prot_H-paniculata_contig8219.16242.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8219.16242.1
Unique Nameprot_H-paniculata_contig8219.16242.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length108
Homology
BLAST of mRNA_H-paniculata_contig8219.16242.1 vs. uniprot
Match: D7G6A0_ECTSI (Flagellar inner arm dynein light chain Tctex1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6A0_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 4.410e-69
Identity = 99/107 (92.52%), Postives = 102/107 (95.33%), Query Frame = 0
Query:    1 MDFQDDAAEFSVEDVDTIVKNAITGCLTDVMYNPKKELQSLNKPYKYIITSIIMQKNGAGVSTCASMVWDPTKDNLCQVPWENQNMHCIVTVYGCAVHIDNANEMEA 107
            MDFQDDAAEFS EDVDTIVKNAITGCLTDVMYNPKKELQ LNKPYKYIIT IIMQKNGAGV+TCASMVWD TKDN CQVPWENQNMHCIVTVYGCAVHIDNANE+E+
Sbjct:    1 MDFQDDAAEFSSEDVDTIVKNAITGCLTDVMYNPKKELQPLNKPYKYIITCIIMQKNGAGVNTCASMVWDTTKDNFCQVPWENQNMHCIVTVYGCAVHIDNANELES 107          
BLAST of mRNA_H-paniculata_contig8219.16242.1 vs. uniprot
Match: A0A835YRL3_9STRA (Flagellar inner arm dynein light chain Tctex1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRL3_9STRA)

HSP 1 Score: 176 bits (446), Expect = 3.560e-55
Identity = 86/120 (71.67%), Postives = 96/120 (80.00%), Query Frame = 0
Query:    1 MDFQDDAAEFSVEDVDTIVKNAITGCLTDVMYNPKK--------------ELQSLNKPYKYIITSIIMQKNGAGVSTCASMVWDPTKDNLCQVPWENQNMHCIVTVYGCAVHIDNANEME 106
            MDF DDAA++SVEDVDTIVKNAI GCLTDV YN KK              ELQSLNKP+KYIIT IIMQKNGAG++T A+M WDP KDN CQVPWENQNMHCIVTVYGCAV+IDN +E++
Sbjct:    1 MDFADDAAKYSVEDVDTIVKNAIAGCLTDVTYNAKKVTDWTNHIVDNCLRELQSLNKPFKYIITCIIMQKNGAGLNTSATMFWDPEKDNYCQVPWENQNMHCIVTVYGCAVNIDNTHELD 120          
BLAST of mRNA_H-paniculata_contig8219.16242.1 vs. uniprot
Match: A0A6U1NWB1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NWB1_9STRA)

HSP 1 Score: 145 bits (367), Expect = 3.870e-43
Identity = 72/120 (60.00%), Postives = 85/120 (70.83%), Query Frame = 0
Query:    1 MDFQDDAAEFSVEDVDTIVKNAITGCLTDVMYNPKK--------------ELQSLNKPYKYIITSIIMQKNGAGVSTCASMVWDPTKDNLCQVPWENQNMHCIVTVYGCAVHIDNANEME 106
            M+FQDDAAEFS EDV+T  KNAI  CL    Y  KK              ELQS+N+PYKY++T IIMQKNGAG++T ASM WD TKD LC+V WEN  +HCIVTV+G AVHIDN NE++
Sbjct:    1 MEFQDDAAEFSQEDVETTAKNAIRSCLDKHNYQAKKVDDWTNTIVDTCLKELQSMNRPYKYVVTCIIMQKNGAGMNTTASMFWDTTKDGLCKVYWENHTIHCIVTVFGLAVHIDNQNELD 120          
BLAST of mRNA_H-paniculata_contig8219.16242.1 vs. uniprot
Match: A0A482SIW0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIW0_9ARCH)

HSP 1 Score: 119 bits (297), Expect = 3.700e-32
Identity = 59/118 (50.00%), Postives = 76/118 (64.41%), Query Frame = 0
Query:    3 FQDDAAEFSVEDVDTIVKNAITGCLTDVMYNPKK--------------ELQSLNKPYKYIITSIIMQKNGAGVSTCASMVWDPTKDNLCQVPWENQNMHCIVTVYGCAVHIDNANEME 106
            FQDD+AEFS EDV+ IV+ AI   L D  YN KK              +LQ L +P+KYIIT +IMQK GAG++T  SM WD  KD  C+VPW+N  M C VTVYG +V+ID+  +++
Sbjct:   28 FQDDSAEFSTEDVEGIVRLAIQNSLNDASYNSKKVNEWTNNIVTNCLKDLQGLGRPFKYIITCMIMQKTGAGLNTTTSMFWDTAKDGYCKVPWQNNTMTCTVTVYGLSVNIDDPQDVD 145          
BLAST of mRNA_H-paniculata_contig8219.16242.1 vs. uniprot
Match: A0A7S3JST1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JST1_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.260e-31
Identity = 56/115 (48.70%), Postives = 78/115 (67.83%), Query Frame = 0
Query:    6 DAAEFSVEDVDTIVKNAITGCLTDVMYNPKK--------------ELQSLNKPYKYIITSIIMQKNGAGVSTCASMVWDPTKDNLCQVPWENQNMHCIVTVYGCAVHIDNANEME 106
            D   F  ED+++IVKNAIT  L+D +YN KK              ELQSLN+P+KY++T  IMQKNGAG+ T  +++WD +KD L  +PWEN +MH I+TV+G A+++DN  EM+
Sbjct:    2 DDESFPQEDIESIVKNAITSTLSDHLYNSKKVNDWINSIVDACLKELQSLNRPFKYVVTCGIMQKNGAGLDTGVALIWDHSKDGLVCIPWENTSMHVIITVFGLALNVDNLAEMD 116          
BLAST of mRNA_H-paniculata_contig8219.16242.1 vs. uniprot
Match: A0A7S2DAW6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DAW6_9STRA)

HSP 1 Score: 114 bits (286), Expect = 7.670e-31
Identity = 58/111 (52.25%), Postives = 75/111 (67.57%), Query Frame = 0
Query:   10 FSVEDVDTIVKNAITGCLTDVMYNPKK--------------ELQSLNKPYKYIITSIIMQKNGAGVSTCASMVWDPTKDNLCQVPWENQNMHCIVTVYGCAVHIDNANEME 106
            FS EDVD+IVK AIT  L DVMYN KK              EL+ L +P++YI+T IIMQKNGAG++T A+M WD +KD  C V W N  M+ +VTV+G AV+IDN+ E++
Sbjct:    8 FSPEDVDSIVKLAITQNLADVMYNQKKVNDQINKIVDKCLEELRKLERPFRYIVTCIIMQKNGAGMNTAATMFWDTSKDGKCVVQWSNDTMNVVVTVFGLAVNIDNSGELD 118          
BLAST of mRNA_H-paniculata_contig8219.16242.1 vs. uniprot
Match: A0A7R9W941_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W941_9STRA)

HSP 1 Score: 114 bits (286), Expect = 8.370e-31
Identity = 56/118 (47.46%), Postives = 77/118 (65.25%), Query Frame = 0
Query:    3 FQDDAAEFSVEDVDTIVKNAITGCLTDVMYNPKKE--------------LQSLNKPYKYIITSIIMQKNGAGVSTCASMVWDPTKDNLCQVPWENQNMHCIVTVYGCAVHIDNANEME 106
            FQD   EF VEDV+T++KNAI   L+D  Y   K               L+SLN+PYKY IT +I+QKNGAG+ + +S  WD +KD LC+V WEN  MHC+VTV+G +V++D+  E++
Sbjct:    4 FQDLGEEFVVEDVETVIKNAIGVVLSDASYISSKANDWSNSVISAALKGLESLNRPYKYCITVMIVQKNGAGLVSASSTYWDASKDGLCKVTWENSTMHCVVTVFGTSVNVDSPTELD 121          
BLAST of mRNA_H-paniculata_contig8219.16242.1 vs. uniprot
Match: F0YFG3_AURAN (Uncharacterized protein DLC1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFG3_AURAN)

HSP 1 Score: 112 bits (279), Expect = 8.380e-30
Identity = 53/115 (46.09%), Postives = 75/115 (65.22%), Query Frame = 0
Query:    6 DAAEFSVEDVDTIVKNAITGCLTDVMYNPK--------------KELQSLNKPYKYIITSIIMQKNGAGVSTCASMVWDPTKDNLCQVPWENQNMHCIVTVYGCAVHIDNANEME 106
            D  +F  ED++ +VKNAI+ CL++  Y  K              KELQ+LN+P+KYI+T IIMQKNGAG+ T A++ WD  KD L  +PWEN  M  +VTV+G A+++DN  E++
Sbjct:    2 DEDQFPQEDIENLVKNAISACLSEFQYQAKLVNNKIHAIVDACLKELQTLNRPFKYIVTCIIMQKNGAGLDTGAALFWDNAKDGLVCIPWENSQMSVVVTVFGTALNVDNLAELD 116          
BLAST of mRNA_H-paniculata_contig8219.16242.1 vs. uniprot
Match: A0A5D6Y129_9STRA (Uncharacterized protein n=2 Tax=Pythium TaxID=4797 RepID=A0A5D6Y129_9STRA)

HSP 1 Score: 100 bits (248), Expect = 4.520e-25
Identity = 51/104 (49.04%), Postives = 63/104 (60.58%), Query Frame = 0
Query:    8 AEFSVEDVDTIVKNAITGCLTDVMYNPKKEL--------------QSLNKPYKYIITSIIMQKNGAGVSTCASMVWDPTKDNLCQVPWENQNMHCIVTVYGCAV 97
            +EFS EDV  I K AI   L D +YN KK L              Q+LNKP+KY +T +IMQK GAG++T AS  WDPT D  C V WEN  ++C+V VYG A+
Sbjct:    6 SEFSQEDVLPIAKTAIEAALKDAVYNRKKVLDWSNTLVATVLTGLQNLNKPFKYAVTCMIMQKTGAGMATAASCYWDPTLDGYCTVLWENSTIYCMVAVYGAAI 109          
BLAST of mRNA_H-paniculata_contig8219.16242.1 vs. uniprot
Match: A0A0P1ABG3_PLAHL (Dynein light chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ABG3_PLAHL)

HSP 1 Score: 98.6 bits (244), Expect = 1.830e-24
Identity = 52/104 (50.00%), Postives = 63/104 (60.58%), Query Frame = 0
Query:    8 AEFSVEDVDTIVKNAITGCLTDVMYNPKKEL--------------QSLNKPYKYIITSIIMQKNGAGVSTCASMVWDPTKDNLCQVPWENQNMHCIVTVYGCAV 97
            +EFS EDV  I K AI   L D +YN KK L              QSLNKP+KY +T +IMQK GAG++T A+  WD T D  C V WEN  ++CIVTVYG A+
Sbjct:    6 SEFSQEDVLPIAKMAIEAALKDTVYNRKKVLDWSNTLVATVLAGLQSLNKPFKYAVTCLIMQKTGAGMATAAACFWDTTMDGNCTVLWENSTINCIVTVYGVAI 109          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8219.16242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6A0_ECTSI4.410e-6992.52Flagellar inner arm dynein light chain Tctex1 n=2 ... [more]
A0A835YRL3_9STRA3.560e-5571.67Flagellar inner arm dynein light chain Tctex1 n=1 ... [more]
A0A6U1NWB1_9STRA3.870e-4360.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A482SIW0_9ARCH3.700e-3250.00Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3JST1_9STRA1.260e-3148.70Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2DAW6_9STRA7.670e-3152.25Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9W941_9STRA8.370e-3147.46Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
F0YFG3_AURAN8.380e-3046.09Uncharacterized protein DLC1 n=1 Tax=Aureococcus a... [more]
A0A5D6Y129_9STRA4.520e-2549.04Uncharacterized protein n=2 Tax=Pythium TaxID=4797... [more]
A0A0P1ABG3_PLAHL1.830e-2450.00Dynein light chain n=1 Tax=Plasmopara halstedii Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005334Dynein light chain Tctex-1 likePFAMPF03645Tctex-1coord: 9..95
e-value: 4.8E-19
score: 68.5
IPR005334Dynein light chain Tctex-1 likePANTHERPTHR21255T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAINcoord: 10..96
IPR038586Tctex-1-like superfamilyGENE3D3.30.1140.40coord: 12..97
e-value: 1.2E-24
score: 88.1
NoneNo IPR availablePANTHERPTHR21255:SF4DYNEIN LIGHT CHAIN TCTEX-TYPEcoord: 10..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8219contigH-paniculata_contig8219:4807..9959 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8219.16242.1mRNA_H-paniculata_contig8219.16242.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8219 4807..9959 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8219.16242.1 ID=prot_H-paniculata_contig8219.16242.1|Name=mRNA_H-paniculata_contig8219.16242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp
MDFQDDAAEFSVEDVDTIVKNAITGCLTDVMYNPKKELQSLNKPYKYIIT
SIIMQKNGAGVSTCASMVWDPTKDNLCQVPWENQNMHCIVTVYGCAVHID
NANEMEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005334Tctex-1-like
IPR038586Tctex-1-like_sf