prot_H-paniculata_contig8212.16237.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8212.16237.1
Unique Nameprot_H-paniculata_contig8212.16237.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length51
Homology
BLAST of mRNA_H-paniculata_contig8212.16237.1 vs. uniprot
Match: D8LMI5_ECTSI (S4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMI5_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 2.770e-15
Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 0
Query:    1 MLANAGYPVLELRRERYGKIRLGDLAEGDHKPVMGAELAWARSLLE 46
            MLANAGYPVLELRRERYGKI LGDL EG+H PV G  L WARS+L+
Sbjct:  325 MLANAGYPVLELRRERYGKILLGDLPEGEHVPVSGDALEWARSVLQ 370          
BLAST of mRNA_H-paniculata_contig8212.16237.1 vs. uniprot
Match: A0A7S4K2B5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K2B5_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.650e-9
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    1 MLANAGYPVLELRRERYGKIRLGDLAEGDHKPVMGAELAWARSLLEEAQ 49
            ML NAGYPV ELRRER+G++ LGDL  G  + + G E +WA +LLE+ Q
Sbjct:  130 MLFNAGYPVAELRRERHGRVTLGDLDVGRFRELNGEEESWAMNLLEKTQ 178          
BLAST of mRNA_H-paniculata_contig8212.16237.1 vs. uniprot
Match: A0A1Z5JHT9_FISSO (23S rRNA pseudouridine2605 synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHT9_FISSO)

HSP 1 Score: 56.2 bits (134), Expect = 6.780e-8
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 MLANAGYPVLELRRERYGKIRLGDLAEGDHKPVMGAELAWARSLLEEAQS 50
            +LAN G+ V++LRRER G+I+LGDL EG  + +   ELAWA  +L+  QS
Sbjct:  265 ILANCGHEVVDLRRERLGRIQLGDLPEGKVRDLTADELAWAEQVLQGKQS 314          
BLAST of mRNA_H-paniculata_contig8212.16237.1 vs. uniprot
Match: A0A7S2JZM0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JZM0_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.400e-7
Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 MLANAGYPVLELRRERYGKIRLGDLAEGDHKPVMGAELAWARSLLE 46
            MLAN G+PV+ELRRER+G + LGDL EG  + +   EL WA  +++
Sbjct:  209 MLANCGFPVIELRRERHGVVWLGDLEEGAFRDLNPEELEWAEGVID 254          
BLAST of mRNA_H-paniculata_contig8212.16237.1 vs. uniprot
Match: A0A7S2E814_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E814_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.040e-6
Identity = 23/45 (51.11%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    1 MLANAGYPVLELRRERYGKIRLGDLAEGDHKPVMGAELAWARSLL 45
            MLAN GYPV+EL+R R+G++ L DL  G  +     EL W  SLL
Sbjct:  135 MLANCGYPVIELKRIRHGEVTLNDLEVGQFRVATSEELKWIESLL 179          
BLAST of mRNA_H-paniculata_contig8212.16237.1 vs. uniprot
Match: K0QY66_THAOC (PseudoU_synth_2 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QY66_THAOC)

HSP 1 Score: 51.6 bits (122), Expect = 3.020e-6
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    1 MLANAGYPVLELRRERYGKIRLGDLAEGDHKPVMGAELAWARSLL 45
            +LAN GYPV+EL+R R+G+IRL +L  G+ +     E+ WA SLL
Sbjct:  322 ILANCGYPVVELKRLRHGEIRLRELPPGEFRNCSNEEIEWAESLL 366          
BLAST of mRNA_H-paniculata_contig8212.16237.1 vs. uniprot
Match: A0A7S4VQ64_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VQ64_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 4.160e-6
Identity = 23/45 (51.11%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    1 MLANAGYPVLELRRERYGKIRLGDLAEGDHKPVMGAELAWARSLL 45
            MLAN GYPV+EL+R R+G++ L DL  G  +     EL W  SLL
Sbjct:  395 MLANCGYPVIELKRIRHGEVTLNDLEVGQFRVATSEELKWIESLL 439          
BLAST of mRNA_H-paniculata_contig8212.16237.1 vs. uniprot
Match: A0A7S4SX71_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SX71_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 4.160e-6
Identity = 23/45 (51.11%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    1 MLANAGYPVLELRRERYGKIRLGDLAEGDHKPVMGAELAWARSLL 45
            MLAN GYPV+EL+R R+G++ L DL  G  +     EL W  SLL
Sbjct:  408 MLANCGYPVIELKRIRHGEVTLNDLEVGQFRVATSEELKWIESLL 452          
BLAST of mRNA_H-paniculata_contig8212.16237.1 vs. uniprot
Match: A0A835YWQ3_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWQ3_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.830e-5
Identity = 25/45 (55.56%), Postives = 31/45 (68.89%), Query Frame = 0
Query:    1 MLANAGYPVLELRRERYGKIRLGD-LAEGDHKPVMGAELAWARSL 44
            MLANAGYPV+EL R RYG I + + L  G   PV+G+ L WA+ L
Sbjct:  175 MLANAGYPVVELHRTRYGDIVMDENLQPGQCAPVVGSALTWAQWL 219          
BLAST of mRNA_H-paniculata_contig8212.16237.1 vs. uniprot
Match: A0A1E7FAJ1_9STRA (Pseudouridine synthase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAJ1_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 3.330e-5
Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    1 MLANAGYPVLELRRERYGKIRLGDLAEGDHKPVMGAELAWARSLLE 46
            +LAN+GYPV+ L+RER G I L DL  G  + +   E  WARSLL+
Sbjct:  145 ILANSGYPVIGLKRERLGIITLSDLHPGCARDLTPEEEKWARSLLK 190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8212.16237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LMI5_ECTSI2.770e-1578.26S4 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S4K2B5_9STRA1.650e-957.14Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1Z5JHT9_FISSO6.780e-852.0023S rRNA pseudouridine2605 synthase n=2 Tax=Fistul... [more]
A0A7S2JZM0_9STRA1.400e-752.17Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2E814_9STRA2.040e-651.11Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0QY66_THAOC3.020e-651.11PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A7S4VQ64_9STRA4.160e-651.11Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4SX71_9STRA4.160e-651.11Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A835YWQ3_9STRA1.830e-555.56Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A1E7FAJ1_9STRA3.330e-552.17Pseudouridine synthase n=1 Tax=Fragilariopsis cyli... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8212contigH-paniculata_contig8212:10303..10455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8212.16237.1mRNA_H-paniculata_contig8212.16237.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8212 10303..10479 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8212.16237.1 ID=prot_H-paniculata_contig8212.16237.1|Name=mRNA_H-paniculata_contig8212.16237.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=51bp
MLANAGYPVLELRRERYGKIRLGDLAEGDHKPVMGAELAWARSLLEEAQS
*
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