mRNA_H-paniculata_contig8247.16266.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8247.16266.1
Unique NamemRNA_H-paniculata_contig8247.16266.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM)

HSP 1 Score: 244 bits (622), Expect = 2.100e-68
Identity = 158/450 (35.11%), Postives = 212/450 (47.11%), Query Frame = 1
Query:    1 IFNRKLKEDGSVARYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFSPSSRNILFHNINQCYRMK-------------------------------------------------------------------------DLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSEQNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADIV 1131
            +F  K    G++  YK R+VA+GF+ VEG  F ET APV + ++LRT+  LTA+H  EL  MDV TAYLN  L+EE+    P  F     NI++  I   Y +K                                                                         DLG +  +LG E  RDR   I+T SQ  YI +VL+R  F + R +  PV    K+    +A+  + +      Y+  V SLMYA+ GTRPDIAYAV   ++    P  E ++   R F+Y     D  +   GK     L G+VD+DWA D  DR+S +GYVF L G AISW S KQQ +  SSTEAEY+AA    KE + L  LL  +     R T L  DN+  I L K    H  TKHI V  H +R+ + +G +A +Y+ T DQ AD++
Sbjct:  944 VFRIKRGPTGAIECYKARVVAKGFTQVEGIDFDETFAPVMKFNSLRTLLALTAKHDLELHQMDVKTAYLNGDLEEEIYMEPPPGFRGDG-NIVWRLIKSIYGLKQAGRVWYMRIEREFRDLGYSRSYADYGVFVFHRDSDGTLLIIIIYVDDIGAASNSMEAILQAKARLSKIFEITDLGEMRWILGMEVTRDRALKIVTLSQKRYIADVLERHGFADARPISTPVSVNQKLEKLPAAEIDARK------YQSAVGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIERPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYIPTADQVADVL 1386          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 228 bits (582), Expect = 2.750e-66
Identity = 144/451 (31.93%), Postives = 213/451 (47.23%), Query Frame = 1
Query:    1 IFNRKLKEDGSVARYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEF-SPSSRNILFHNINQCYRMK------------------------------------------------------------------------DLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSEQNG-NSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADIV 1131
            +F  K    G++A+YK RLVAQGFS + G  + +T APVA++S++R +  L A   +EL  MDV  AYLN  L+EE+  + P  F +P     + H     Y +K                                                                        DLG +  +LG E +RDR    I+  Q +YI  +L R +  + + +   ++ +  ++   S   P + +   +  YR  + SLMYA  GTRPD++YAV   ++ M+NP    +   KR  RY     +  +  GG  N +G+EGF DADW    + R+S +GYVF ++GGA+SW S KQ ++  SSTEAEYVA     KE +     LG I     + TTL+ DN+S I L K +  H RTKHI + +H IR+ +  G + + Y  T D  AD++
Sbjct:   79 VFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAIVAVSVDDLAIAANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGG-DNANGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERGEVDIVYCPTADMAADVL 527          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A0C9VSW1_SPHS4 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VSW1_SPHS4)

HSP 1 Score: 228 bits (580), Expect = 1.350e-64
Identity = 150/443 (33.86%), Postives = 206/443 (46.50%), Query Frame = 1
Query:    4 FNRKLKEDGSVARYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFSP-------------------------------------SSRNILF--------------------------------HNINQCYRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSEQNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRAD 1125
            F  K    G + RYK RLVA+GF+ V+G  + E  APV + +++RT+  LT E   E+  MDV TA+LN  LKEE+   LP  F                                       +S + +F                                 ++   + M DLG    +LG E  RDRP+  ++ SQ +Y  E+L+R   ++C+    P+E  V +       K SE   +S  Y+  V SLMY + GT PD+A++V   ++    P  E     KR  RY     DLG+   G  N   +E F+DADWA+D  +R S TGYV  L G  ISW S KQ     SSTEAEY+AA    KE + L   +  +G      T L+ DN+S I L+K S  H RTKHI V +H IRE + +  + L Y+ T DQ AD
Sbjct:  255 FKEKRGPKGEILRYKARLVAKGFTQVKGVDYNEMFAPVVKFTSIRTLLALTTELDLEIHQMDVKTAFLNRDLKEEIYMNLPPGFRKPGVIWKLKKGLYGLKQASREWYKKLCTEFESMGFRRCNSNHAVFIKDDNGIRVVVAVYVDDLLIFSSSIEAVKKVKKDLKGKFEMTDLGEAHWILGMEITRDRPSHTLSISQKAYFAEILERFGMSDCKPAPTPMEVGVSLR------KLSEAEVDSQHYQSAVGSLMYGMIGTHPDVAHSVGVLSQHCATPGEEHEKGNKRVLRYIKGTTDLGLVFIGSGNTK-IEVFIDADWAQDKNNRHSLTGYVCTLAGATISWSSKKQSSTAQSSTEAEYMAATHAAKEALWLRMFMRELGFEQDSPTPLYVDNQSAITLVKNSEFHSRTKHINVRYHFIRENVEDEQIELVYIPTEDQVAD 690          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A2N9FUY1_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FUY1_FAGSY)

HSP 1 Score: 223 bits (569), Expect = 2.700e-64
Identity = 137/418 (32.78%), Postives = 208/418 (49.76%), Query Frame = 1
Query:    1 IFNRKLKEDGSVARYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFSP------------------SSRNILFHNI----------------------NQCYRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSEQNGNS-TGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRR--STTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRAD 1125
            +   K K DGS+ RYK RLVA+G++  EG  + +T +PV R +++R + ++ A+   EL  MDV TA+LN  L EE+    P  F                    S R+IL  ++                      +  + MKD+G  + VLG +  RDR   +++ SQ +YI+++L+R   +  + +  P+E+   +S         E+N  S   Y   +RSLMYA+  TRPDI +AV   +R   NP    +   KR  RY     D  +   G      L G+ DADWA D ++RKST+GY F L GGA+SWCS KQ  I  S+ E+EYVA     +E + L   L  +G+      +  L+ D+ S +   K    H + KHI + +H IR+ + +G + L+++ TG   AD
Sbjct:  121 VLKVKRKADGSIDRYKARLVAKGYTQREGIDYEDTFSPVVRFASIRLILSIVAKQDLELFQMDVKTAFLNGELDEEIYMAQPAGFEAKGHERKMIEEDHCMYLKRSKRSILILSLYVDDILLVGNDMDSIVTTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDTPMEKGCTLSLDQCPKNDEEKNQMSKVPYASAIRSLMYAMLCTRPDICFAVGMVSRYQSNPGPAHWRAVKRILRYLRGTSDHALCYHGGDLR--LTGYSDADWASDKDERKSTSGYAFILGGGAVSWCSKKQSCIALSTMESEYVACSAAVQEAVWLRRFLQRLGVTAHAEDAVLLYSDSTSALAYAKDPKYHGKAKHIELRYHYIRDMVSQGEVILQHISTGSMVAD 536          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A2N9EIR8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EIR8_FAGSY)

HSP 1 Score: 231 bits (590), Expect = 2.780e-64
Identity = 140/387 (36.18%), Postives = 208/387 (53.75%), Query Frame = 1
Query:   40 RYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFSPSSRNILF----------------------HNINQCYRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSE-QNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADIV 1131
            R+K RLVA+G+S   G  + E  +PV R +++R V  L A    ELE +DV TA+L+  L+EE+    P  F     + +F                        +++ + MKDLG+  ++LG E RRDR    +  SQ +YIR+VL++    + + V  P+    ++S+        E +N +   Y   V  LMYA+  TRPD+A+AV   +R M NP RE ++  K  FRY     + GI    +   + + G+VDAD+A +V+DR+STTGYVF L+GG I W S  Q ++  S+TEAEY+A  E  KE + L  L+  +GL  +    +  D++S I L K    H RTKHI V +H IRE I  G + L+ V T +  AD++
Sbjct:  755 RFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLTLVANQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPDGSYIFLLLYVDDMLIAAKSMCEVNRLKSLLHKEFEMKDLGAAKKILGMEIRRDREARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSSSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPRREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAIAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADML 1140          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A2N9GEP0_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GEP0_FAGSY)

HSP 1 Score: 226 bits (577), Expect = 4.960e-64
Identity = 138/372 (37.10%), Postives = 206/372 (55.38%), Query Frame = 1
Query:   40 RYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFS-PSSRNI------LFHNINQCYRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSE-QNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADIV 1131
            R+K RLVA+G+S   G  + E  +PV R +++R V  L A+   ELE +DV TA+L+  L+EE+    P  F  P + N+      L   + + + MKDLG+  ++LG E  RDR    +  SQ +YI++VL++    + + V   +    ++S         E +N +   Y   V  LMYA+  TRPD+A+AV   +R M NP RE ++  K  FRY     + GI    +   + + G+VDAD+A +V+DR+STTGYVF L+ G I W S  Q ++  S+TEAEY+A  E  KE + L  L+  +GL  +    +  D++S I L K    H RTKHI V +H IRE I  G + L+ V T +  AD++
Sbjct:  349 RFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMVQPEGFKQPGTENLVCRLKKLKSLLYKEFEMKDLGAAKKILGMEIHRDRDARKLWLSQKNYIKKVLEKFSMLDAKPVSTSLANHFRLSGSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSEGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADML 719          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI)

HSP 1 Score: 231 bits (588), Expect = 7.530e-64
Identity = 153/450 (34.00%), Postives = 218/450 (48.44%), Query Frame = 1
Query:    1 IFNRKLKEDGSVARYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFSPS---------------------------SRNILFHNINQC--------------------------------------------YRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSE-QNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSI--GLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADI 1128
            +F  K   DGS+ ++K RLVAQG++ + G  F ET APVA++S++RT+  L A + +ELE M+V +AYLN  L EE+  R P   +P+                           S  +      +C                                            + M DLG++  +LG E +RDR    I  SQ +YI  V  R +      V  P++    ++   S   P +  + ++  YR  V SLMYA+ GTRPDIA+AV   ++ M+NP R  +   KR  RY     +L +  G   +G  ++GF DADW    E R S +GYVF L+GGAISW S KQ ++  SSTEAEY+A     KE + L  LL  I    + R   TLF DN+S I L K +  H RTKHI + +H IRE + +  + L++ +T D  AD+
Sbjct: 1013 VFRIKRDADGSITQFKARLVAQGYTQMPGVDFNETFAPVAKLSSIRTILALAARYDWELEQMEVKSAYLNGRLDEEIYMRQPPGSAPAGLEHLVCCLKKTLYGLKQAGRGWYKTLSNRMAEMGFTRCASDHAVWYKRAGDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARFNLETANPVSTPLQPGGVLTRSQSPSTPHQVADMSNVPYREAVGSLMYAVMGTRPDIAFAVTTLSQFMQNPGRAHWEAVKRVIRYLVGTRELWLVYGTSDDG--IQGFSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHAAKEALWLRYLLSDIIHPDISRYPLTLFSDNRSAIALAKDNAFHPRTKHIDIRFHFIREAVDDEKIILQHRRTEDMPADL 1460          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A8H7NTQ9_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NTQ9_9APHY)

HSP 1 Score: 229 bits (585), Expect = 1.210e-63
Identity = 150/448 (33.48%), Postives = 208/448 (46.43%), Query Frame = 1
Query:    1 IFNRKLKEDGSVARYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEF-----------------SPSSR-----------------------------------------------------NILFHNINQCYRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVK-ISAPDSADKPSEQNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADIV 1131
            +F  K   DG + +YK RLVA+GF+ VEG  F ET APVA+ +++RT+  L A+   E+  MDV +A+LN  L+EE+    P  F                   +SR                                                     N L  N+   + M DLG    +L  E  RDRP  ++  SQ  Y+ + L+R    +CR V  P+ +  K +  P +   P         Y+  + SLMYA+  TRPD+A+AV   ++    P +E +    R +RY     D  +   G +    L G+VDADWA D+ DR+S TG+VF ++G A++W S KQ     SSTEAEY+A     KE I L   L  IG     ST L  DN+S I L K    H RTKHI V +H IRE    G +  +YV TG+Q AD++
Sbjct:  673 VFKIKRGPDGEIKKYKARLVAKGFTQVEGIDFTETFAPVAKFASVRTLLALAAKLDLEIHQMDVKSAFLNGDLEEEIYMNAPPGFRLNANIIWRLRKALYGLKQASREWYKRIRAEFERLGFTMCESDHSVFYKVDNGTLVIIAIYVDDMLILSDDIDAVNTLKANLKSRFEMTDLGEARWILSMEILRDRPRRLLELSQHQYVEKALERHGMADCRPVSTPMAQNQKHLKLPQAEIDPKP-------YQSALGSLMYAMLRTRPDLAFAVGALSQHAATPGKEHWHALMRVYRYLRGTSDRRLVYNGTAKEKHLLGYVDADWAADINDRRSVTGFVFLISGAAVTWSSKKQSSTAQSSTEAEYMAGAHGTKEAIWLRAFLSEIGQAISGSTPLLIDNQSAIALAKNPEFHNRTKHIAVRYHFIREKYDSGDITPEYVPTGNQVADVL 1113          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A2N9GFK1_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GFK1_FAGSY)

HSP 1 Score: 229 bits (585), Expect = 1.370e-63
Identity = 141/384 (36.72%), Postives = 210/384 (54.69%), Query Frame = 1
Query:   40 RYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFS-PSSRNIL------FHNINQC------------YRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSE-QNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADIV 1131
            R+K RLVA+G+S   G  + E  +PV R +++R V  L A+   ELE +DV TA+L+  L+EE+    P  F  P + N++       + + Q             + MKDLG   ++LG E RRDR    +  SQ +YIR+VLK+    + + V  P+    ++S         E +N +   Y   V  LMYA+  TRPD+A+A+   +R M NP RE ++  K  FRY     + GI    +S  + + G+VDAD+A +V+DR+STTGYVF L+GG I W S  Q ++  S+TEAEY+A  E  KE + L  L+  + L  +    +  D++SVI L +    H +TKHI V +H IRE I  G + L+ V T +  AD++
Sbjct:  768 RFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMVQPEGFKQPGTENLVCRLKKSLYGLKQSPRQWLKSLLHKEFEMKDLGVAKKILGMEIRRDRKARKLWLSQKNYIRKVLKKFSMLDAKPVSTPLANHFRLSGSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRPDLAHAMSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQSGTNSVVGYVDADYACEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEVLWLKGLVKELSLN-QGGVQMHCDSQSVIYLAENQVYHAKTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADML 1150          
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Match: A0A2N9ER08_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9ER08_FAGSY)

HSP 1 Score: 228 bits (582), Expect = 3.080e-63
Identity = 141/387 (36.43%), Postives = 209/387 (54.01%), Query Frame = 1
Query:   40 RYKTRLVAQGFS*VEGEGFFETSAPVARISTLRTVFNLTAEHHFELEGMDVDTAYLNAPLKEELIFRLPLEFS-PSSRNIL------FHNINQC---------------YRMKDLGSLSRVLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISAPDSADKPSE-QNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPCREDFST*KRFFRYFSTVPDLGIALGGKSNGHGLEGFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSMKQQLIMWSSTEAEYVAAGETGKETI*LGDLLGSIGLVCRRSTTLFEDNKSVINLIKGSGAHCRTKHIGVCWHGIREWIREGALALKYVQTGDQRADIV 1131
            R+K RLVA+G+S   G  + E  +PV R +++R V  L A+   ELE +DV TA+L+  L+EE+    P  F  P + N++       + + Q                + MKDLG+  ++LG E RRDR    +  SQ +YIR+VL++    + + V  P+    ++S         E +N +   Y   V  LMYA+  TR D+A+AV   +R M NP RE ++  K  FRY     + GI    +   + + G+VDAD+A +V+DR+STTGYVF L+GG I W S  Q ++  S+TEAEY+A  E  KE + L  L+  +GL  +    +  D++S I L K    H RTKHI V +H IRE I  G + L+ V T +  AD++
Sbjct:  725 RFKARLVAKGYSQRHGIDYDEVFSPVVRHTSIRAVLALVADQDLELEQLDVKTAFLHGNLEEEIFMEQPEGFKQPGTENLVCRLKKSLYGLKQSPRQWYKRLKSLLHKEFEMKDLGAAKKILGMEIRRDRGARKLWLSQKNYIRKVLEKFSMLDAKPVSTPLANHFRLSGSQCPKNEEEIENMSKVPYASAVGCLMYAMVCTRLDLAHAVSTVSRYMANPGREHWNAVKWIFRYLKGTAEHGILFSRQPGTNSVVGYVDADYAGEVDDRRSTTGYVFTLSGGPICWKSTLQSIVAMSTTEAEYMAVAEAAKEALWLKGLVKELGLN-QGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKVHTSENAADML 1110          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8247.16266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y9ZJA2_9AGAM2.100e-6835.11Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y9ZVS1_9AGAM2.750e-6631.93Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0C9VSW1_SPHS41.350e-6433.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9FUY1_FAGSY2.700e-6432.78Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9EIR8_FAGSY2.780e-6436.18Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9GEP0_FAGSY4.960e-6437.10Integrase catalytic domain-containing protein n=2 ... [more]
A0A060S825_PYCCI7.530e-6434.00CCHC-type domain-containing protein n=1 Tax=Pycnop... [more]
A0A8H7NTQ9_9APHY1.210e-6333.48Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9GFK1_FAGSY1.370e-6336.72Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9ER08_FAGSY3.080e-6336.43Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8247contigH-paniculata_contig8247:1900..3297 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score79.3
Seed ortholog evalue1.7e-12
Seed eggNOG ortholog67593.Physo138918
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QHRW@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons3
Model size1131
Cds size471
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8247.16266.1prot_H-paniculata_contig8247.16266.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8247 2377..3114 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931034.8119707-UTR-H-paniculata_contig8247:1899..23761622931034.8119707-UTR-H-paniculata_contig8247:1899..2376Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8247 1900..2376 -
1691481560.041788-UTR-H-paniculata_contig8247:1899..23761691481560.041788-UTR-H-paniculata_contig8247:1899..2376Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8247 1900..2376 -
1622931034.8617547-UTR-H-paniculata_contig8247:3114..32971622931034.8617547-UTR-H-paniculata_contig8247:3114..3297Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8247 3115..3297 -
1691481560.0800722-UTR-H-paniculata_contig8247:3114..32971691481560.0800722-UTR-H-paniculata_contig8247:3114..3297Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8247 3115..3297 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931034.8232262-CDS-H-paniculata_contig8247:2376..25151622931034.8232262-CDS-H-paniculata_contig8247:2376..2515Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8247 2377..2515 -
1691481560.0563948-CDS-H-paniculata_contig8247:2376..25151691481560.0563948-CDS-H-paniculata_contig8247:2376..2515Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8247 2377..2515 -
1622931034.8353534-CDS-H-paniculata_contig8247:2578..28111622931034.8353534-CDS-H-paniculata_contig8247:2578..2811Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8247 2579..2811 -
1691481560.0646791-CDS-H-paniculata_contig8247:2578..28111691481560.0646791-CDS-H-paniculata_contig8247:2578..2811Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8247 2579..2811 -
1622931034.846047-CDS-H-paniculata_contig8247:3015..31141622931034.846047-CDS-H-paniculata_contig8247:3015..3114Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8247 3016..3114 -
1691481560.0723333-CDS-H-paniculata_contig8247:3015..31141691481560.0723333-CDS-H-paniculata_contig8247:3015..3114Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8247 3016..3114 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8247.16266.1

>prot_H-paniculata_contig8247.16266.1 ID=prot_H-paniculata_contig8247.16266.1|Name=mRNA_H-paniculata_contig8247.16266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
MDVDTAYLNAPLKEELIFRLPLEFSPSSRNILFHNINQCYRMKDLGSLSR
VLGNEARRDRPNGIITTSQCSYIREVLKRSDFNECRGVLNPVERTVKISA
PDSADKPSEQNGNSTGYRGMVRSLMYALTGTRPDIAYAVHQTARRMKNPC
REDFST*
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mRNA from alignment at H-paniculata_contig8247:1900..3297-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8247.16266.1 ID=mRNA_H-paniculata_contig8247.16266.1|Name=mRNA_H-paniculata_contig8247.16266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1398bp|location=Sequence derived from alignment at H-paniculata_contig8247:1900..3297- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTTTCAACCGGAAACTGAAGGAGGACGGCAGCGTGGCACGCTACAAAAC GCGACTGGTGGCTCAAGGCTTTTCATAGGTGGAGGGTGAAGGTTTCTTTG AAACCAGTGCCCCTGTAGCTCGCATATCGACGTTACGTACTGTTTTTAAC CTGACCGCCGAACATCATTTCGAATTAGAAGGCATGGACGTAGATACGGC GTATTTGAATGCCCCGTTAAAAGAAGAGCTGATTTTTAGGCTACCCCTCG AGTTTTCTCCTTCCTCTCGAAACATACTCTTTGTGCGCCACCTGCGTAAG AGCCTGTACGGCCTCAAGCAGAGCGGCCGCAACTGGAATAACAATCGTGA CGATTTTCTGGTTGGAATAGGACTCAACTGCTTGTACTTTTCTCGCGAGG ATGGAGCAGAGATAGATCTTCTGGCGGTCGTGTACGTTGACGACCTGGTC ACTGCTCGTCGTCGTGAGAAAGTAGACGAGTTCAAGCATAACATAAATCA GTGTTATAGGATGAAAGATTTGGGCTCTCTCTCGCGCGTGTTGGGAAACG AAGCTCGACGTGACCGCCCTAATGGTATCATAACCACCTCGCAGTGTAGC TACATCCGCGAGGTACTAAAACGAAGCGATTTTAATGAGTGTCGGGGGGT ACTCAACCCTGTAGAAAGAACAGTGAAGATTTCGGCACCCGATTCGGCCG ACAAGCCCTCCGAACAGAAGTCACTTGGGGCTGTAATGTCGGACACAGGC GCAGGAGTACAAGAAAGCAGCAGCGGGAAAAGTGGCAATTCAACTGGATA TAGAGGCATGGTAAGATCACTCATGTATGCCTTAACAGGAACTAGACCTG ATATAGCATACGCAGTACACCAAACAGCACGTCGTATGAAGAACCCATGT CGAGAAGACTTCAGTACATGAAAGCGCTTTTTTCGTTATTTCAGTACTGT GCCTGACCTCGGTATTGCGCTCGGCGGTAAGAGTAATGGTCACGGTCTGG AAGGATTTGTTGATGCCGATTGGGCGGAAGATGTAGAGGATCGAAAGTCC ACAACAGGATACGTTTTCAAACTAAACGGTGGTGCGATAAGTTGGTGCTC TATGAAGCAACAGTTAATCATGTGGTCCAGTACAGAGGCAGAGTACGTTG CTGCAGGAGAAACAGGAAAGGAGACAATATAACTTGGGGATTTGCTAGGA TCGATAGGTTTAGTATGCAGGAGGAGCACGACATTGTTTGAGGACAATAA ATCAGTTATCAATCTCATTAAGGGATCTGGCGCACACTGCAGGACAAAGC ACATCGGAGTGTGCTGGCACGGAATTCGAGAGTGGATTCGAGAAGGAGCA TTGGCGTTGAAATACGTGCAGACCGGCGACCAGCGTGCTGACATTGTT
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Coding sequence (CDS) from alignment at H-paniculata_contig8247:1900..3297-

>mRNA_H-paniculata_contig8247.16266.1 ID=mRNA_H-paniculata_contig8247.16266.1|Name=mRNA_H-paniculata_contig8247.16266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at H-paniculata_contig8247:1900..3297- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACGTAGATACGGCGTATTTGAATGCCCCGTTAAAAGAAGAGCTGAT
TTTTAGGCTACCCCTCGAGTTTTCTCCTTCCTCTCGAAACATACTCTTTA
TGGACGTAGATACGGCGTATTTGAATGCCCCGTTAAAAGAAGAGCTGATT
TTTAGGCTACCCCTCGAGTTTTCTCCTTCCTCTCGAAACATACTCTTTCA
TAACATAAATCAGTGTTATAGGATGAAAGATTTGGGCTCTCTCTCGCGCG
TGTTGGGAAACGAAGCTCGACGTGACCGCCCTAATGGTATCATAACCACC
TCGCAGTGTAGCTACATCCGCGAGGTACTAAAACGAAGCGATTTTAATGA
GTGTCGGGGGGTACTCAACCCTGTAGAAAGAACAGTGAAGATTTCGGCAC
CCGATTCGGCCGACAAGCCCTCCGAACAGAACATAACATAAATCAGTGTT
ATAGGATGAAAGATTTGGGCTCTCTCTCGCGCGTGTTGGGAAACGAAGCT
CGACGTGACCGCCCTAATGGTATCATAACCACCTCGCAGTGTAGCTACAT
CCGCGAGGTACTAAAACGAAGCGATTTTAATGAGTGTCGGGGGGTACTCA
ACCCTGTAGAAAGAACAGTGAAGATTTCGGCACCCGATTCGGCCGACAAG
CCCTCCGAACAGAATGGCAATTCAACTGGATATAGAGGCATGGTAAGATC
ACTCATGTATGCCTTAACAGGAACTAGACCTGATATAGCATACGCAGTAC
ACCAAACAGCACGTCGTATGAAGAACCCATGTCGAGAAGACTTCAGTACA
TGATGGCAATTCAACTGGATATAGAGGCATGGTAAGATCACTCATGTATG
CCTTAACAGGAACTAGACCTGATATAGCATACGCAGTACACCAAACAGCA
CGTCGTATGAAGAACCCATGTCGAGAAGACTTCAGTACATGA
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