +I A+A VH ER+ KKL+ R          + + +YRVLNP++  V+ SRNVTFIE
Sbjct:  185 RDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIE 329

[Close]

BLAST of mRNA_H-paniculata_contig8266.16286.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.010e-31
Identity = 67/145 (46.21%), Postives = 91/145 (62.76%), Query Frame = 0

Query:    6 RELCDETATKHEFACTNTPQEVGISERDGRTLAPIVRYMFQGSGLPTFLWWGLMFTVAYVANRSPHSPLEMVIPYKKLFGEEANLKHLCIIKAKAIVHIERHTKKLEPRPGRDFSAAI-MTTASYRVLNPTSKRVLGSRNVTFIE 149
            R+ C  +A K E+A TNTPQ++G+SERDG+TLA + R + +    P  +W  LM T AY+ NRSPHS L    PY KL  +  +L  L +I A+A VH ER+ KKL+ R          + + +YRVLNP++  V+ SRNVTFIE
Sbjct:  185 RDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIE 329

[Close]

BLAST of mRNA_H-paniculata_contig8266.16286.1 vs. uniprot
Match: A0A6H5KLG0_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG0_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 1.320e-31
Identity = 67/145 (46.21%), Postives = 91/145 (62.76%), Query Frame = 0

Query:    6 RELCDETATKHEFACTNTPQEVGISERDGRTLAPIVRYMFQGSGLPTFLWWGLMFTVAYVANRSPHSPLEMVIPYKKLFGEEANLKHLCIIKAKAIVHIERHTKKLEPRPGRDFSAAI-MTTASYRVLNPTSKRVLGSRNVTFIE 149
            R+ C  +ATK E+A TNT Q++G+SERDG+TLA + R + +    P  +W  LM T AY+ NRSPHS L    PY KL  +  +L  L +I A+A VH ER+ KKL+ R          + + +YRVLNP++  V+ SRNVTFIE
Sbjct:   76 RDYCKNSATKLEYAATNTTQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIE 220

[Close]

BLAST of mRNA_H-paniculata_contig8266.16286.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 1.840e-31
Identity = 67/145 (46.21%), Postives = 91/145 (62.76%), Query Frame = 0

Query:    6 RELCDETATKHEFACTNTPQEVGISERDGRTLAPIVRYMFQGSGLPTFLWWGLMFTVAYVANRSPHSPLEMVIPYKKLFGEEANLKHLCIIKAKAIVHIERHTKKLEPRPGRDFSAAI-MTTASYRVLNPTSKRVLGSRNVTFIE 149
            R+ C  +A K E+A TNTPQ++G+SERDG+TLA + R + +    P  +W  LM T AY+ NRSPHS L    PY KL  +  +L  L +I A+A VH ER+ KKL+ R          + + +YRVLNP++  V+ SRNVTFIE
Sbjct:  381 RDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLLGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIE 525

[Close]

BLAST of mRNA_H-paniculata_contig8266.16286.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 8.510e-31
Identity = 67/145 (46.21%), Postives = 90/145 (62.07%), Query Frame = 0

Query:    6 RELCDETATKHEFACTNTPQEVGISERDGRTLAPIVRYMFQGSGLPTFLWWGLMFTVAYVANRSPHSPLEMVIPYKKLFGEEANLKHLCIIKAKAIVHIERHTKKLEPRPGRDFSAAI-MTTASYRVLNPTSKRVLGSRNVTFIE 149
            R+ C  +A K E+A TNTPQ++G SERDG+TLA + R + +    P  +W  LM T AY+ NRSPHS L    PY KL  +  +L  L +I A+A VH ER+ KKL+ R          + + +YRVLNP++  V+ SRNVTFIE
Sbjct:  185 RDYCKNSAIKLEYAATNTPQQIGGSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATPYSKLHNKSPDLSGLRVIGARAFVHHERYRKKLDDRAFEGKLCGFGLDSQTYRVLNPSNGAVVESRNVTFIE 329

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig8266.16286.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig8266.16286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KQ40_9PHAE	7.090e-35	46.21	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5JWF9_9PHAE	2.070e-34	46.90	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KF63_9PHAE	4.710e-32	44.83	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5JRJ1_9PHAE	5.370e-32	46.21	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K500_9PHAE	9.420e-32	46.21	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JJR8_9PHAE	1.000e-31	46.21	Integrase catalytic domain-containing protein n=11...	[more]
A0A6H5KCT3_9PHAE	1.010e-31	46.21	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KLG0_9PHAE	1.320e-31	46.21	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5JSL6_9PHAE	1.840e-31	46.21	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K1R7_9PHAE	8.510e-31	46.21	Integrase catalytic domain-containing protein (Fra...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..114 e-value: 1.0E-9 score: 39.9
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 43..66
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..42
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 67..149
None	No IPR available	TMHMM	TMhelix		coord: 44..66
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 5..93

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig8266	contig	H-paniculata_contig8266:6590..7036 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig8266.16286.1	mRNA_H-paniculata_contig8266.16286.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig8266 6590..7036 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig8266.16286.1 ID=prot_H-paniculata_contig8266.16286.1|Name=mRNA_H-paniculata_contig8266.16286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp
TPRRARELCDETATKHEFACTNTPQEVGISERDGRTLAPIVRYMFQGSGL
PTFLWWGLMFTVAYVANRSPHSPLEMVIPYKKLFGEEANLKHLCIIKAKA
IVHIERHTKKLEPRPGRDFSAAIMTTASYRVLNPTSKRVLGSRNVTFIE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR012337	RNaseH-like_sf