mRNA_H-paniculata_contig8247.16266.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM) HSP 1 Score: 244 bits (622), Expect = 2.100e-68 Identity = 158/450 (35.11%), Postives = 212/450 (47.11%), Query Frame = 1
Query: 1 IFNRKLKEDGSVARYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFSPSSRNILFHNINQCYRMK-------------------------------------------------------------------------DLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSEQNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADIV 1131
+F K G++ YK R+VA+GF+ VEG F ET APV + ++LRT+ LTA+H EL MDV TAYLN L+EE+ P F NI++ I Y +K DLG + +LG E RDR I+T SQ YI +VL+R F + R + PV K+ +A+ + + Y+ V SLMYA+ GTRPDIAYAV ++ P E ++ R F+Y D + GK L G+VD+DWA D DR+S +GYVF L G AISW S KQQ + SSTEAEY+AA KE + L LL + R T L DN+ I L K H TKHI V H +R+ + +G +A +Y+ T DQ AD++
Sbjct: 944 VFRIKRGPTGAIECYKARVVAKGFTQVEGIDFDETFAPVMKFNSLRTLLALTAKHDLELHQMDVKTAYLNGDLEEEIYMEPPPGFRGDG-NIVWRLIKSIYGLKQAGRVWYMRIEREFRDLGYSRSYADYGVFVFHRDSDGTLLIIIIYVDDIGAASNSMEAILQAKARLSKIFEITDLGEMRWILGMEVTRDRALKIVTLSQKRYIADVLERHGFADARPISTPVSVNQKLEKLPAAEIDARK------YQSAVGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIERPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYIPTADQVADVL 1386
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 228 bits (582), Expect = 2.750e-66 Identity = 144/451 (31.93%), Postives = 213/451 (47.23%), Query Frame = 1
Query: 1 IFNRKLKEDGSVARYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEF-SPSSRNILFHNINQCYRMK------------------------------------------------------------------------DLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSEQNG-NSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADIV 1131
+F K G++A+YK RLVAQGFS + G + +T APVA++S++R + L A +EL MDV AYLN L+EE+ + P F +P + H Y +K DLG + +LG E +RDR I+ Q +YI +L R + + + + ++ + ++ S P + + + YR + SLMYA GTRPD++YAV ++ M+NP + KR RY + + GG N +G+EGF DADW + R+S +GYVF ++GGA+SW S KQ ++ SSTEAEYVA KE + LG I + TTL+ DN+S I L K + H RTKHI + +H IR+ + G + + Y T D AD++
Sbjct: 79 VFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAIVAVSVDDLAIAANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGG-DNANGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERGEVDIVYCPTADMAADVL 527
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A0C9VSW1_SPHS4 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VSW1_SPHS4) HSP 1 Score: 228 bits (580), Expect = 1.350e-64 Identity = 150/443 (33.86%), Postives = 206/443 (46.50%), Query Frame = 1
Query: 4 FNRKLKEDGSVARYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFSP-------------------------------------SSRNILF--------------------------------HNINQCYRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSEQNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRAD 1125
F K G + RYK RLVA+GF+ V+G + E APV + +++RT+ LT E E+ MDV TA+LN LKEE+ LP F +S + +F ++ + M DLG +LG E RDRP+ ++ SQ +Y E+L+R ++C+ P+E V + K SE +S Y+ V SLMY + GT PD+A++V ++ P E KR RY DLG+ G N +E F+DADWA+D +R S TGYV L G ISW S KQ SSTEAEY+AA KE + L + +G T L+ DN+S I L+K S H RTKHI V +H IRE + + + L Y+ T DQ AD
Sbjct: 255 FKEKRGPKGEILRYKARLVAKGFTQVKGVDYNEMFAPVVKFTSIRTLLALTTELDLEIHQMDVKTAFLNRDLKEEIYMNLPPGFRKPGVIWKLKKGLYGLKQASREWYKKLCTEFESMGFRRCNSNHAVFIKDDNGIRVVVAVYVDDLLIFSSSIEAVKKVKKDLKGKFEMTDLGEAHWILGMEITRDRPSHTLSISQKAYFAEILERFGMSDCKPAPTPMEVGVSLR------KLSEAEVDSQHYQSAVGSLMYGMIGTHPDVAHSVGVLSQHCATPGEEHEKGNKRVLRYIKGTTDLGLVFIGSGNTK-IEVFIDADWAQDKNNRHSLTGYVCTLAGATISWSSKKQSSTAQSSTEAEYMAATHAAKEALWLRMFMRELGFEQDSPTPLYVDNQSAITLVKNSEFHSRTKHINVRYHFIRENVEDEQIELVYIPTEDQVAD 690
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A2N9FUY1_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FUY1_FAGSY) HSP 1 Score: 223 bits (569), Expect = 2.700e-64 Identity = 137/418 (32.78%), Postives = 208/418 (49.76%), Query Frame = 1
Query: 1 IFNRKLKEDGSVARYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFSP------------------SSRNILFHNI----------------------NQCYRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSEQNGNS-TGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRR--STTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRAD 1125
+ K K DGS+ RYK RLVA+G++ EG + +T +PV R +++R + ++ A+ EL MDV TA+LN L EE+ P F S R+IL ++ + + MKD+G + VLG + RDR +++ SQ +YI+++L+R + + + P+E+ +S E+N S Y +RSLMYA+ TRPDI +AV +R NP + KR RY D + G L G+ DADWA D ++RKST+GY F L GGA+SWCS KQ I S+ E+EYVA +E + L L +G+ + L+ D+ S + K H + KHI + +H IR+ + +G + L+++ TG AD
Sbjct: 121 VLKVKRKADGSIDRYKARLVAKGYTQREGIDYEDTFSPVVRFASIRLILSIVAKQDLELFQMDVKTAFLNGELDEEIYMAQPAGFEAKGHERKMIEEDHCMYLKRSKRSILILSLYVDDILLVGNDMDSIVTTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDTPMEKGCTLSLDQCPKNDEEKNQMSKVPYASAIRSLMYAMLCTRPDICFAVGMVSRYQSNPGPAHWRAVKRILRYLRGTSDHALCYHGGDLR--LTGYSDADWASDKDERKSTSGYAFILGGGAVSWCSKKQSCIALSTMESEYVACSAAVQEAVWLRRFLQRLGVTAHAEDAVLLYSDSTSALAYAKDPKYHGKAKHIELRYHYIRDMVSQGEVILQHISTGSMVAD 536
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A2N9EIR8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EIR8_FAGSY) HSP 1 Score: 231 bits (590), Expect = 2.780e-64 Identity = 140/387 (36.18%), Postives = 208/387 (53.75%), Query Frame = 1
Query: 40 RYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFSPSSRNILF----------------------HNINQCYRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSE-QNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADIV 1131
R+K RLVA+G+S G + E +PV R +++R V L A ELE +DV TA+L+ L+EE+ P F + +F +++ + MKDLG+ ++LG E RRDR + SQ +YIR+VL++ + + V P+ ++S+ E +N + Y V LMYA+ TRPD+A+AV +R M NP RE ++ K FRY + GI + + + G+VDAD+A +V+DR+STTGYVF L+GG I W S Q ++ S+TEAEY+A E KE + L L+ +GL + + D++S I L K H RTKHI V +H IRE I G + L+ V T + AD++
Sbjct: 755 RFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLTLVANQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPDGSYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGAAKKILGMEIRRDREARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSSSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPRREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAIAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADML 1140
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A2N9GEP0_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GEP0_FAGSY) HSP 1 Score: 226 bits (577), Expect = 4.960e-64 Identity = 138/372 (37.10%), Postives = 206/372 (55.38%), Query Frame = 1
Query: 40 RYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFS-PSSRNI------LFHNINQCYRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSE-QNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADIV 1131
R+K RLVA+G+S G + E +PV R +++R V L A+ ELE +DV TA+L+ L+EE+ P F P + N+ L + + + MKDLG+ ++LG E RDR + SQ +YI++VL++ + + V + ++S E +N + Y V LMYA+ TRPD+A+AV +R M NP RE ++ K FRY + GI + + + G+VDAD+A +V+DR+STTGYVF L+ G I W S Q ++ S+TEAEY+A E KE + L L+ +GL + + D++S I L K H RTKHI V +H IRE I G + L+ V T + AD++
Sbjct: 349 RFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMVQPEGFKQPGTENLVCRLKKLKSLLYKEFEMKDLGAAKKILGMEIHRDRDARKLWLSQKNYIKKVLEKFSMLDAKPVSTSLANHFRLSGSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSEGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADML 719
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI) HSP 1 Score: 231 bits (588), Expect = 7.530e-64 Identity = 153/450 (34.00%), Postives = 218/450 (48.44%), Query Frame = 1
Query: 1 IFNRKLKEDGSVARYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFSPS---------------------------SRNILFHNINQC--------------------------------------------YRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSE-QNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSI--GLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADI 1128
+F K DGS+ ++K RLVAQG++ + G F ET APVA++S++RT+ L A + +ELE M+V +AYLN L EE+ R P +P+ S + +C + M DLG++ +LG E +RDR I SQ +YI V R + V P++ ++ S P + + ++ YR V SLMYA+ GTRPDIA+AV ++ M+NP R + KR RY +L + G +G ++GF DADW E R S +GYVF L+GGAISW S KQ ++ SSTEAEY+A KE + L LL I + R TLF DN+S I L K + H RTKHI + +H IRE + + + L++ +T D AD+
Sbjct: 1013 VFRIKRDADGSITQFKARLVAQGYTQMPGVDFNETFAPVAKLSSIRTILALAARYDWELEQMEVKSAYLNGRLDEEIYMRQPPGSAPAGLEHLVCCLKKTLYGLKQAGRGWYKTLSNRMAEMGFTRCASDHAVWYKRAGDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARFNLETANPVSTPLQPGGVLTRSQSPSTPHQVADMSNVPYREAVGSLMYAVMGTRPDIAFAVTTLSQFMQNPGRAHWEAVKRVIRYLVGTRELWLVYGTSDDG--IQGFSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHAAKEALWLRYLLSDIIHPDISRYPLTLFSDNRSAIALAKDNAFHPRTKHIDIRFHFIREAVDDEKIILQHRRTEDMPADL 1460
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A8H7NTQ9_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NTQ9_9APHY) HSP 1 Score: 229 bits (585), Expect = 1.210e-63 Identity = 150/448 (33.48%), Postives = 208/448 (46.43%), Query Frame = 1
Query: 1 IFNRKLKEDGSVARYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEF-----------------SPSSR-----------------------------------------------------NILFHNINQCYRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVK-ISAPDSADKPSEQNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADIV 1131
+F K DG + +YK RLVA+GF+ VEG F ET APVA+ +++RT+ L A+ E+ MDV +A+LN L+EE+ P F +SR N L N+ + M DLG +L E RDRP ++ SQ Y+ + L+R +CR V P+ + K + P + P Y+ + SLMYA+ TRPD+A+AV ++ P +E + R +RY D + G + L G+VDADWA D+ DR+S TG+VF ++G A++W S KQ SSTEAEY+A KE I L L IG ST L DN+S I L K H RTKHI V +H IRE G + +YV TG+Q AD++
Sbjct: 673 VFKIKRGPDGEIKKYKARLVAKGFTQVEGIDFTETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLEEEIYMNAPPGFRLNANIIWRLRKALYGLKQASREWYKRIRAEFERLGFTMCESDHSVFYKVDNGTLVIIAIYVDDMLILSDDIDAVNTLKANLKSRFEMTDLGEARWILSMEILRDRPRRLLELSQHQYVEKALERHGMADCRPVSTPMAQNQKHLKLPQAEIDPKP-------YQSALGSLMYAMLRTRPDLAFAVGALSQHAATPGKEHWHALMRVYRYLRGTSDRRLVYNGTAKEKHLLGYVDADWAADINDRRSVTGFVFLISGAAVTWSSKKQSSTAQSSTEAEYMAGAHGTKEAIWLRAFLSEIGQAISGSTPLLIDNQSAIALAKNPEFHNRTKHIAVRYHFIREKYDSGDITPEYVPTGNQVADVL 1113
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A2N9GFK1_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GFK1_FAGSY) HSP 1 Score: 229 bits (585), Expect = 1.370e-63 Identity = 141/384 (36.72%), Postives = 210/384 (54.69%), Query Frame = 1
Query: 40 RYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFS-PSSRNIL------FHNINQC------------YRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSE-QNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADIV 1131
R+K RLVA+G+S G + E +PV R +++R V L A+ ELE +DV TA+L+ L+EE+ P F P + N++ + + Q + MKDLG ++LG E RRDR + SQ +YIR+VLK+ + + V P+ ++S E +N + Y V LMYA+ TRPD+A+A+ +R M NP RE ++ K FRY + GI +S + + G+VDAD+A +V+DR+STTGYVF L+GG I W S Q ++ S+TEAEY+A E KE + L L+ + L + + D++SVI L + H +TKHI V +H IRE I G + L+ V T + AD++
Sbjct: 768 RFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMVQPEGFKQPGTENLVCRLKKSLYGLKQSPRQWLKSLLHKEFEMKDLGVAKKILGMEIRRDRKARKLWLSQKNYIRKVLKKFSMLDAKPVSTPLANHFRLSGSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAMSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQSGTNSVVGYVDADYACEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEVLWLKGLVKELSLN-QGGVQMHCDSQSVIYLAENQVYHAKTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADML 1150
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A2N9ER08_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9ER08_FAGSY) HSP 1 Score: 228 bits (582), Expect = 3.080e-63 Identity = 141/387 (36.43%), Postives = 209/387 (54.01%), Query Frame = 1
Query: 40 RYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFS-PSSRNIL------FHNINQC---------------YRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSE-QNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADIV 1131
R+K RLVA+G+S G + E +PV R +++R V L A+ ELE +DV TA+L+ L+EE+ P F P + N++ + + Q + MKDLG+ ++LG E RRDR + SQ +YIR+VL++ + + V P+ ++S E +N + Y V LMYA+ TR D+A+AV +R M NP RE ++ K FRY + GI + + + G+VDAD+A +V+DR+STTGYVF L+GG I W S Q ++ S+TEAEY+A E KE + L L+ +GL + + D++S I L K H RTKHI V +H IRE I G + L+ V T + AD++
Sbjct: 725 RFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPGTENLVCRLKKSLYGLKQSPRQWYKRLKSLLHKEFEMKDLGAAKKILGMEIRRDRGARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSGSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRLDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADML 1110 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8247.16266.1 >prot_H-paniculata_contig8247.16266.1 ID=prot_H-paniculata_contig8247.16266.1|Name=mRNA_H-paniculata_contig8247.16266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp MDVDTAYLNAPLKEELIFRLPLEFSPSSRNILFHNINQCYRMKDLGSLSRback to top mRNA from alignment at H-paniculata_contig8247:1900..3297- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8247.16266.1 ID=mRNA_H-paniculata_contig8247.16266.1|Name=mRNA_H-paniculata_contig8247.16266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1398bp|location=Sequence derived from alignment at H-paniculata_contig8247:1900..3297- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8247:1900..3297- >mRNA_H-paniculata_contig8247.16266.1 ID=mRNA_H-paniculata_contig8247.16266.1|Name=mRNA_H-paniculata_contig8247.16266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at H-paniculata_contig8247:1900..3297- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |