prot_H-paniculata_contig8253.16271.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8253.16271.1
Unique Nameprot_H-paniculata_contig8253.16271.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
BLAST of mRNA_H-paniculata_contig8253.16271.1 vs. uniprot
Match: UPI001CB79F24 (hypothetical protein n=1 Tax=Blastococcus sp. CPCC 205250 TaxID=2732513 RepID=UPI001CB79F24)

HSP 1 Score: 76.3 bits (186), Expect = 3.210e-15
Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 0
Query:    1 MRSMVNNGVWEQIARPKDMLVVGAKMLYERKASKDGKMEKYKCRLVAQGLRQIEGVHYTEKYSPMPANASMRMLLATAAAKDGEL 85
            M+S+  N  W  +  PKD   +G K +++RK   +GK+ KYK RLVA+G  QIEGV Y E +SP+    S+R +L+ AAA D E+
Sbjct:  101 MKSLDQNHTWNLVKLPKDRKAIGCKWVFKRKQDAEGKIGKYKARLVAKGYAQIEGVDYAEIFSPVAKLTSIRTVLSAAAAYDLEI 185          
BLAST of mRNA_H-paniculata_contig8253.16271.1 vs. uniprot
Match: A0A7S3Y1L1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1L1_HETAK)

HSP 1 Score: 75.1 bits (183), Expect = 5.850e-14
Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    3 SMVNNGVWEQIARPKDMLVVGAKMLYERKASKDGKMEKYKCRLVAQGLRQIEGVHYTEKYSPMPANASMRMLLATAAAKDGEL 85
            S++ + VWE + +P    +VG + +  +K   DG + KYK RL AQG  QIEGV YT  +SP+ ++AS+R +L  AA++D E+
Sbjct:  256 SLLRHNVWELVDKPSGANIVGCRWILAKKYDADGNLSKYKARLCAQGYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEI 338          
BLAST of mRNA_H-paniculata_contig8253.16271.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 75.1 bits (183), Expect = 6.960e-14
Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = 0
Query:    3 SMVNNGVWEQIARPKDMLVVGAKMLYERKASKDGKMEKYKCRLVAQGLRQIEGVHYTEKYSPMPANASMRMLLATAAAKDGEL 85
            S++ + VWE + +P    +VG + +  +K   DG + KYK RL AQG  QIEGV YT  +SP+ ++AS+R +L  AA++D E+
Sbjct:  509 SLLRHNVWELVDKPSGANIVGCRWILAKKYDADGNLSKYKARLCAQGYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEI 591          
BLAST of mRNA_H-paniculata_contig8253.16271.1 vs. uniprot
Match: A0A7D9D6Q5_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D6Q5_PARCT)

HSP 1 Score: 74.7 bits (182), Expect = 9.510e-14
Identity = 36/83 (43.37%), Postives = 57/83 (68.67%), Query Frame = 0
Query:    3 SMVNNGVWEQIARPKDMLVVGAKMLYERKASKDGKMEKYKCRLVAQGLRQIEGVHYTEKYSPMPANASMRMLLATAAAKDGEL 85
            S++ N  WE ++ PK   VVG+K +++ K  ++G +++YK RLVAQG  Q EGV Y+E +SP+  N ++R LLA + AK+ E+
Sbjct:  835 SLIENETWELVSLPKGKNVVGSKWVFKVKTDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEV 917          
BLAST of mRNA_H-paniculata_contig8253.16271.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT)

HSP 1 Score: 74.3 bits (181), Expect = 1.300e-13
Identity = 36/83 (43.37%), Postives = 57/83 (68.67%), Query Frame = 0
Query:    3 SMVNNGVWEQIARPKDMLVVGAKMLYERKASKDGKMEKYKCRLVAQGLRQIEGVHYTEKYSPMPANASMRMLLATAAAKDGEL 85
            S++ N  WE ++ PK   VVG+K +++ K  ++G +++YK RLVAQG  Q EGV Y+E +SP+  N ++R LLA + AK+ E+
Sbjct:  748 SLIENETWELVSLPKGKNVVGSKWVFKVKRDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEV 830          
BLAST of mRNA_H-paniculata_contig8253.16271.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 73.2 bits (178), Expect = 3.240e-13
Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 0
Query:    1 MRSMVNNGVWEQIARPKDMLVVGAKMLYERKASKDGKMEKYKCRLVAQGLRQIEGVHYTEKYSPMPANASMRMLLATAAAKDGEL 85
            ++++ +NG W  +  P +   VG K +Y+ K + DGK+E+YK RLVA+G  QIEG  Y E +SP+     +RM  A AAA++  L
Sbjct:  180 LKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSPVARQTIVRMFFALAAAQNWRL 264          
BLAST of mRNA_H-paniculata_contig8253.16271.1 vs. uniprot
Match: A0A2I4GRT0_JUGRE (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Juglans regia TaxID=51240 RepID=A0A2I4GRT0_JUGRE)

HSP 1 Score: 69.3 bits (168), Expect = 4.790e-13
Identity = 32/79 (40.51%), Postives = 52/79 (65.82%), Query Frame = 0
Query:    7 NGVWEQIARPKDMLVVGAKMLYERKASKDGKMEKYKCRLVAQGLRQIEGVHYTEKYSPMPANASMRMLLATAAAKDGEL 85
            N  W+ ++R  DM V+G+K +Y+ K   DG +E+ K RLVA+G  Q++GV ++E +SP+   A++RM+L  A  K+  L
Sbjct:   55 NQTWKLVSRTADMNVIGSKWVYKAKLKADGTLERLKARLVAKGFSQVDGVDFSETFSPVVKPATIRMVLTIATVKNWAL 133          
BLAST of mRNA_H-paniculata_contig8253.16271.1 vs. uniprot
Match: UPI00090552C3 (uncharacterized protein LOC109208296 n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=UPI00090552C3)

HSP 1 Score: 68.6 bits (166), Expect = 5.920e-13
Identity = 31/85 (36.47%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    1 MRSMVNNGVWEQIARPKDMLVVGAKMLYERKASKDGKMEKYKCRLVAQGLRQIEGVHYTEKYSPMPANASMRMLLATAAAKDGEL 85
            ++++ +N  WE +  P    ++G+K +Y+ K + +GK+E++K RLVA+G  Q EG+ Y E +SP+    ++R ++A AA+KD +L
Sbjct:   24 VKALEDNRTWEVVPIPVGKFIIGSKWVYKIKYNSNGKVERFKARLVAKGYNQQEGLDYHETFSPVSKMVTVRSVIAIAASKDWKL 108          
BLAST of mRNA_H-paniculata_contig8253.16271.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 72.0 bits (175), Expect = 8.520e-13
Identity = 35/77 (45.45%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    9 VWEQIARPKDMLVVGAKMLYERKASKDGKMEKYKCRLVAQGLRQIEGVHYTEKYSPMPANASMRMLLATAAAKDGEL 85
            +++++ RP++  VV  K ++  K   DGK++KYK RLVA+G  Q+EGV YT+ ++P+   AS+RMLLA AA  D E+
Sbjct:  995 LYDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAAKHDLEV 1071          
BLAST of mRNA_H-paniculata_contig8253.16271.1 vs. uniprot
Match: A0A6D2JNC7_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JNC7_9BRAS)

HSP 1 Score: 68.2 bits (165), Expect = 9.630e-13
Identity = 35/84 (41.67%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    3 SMVNNGVWEQIARPKDMLVVGAKMLYERKASKDG-KMEKYKCRLVAQGLRQIEGVHYTEKYSPMPANASMRMLLATAAAKDGEL 85
            S++ N  W+ I +P    VVG+K LY  K+   G +++++KCRLVAQG  Q EGV Y E +SP+  + S+R++L+    +D EL
Sbjct:   29 SLMKNHTWDLIDKPDGARVVGSKWLYTIKSGIPGVELKRFKCRLVAQGFSQTEGVDYNEIFSPVVKHVSIRIMLSAVVNRDYEL 112          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8253.16271.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001CB79F243.210e-1544.71hypothetical protein n=1 Tax=Blastococcus sp. CPCC... [more]
A0A7S3Y1L1_HETAK5.850e-1442.17Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Y1P1_HETAK6.960e-1442.17Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7D9D6Q5_PARCT9.510e-1443.37Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9HXK4_PARCT1.300e-1343.37Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A061F8M9_THECC3.240e-1341.18Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A2I4GRT0_JUGRE4.790e-1340.51uncharacterized mitochondrial protein AtMg00820-li... [more]
UPI00090552C35.920e-1336.47uncharacterized protein LOC109208296 n=1 Tax=Nicot... [more]
A0A060SSE0_PYCCI8.520e-1345.45Integrase catalytic domain-containing protein n=1 ... [more]
A0A6D2JNC7_9BRAS9.630e-1341.67Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..81
e-value: 2.7E-13
score: 50.1
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..82
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 1..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8253contigH-paniculata_contig8253:6877..7134 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8253.16271.1mRNA_H-paniculata_contig8253.16271.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8253 6847..7596 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8253.16271.1 ID=prot_H-paniculata_contig8253.16271.1|Name=mRNA_H-paniculata_contig8253.16271.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
MRSMVNNGVWEQIARPKDMLVVGAKMLYERKASKDGKMEKYKCRLVAQGL
RQIEGVHYTEKYSPMPANASMRMLLATAAAKDGEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like