prot_H-paniculata_contig82598.16279.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig82598.16279.1 vs. uniprot
Match: A0A438JWQ6_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JWQ6_VITVI) HSP 1 Score: 53.5 bits (127), Expect = 7.850e-7 Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 0
Query: 3 LPQAEKWKLAMNKEMSSFQTNRVYDLVLQNEIPAGLKSIGLRWVYKVKSDN 53
L ++E W AM EMSS + N V+DLV E+P G KSIG +WV+K+K D+
Sbjct: 170 LQESELWYNAMKDEMSSMRCNNVWDLV---ELPNGAKSIGCKWVFKIKKDS 217
BLAST of mRNA_H-paniculata_contig82598.16279.1 vs. uniprot
Match: A0A1X7U495_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U495_AMPQE) HSP 1 Score: 53.1 bits (126), Expect = 1.090e-6 Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0
Query: 1 MNLPQAEKWKLAMNKEMSSFQTNRVYDLVLQNEIPAGLKSIGLRWVYKVKS 51
M + EKW AM +EM S ++N+V++LV E+P G K IG +WVYKVK+
Sbjct: 829 MTSNEREKWSEAMEREMKSIESNKVWELV---ELPEGKKPIGCKWVYKVKT 876
BLAST of mRNA_H-paniculata_contig82598.16279.1 vs. uniprot
Match: A0A3L6T4V2_PANMI (Uncharacterized protein n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6T4V2_PANMI) HSP 1 Score: 52.8 bits (125), Expect = 1.490e-6 Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 0
Query: 6 AEKWKLAMNKEMSSFQTNRVYDLVLQNEIPAGLKSIGLRWVYKVKSDN 53
+ KW AM EM S +TNRV+DL EIP G K++G +W+YK K D+
Sbjct: 870 SSKWFEAMEDEMKSMRTNRVWDL---EEIPEGAKTVGCKWIYKTKCDS 914
BLAST of mRNA_H-paniculata_contig82598.16279.1 vs. uniprot
Match: A0A3L6SZH4_PANMI (Integrase catalytic domain-containing protein n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6SZH4_PANMI) HSP 1 Score: 51.6 bits (122), Expect = 3.800e-6 Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 0
Query: 6 AEKWKLAMNKEMSSFQTNRVYDLVLQNEIPAGLKSIGLRWVYKVKSDN 53
+ KW AM E+ S +TNRV+DL EIP G K++G +WVYK K D+
Sbjct: 269 SSKWFEAMEDEIKSMRTNRVWDL---KEIPEGAKTVGCKWVYKTKCDS 313
BLAST of mRNA_H-paniculata_contig82598.16279.1 vs. uniprot
Match: UPI0016610B54 (hypothetical protein n=1 Tax=Serratia marcescens TaxID=615 RepID=UPI0016610B54) HSP 1 Score: 50.1 bits (118), Expect = 4.230e-6 Identity = 23/53 (43.40%), Postives = 32/53 (60.38%), Query Frame = 0
Query: 1 MNLPQAEKWKLAMNKEMSSFQTNRVYDLVLQNEIPAGLKSIGLRWVYKVKSDN 53
M + KW AM EM S TN+V+DL + IP G K++G +W+YK K D+
Sbjct: 12 MRSDHSSKWLKAMEDEMKSMSTNKVWDLEI---IPKGAKTVGCKWIYKTKYDS 61
BLAST of mRNA_H-paniculata_contig82598.16279.1 vs. uniprot
Match: UPI000E21B5FB (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Glycine max TaxID=3847 RepID=UPI000E21B5FB) HSP 1 Score: 49.7 bits (117), Expect = 4.240e-6 Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = 0
Query: 1 MNLPQAEKWKLAMNKEMSSFQTNRVYDLVLQNEIPAGLKSIGLRWVYKVKSDN 53
M+ ++ W AM E+ S +N+V+DLV E+PAG+K IG RWV+K K D+
Sbjct: 1 MSSKESNLWYNAMRDEIDSMASNQVWDLV---ELPAGVKVIGCRWVFKTKKDS 50
BLAST of mRNA_H-paniculata_contig82598.16279.1 vs. uniprot
Match: A0A3L6R887_PANMI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6R887_PANMI) HSP 1 Score: 51.2 bits (121), Expect = 5.120e-6 Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0
Query: 8 KWKLAMNKEMSSFQTNRVYDLVLQNEIPAGLKSIGLRWVYKVKSDN 53
KW AM EM S ++NRV+DL EIP G K++G +WVYK K D+
Sbjct: 253 KWFEAMEDEMKSMRSNRVWDL---EEIPEGAKTVGCKWVYKTKCDS 295
BLAST of mRNA_H-paniculata_contig82598.16279.1 vs. uniprot
Match: A0A445M227_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445M227_GLYSO) HSP 1 Score: 50.8 bits (120), Expect = 7.170e-6 Identity = 24/53 (45.28%), Postives = 37/53 (69.81%), Query Frame = 0
Query: 1 MNLPQAEKWKLAMNKEMSSFQTNRVYDLVLQNEIPAGLKSIGLRWVYKVKSDN 53
M+ ++ W AM EMSS Q+N+V++LV E+P G K+IG +WV+K K+D+
Sbjct: 1095 MSCKESNLWYDAMKDEMSSMQSNKVWNLV---ELPNGAKAIGCKWVFKTKNDS 1144
BLAST of mRNA_H-paniculata_contig82598.16279.1 vs. uniprot
Match: B5U9F7_SOYBN (Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max TaxID=3847 RepID=B5U9F7_SOYBN) HSP 1 Score: 50.4 bits (119), Expect = 9.800e-6 Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 0
Query: 1 MNLPQAEKWKLAMNKEMSSFQTNRVYDLVLQNEIPAGLKSIGLRWVYKVKSDN 53
M+ ++ W AM EMSS Q+N+V++LV E+P G K+IG +WV+K K D+
Sbjct: 807 MSCKESNLWYDAMKDEMSSMQSNKVWNLV---ELPNGAKAIGCKWVFKTKKDS 856
BLAST of mRNA_H-paniculata_contig82598.16279.1 vs. uniprot
Match: A0A453NGN6_AEGTS (Uncharacterized protein n=3 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453NGN6_AEGTS) HSP 1 Score: 50.1 bits (118), Expect = 1.340e-5 Identity = 22/46 (47.83%), Postives = 34/46 (73.91%), Query Frame = 0
Query: 7 EKWKLAMNKEMSSFQTNRVYDLVLQNEIPAGLKSIGLRWVYKVKSD 52
E W+ AM++E+ S + N+V++L ++P G K+IGL+WVYKVK D
Sbjct: 724 EYWRRAMDEELGSIRDNKVWELA---DLPNGHKTIGLKWVYKVKKD 766 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig82598.16279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig82598.16279.1 ID=prot_H-paniculata_contig82598.16279.1|Name=mRNA_H-paniculata_contig82598.16279.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=56bpback to top |