prot_H-paniculata_contig8247.16266.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8247.16266.1
Unique Nameprot_H-paniculata_contig8247.16266.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length157
Homology
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A1M2W5L7_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2W5L7_TRAPU)

HSP 1 Score: 82.8 bits (203), Expect = 3.550e-17
Identity = 47/116 (40.52%), Postives = 62/116 (53.45%), Query Frame = 0
Query:   40 YRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSEQN----GNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCR 151
            ++M+DLG  S +LG   RRDRP   I  SQ  YI  VL R    +C+    P+  +VK SA D  D  +  +    G+S  Y  ++ S+MYA+ GT PDIAY V    R   NP R
Sbjct:   12 FKMRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVKPSANDPEDNTTLHSIMIDGHSVSYASVIGSMMYAMMGTHPDIAYLVGVLGRYSANPKR 127          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A6D2JMB2_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JMB2_9BRAS)

HSP 1 Score: 87.0 bits (214), Expect = 6.180e-17
Identity = 47/126 (37.30%), Postives = 73/126 (57.94%), Query Frame = 0
Query:   31 ILFHNINQCYRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSEQ-NGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFS 155
            ++  ++++ + MKDLG  SR+LG +  RDR  G +  SQ SYI +VLK  D  + +    P+    K+ +   A++  E  +  +  Y   V SLMYA+ G+RPD+AYAV   +R M NP RE ++
Sbjct: 1149 LIKESLSRKFEMKDLGKASRILGMDIIRDREKGTLKLSQESYIEKVLKAFDMADAKSTTTPLATHFKLKSLTKAERKEEVVHMENKPYASAVGSLMYAMIGSRPDLAYAVGVISRFMSNPGREHWT 1274          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A6A2X507_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2X507_HIBSY)

HSP 1 Score: 85.9 bits (211), Expect = 1.490e-16
Identity = 54/158 (34.18%), Postives = 80/158 (50.63%), Query Frame = 0
Query:    1 MDVDTAYLNAPLKEELIFRLPLEFSPS-------SRNILFHNINQCYRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSEQNGN--STGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNP 149
            +DV T +L+  L+E +  R P  F  +       SR +L H   + + MKDLG+   +LG   +RD  +G +  SQ  YI +VL R +  + + V  P+    ++S   S  K  E+  +     Y   +RSLMYA+  TRPDIA  V   +R M NP
Sbjct:  541 LDVKTVFLHGDLEEAIYMRQPEGFIQAGKKNLMPSRPLLLHQ--EQFAMKDLGAAKHILGMRIKRDTKSGTLMLSQAEYINKVLSRFNMQDAKPVSTPLGFHFRVSKEQSP-KTEEERAHMVKVSYASAIRSLMYAIVCTRPDIAQVVGVVSRYMNNP 695          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A6D2LC14_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2LC14_9BRAS)

HSP 1 Score: 85.9 bits (211), Expect = 1.550e-16
Identity = 44/122 (36.07%), Postives = 73/122 (59.84%), Query Frame = 0
Query:   31 ILFHNINQCYRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSEQN-GNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCR 151
            +L  +++  + MKDLGS +R+LG +  RDR  GI+  SQ  Y+++VL+  +  +C+ V++P     K+ +    +  +E    +S  Y   V SLMYA+ G+RPD+A+A+   +R M NP R
Sbjct: 1060 VLKSSLSMTFEMKDLGSATRILGMDIIRDRKKGILKLSQERYLKKVLRTFNMEDCKAVVSPCNSQFKLKSLTQQELITESGLMDSVPYASAVGSLMYAMIGSRPDLAFAICLVSRFMANPGR 1181          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A2W0BH45_9BACT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2W0BH45_9BACT)

HSP 1 Score: 83.2 bits (204), Expect = 1.930e-16
Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 0
Query:   22 LEFSPSSR--NILFHNINQCYRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSEQNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCRE 152
            L+FSPS    N +   + + Y+M DLG  S+ LG E  RDR +  +   Q +YI+ VLKR   ++C GV  P+E   ++ A D      E +     Y+  + S+MYA+ GTRPD+AY +   ++   NP  E
Sbjct:   51 LQFSPSRNAINTIKSQLMKRYKMTDLGPASQFLGLEISRDRESRTLHLHQSTYIKHVLKRFQMDQCNGVSTPMEPNARLHAADEGYIALEND--ILEYQQALGSIMYAMLGTRPDLAYPISSLSKFSINPSFE 181          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: Q9AUZ1_ARATH (Polyprotein, putative n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9AUZ1_ARATH)

HSP 1 Score: 85.1 bits (209), Expect = 2.750e-16
Identity = 45/125 (36.00%), Postives = 70/125 (56.00%), Query Frame = 0
Query:   25 SPSSRNILFHNINQCYRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSEQNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNP 149
            S +  N++   ++  + MKD+G  SR+LG +  RDR  GI+  SQ  YIR++++R + +E R V  P+    K+ A    D+  +       Y   V S+MYA+ GTRPD+AYA+   +R M  P
Sbjct:  724 SKAEVNMIKEQLSVEFEMKDMGPASRILGKDITRDRKKGILRLSQAPYIRKIVQRFNLDEARVVRTPIGAHFKLPAVREDDECIDTE--QVPYSSAVGSIMYAMIGTRPDLAYAICLVSRYMSRP 846          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A1M2VT18_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trametes TaxID=5324 RepID=A0A1M2VT18_TRAPU)

HSP 1 Score: 84.7 bits (208), Expect = 3.960e-16
Identity = 48/116 (41.38%), Postives = 62/116 (53.45%), Query Frame = 0
Query:   40 YRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSEQN----GNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCR 151
            ++M+DLG  S +LG   RRDRP   I  SQ  YI  VL R    +C+    P+  +VK SA D  D  +  +    G S  Y  ++ S+MYA+ GTRPDIAY V    R   NP R
Sbjct: 1203 FKMRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVKPSADDPEDNTTLHSITIEGRSVSYASVIGSMMYAMMGTRPDIAYLVGVLGRYSANPKR 1318          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A6A2YEH9_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YEH9_HIBSY)

HSP 1 Score: 83.6 bits (205), Expect = 9.990e-16
Identity = 45/120 (37.50%), Postives = 73/120 (60.83%), Query Frame = 0
Query:   40 YRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKIS---APDSADKPSEQNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST 156
            + MKDLGS +++LG +  RDR N  I  SQ +Y++++L R +  +C+ +  P+    K+S   +P S ++  E +     Y   VRSLM+A+  TRPDI+ AV   +R M+NP +E ++T
Sbjct: 1173 FEMKDLGSTNKILGMQIHRDRSNRKIWLSQKNYLKKILSRFNMQDCKPISTPLPINFKLSFSMSPSSKEERMEMS--RVLYASTVRSLMFAMICTRPDISQAVGVVSRYMENPGKEHWNT 1290          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR)

HSP 1 Score: 83.6 bits (205), Expect = 1.000e-15
Identity = 50/116 (43.10%), Postives = 65/116 (56.03%), Query Frame = 0
Query:   40 YRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPD--SADKPSEQ--NGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCR 151
            ++M+DLG  S VLG + RRDR   II  SQ  YI  VLKR    +C+ V  P+    +++A D  + D  +E   N  +  Y  +V SLMYA+ GTRPDIAYA     R   NP R
Sbjct: 1223 FKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVLKRCGMEDCKPVFTPLSTQNRLTADDPINNDTLTEMTINNKTVSYATVVGSLMYAMMGTRPDIAYATGLLGRFSTNPKR 1338          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A6A3AF48_HIBSY (BTB/POZ domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3AF48_HIBSY)

HSP 1 Score: 83.6 bits (205), Expect = 1.000e-15
Identity = 46/120 (38.33%), Postives = 70/120 (58.33%), Query Frame = 0
Query:   40 YRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISA---PDSADKPSEQNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST 156
            + MKDLGS +++LG +  RDR N  I  SQ +Y++++L R    +C+ +  P+    K+S+   P S D+  E +     Y   VRSLM+ +  TRPDIA AV   +R M NP +E ++T
Sbjct:  808 FEMKDLGSANKILGMQIHRDRSNRKIWLSQKNYLKKILSRFSMQDCKPISTPLPINFKLSSSMTPSSEDERMEMS--RVPYASAVRSLMFDMICTRPDIAQAVGVVSRYMANPGKEHWNT 925          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1M2W5L7_TRAPU3.550e-1740.52Retrovirus-related Pol polyprotein from transposon... [more]
A0A6D2JMB2_9BRAS6.180e-1737.30Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A6A2X507_HIBSY1.490e-1634.18Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A6D2LC14_9BRAS1.550e-1636.07Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]
A0A2W0BH45_9BACT1.930e-1636.09Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q9AUZ1_ARATH2.750e-1636.00Polyprotein, putative n=1 Tax=Arabidopsis thaliana... [more]
A0A1M2VT18_TRAPU3.960e-1641.38Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A2YEH9_HIBSY9.990e-1637.50Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A409WVI7_9AGAR1.000e-1543.10Integrase catalytic domain-containing protein (Fra... [more]
A0A6A3AF48_HIBSY1.000e-1538.33BTB/POZ domain-containing protein n=1 Tax=Hibiscus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF257coord: 2..149
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8247contigH-paniculata_contig8247:2377..3114 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8247.16266.1mRNA_H-paniculata_contig8247.16266.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8247 1900..3297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8247.16266.1 ID=prot_H-paniculata_contig8247.16266.1|Name=mRNA_H-paniculata_contig8247.16266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
MDVDTAYLNAPLKEELIFRLPLEFSPSSRNILFHNINQCYRMKDLGSLSR
VLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISA
PDSADKPSEQNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPC
REDFST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like