prot_H-paniculata_contig81611.16186.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig81611.16186.1
Unique Nameprot_H-paniculata_contig81611.16186.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length165
Homology
BLAST of mRNA_H-paniculata_contig81611.16186.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.280e-42
Identity = 77/163 (47.24%), Postives = 107/163 (65.64%), Query Frame = 0
Query:    2 VADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQDIFTMVTAKGVYRPTRVPQGVLNATSYFHGTMGDVLAGLLRKVCEVWVDDIGIWAGTWQELMRRLWVVLEWLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERV 164
            V D+RAVN  I  S  PMP+LE   + ++ A+ + +LD+LQGYW MPL P+AQ+IFTM+   G+Y P RVPQGVLNATSY+ GTM  +L  L    C VWVDDI  W  T ++L+  L ++L   +  G++ AAHK   +   ++WCGK+YS   + HD +R+
Sbjct:  715 VGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDLN---CIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRL 874          
BLAST of mRNA_H-paniculata_contig81611.16186.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 3.380e-40
Identity = 76/164 (46.34%), Postives = 102/164 (62.20%), Query Frame = 0
Query:    1 MVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQDIFTMVTAKGVYRPTRVPQGVLNATSYFHGTMGDVLAGLLRKVCEVWVDDIGIWAGTWQELMRRLWVVLEWLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERV 164
            +V+D+RA N  +      MPN E     ++ A  + +LDLLQ YWQ PL P+AQ+IFT+ T  G+Y P RVPQG+LNATSYF  T+  +L GL    C VWVDD+  W     +L+  L ++L+ L+  G+Y AAHK   F   + WCGK+YS   V HDPER+
Sbjct:  812 LVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGLN---CFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERL 972          
BLAST of mRNA_H-paniculata_contig81611.16186.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.050e-36
Identity = 76/162 (46.91%), Postives = 99/162 (61.11%), Query Frame = 0
Query:    4 DYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQDIFTMVTAKGVYRPTRVPQGVLNATSYFHGTMGDVLAGLLRKVCEVWVDDIGIWAGTWQELMRRLWVVLEWLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQ 165
            DY   N       + +P+ E     + GA+ F  LDLLQGYWQMPL   A++IF++ T +G++ PTRVPQ VLNAT YF   M ++L GL    C VWVDD   W     +L+  L  +L  LQ  GI+AAAHK   F  ++RWCGK+YSG  V+ DPER+Q
Sbjct:  468 DYLRANLQCEKVPIVVPSQEVQVSMLQGATCFGKLDLLQGYWQMPLAESAREIFSIATPEGLFEPTRVPQDVLNATGYFQAVMTEILQGLN---CAVWVDDDIWWGIDETDLLNTLDEILWRLQDNGIFAAAHKCPFFDTKIRWCGKVYSGGQVASDPERLQ 626          
BLAST of mRNA_H-paniculata_contig81611.16186.1 vs. uniprot
Match: A0A6A3L091_9STRA (RNA-directed DNA polymerase n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L091_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.250e-35
Identity = 63/164 (38.41%), Postives = 97/164 (59.15%), Query Frame = 0
Query:    1 MVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQDIFTMVTAKGVYRPTRVPQGVLNATSYFHGTMGDVLAGLLRKVCEVWVDDIGIWAGTWQELMRRLWVVLEWLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERV 164
            +  DYR +N++  P A  MPNL      + GA  F   DLL+G+WQ+PL P  Q++F+ +T   VY PTRVPQG  ++  +F   +  +LA LL + C +W+DDI ++A +  E +R      E ++  G+  +  K  LF+ ++ WCGK+ SG  + HDPER+
Sbjct:  419 ITTDYRVINSMTVPIAGTMPNLASAAGAVRGAVAFARFDLLKGFWQLPLHPNCQEMFSFLTEDAVYTPTRVPQGATDSALHFQAQLQRILAPLLHRNCLLWIDDILLFASSMDEFLRVFREFFELIKDHGLKLSVTKCVLFQPQVLWCGKMVSGTDIQHDPERL 582          
BLAST of mRNA_H-paniculata_contig81611.16186.1 vs. uniprot
Match: A0A6G0RPS6_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RPS6_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.680e-35
Identity = 64/165 (38.79%), Postives = 95/165 (57.58%), Query Frame = 0
Query:    1 MVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQDIFTMVTAKGVYRPTRVPQGVLNATSYFHGTMGDVLAGLLRKVCEVWVDDIGIWAGTWQELMRRLWVVLEWLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQ 165
            M  DYR VN L  P A   PNL  + + + GA  F   +LL+G+WQ+PL P +Q++F+ +T  GV+ PTRVPQG  ++  +F   M +    LL     VW+DDI ++A +  E + +L      L+ R +   A K KLF +++ WCGK+  G  + HDP R+Q
Sbjct:    1 MTVDYRPVNQLTVPLAAATPNLAVVTQSVKGAYGFGPFNLLKGFWQLPLSPASQELFSFLTEDGVFTPTRVPQGASDSALHFQAQMQECFRSLLYNAALVWIDDILLFARSPGEFLEKLRAFFIILRQRNLKLNAAKCKLFSKKVIWCGKVIDGTGIEHDPTRLQ 165          
BLAST of mRNA_H-paniculata_contig81611.16186.1 vs. uniprot
Match: A0A6A3GQ28_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GQ28_9STRA)

HSP 1 Score: 137 bits (344), Expect = 5.320e-35
Identity = 67/162 (41.36%), Postives = 96/162 (59.26%), Query Frame = 0
Query:    4 DYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQDIFTMVTAKGVYRPTRVPQGVLNATSYFHGTMGDVLAGLLRKVCEVWVDDIGIWAGTWQELMRRLWVVLEWLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQ 165
            DYR +NN+  P A  MP+LE       G   +   D L+G+WQ+PLD  +Q+  + +T KG++ PTRVPQG  +A  +F  T+  VL  L+ K   VW+DD+ ++A T +EL+  +   L  L   G+     K+ LF  E+RWCG+I S A V HDPER+Q
Sbjct:  330 DYRPLNNVTEPIAGVMPSLEVALEHCKGKMFYAVFDFLKGFWQLPLDKSSQEYMSYMTDKGIFTPTRVPQGSTDAALHFQSTVEMVLGDLVNKSVIVWIDDLLVFADTAEELLEAIEATLTKLDEYGLILNPKKSALFLTEVRWCGRIISKAGVGHDPERIQ 491          
BLAST of mRNA_H-paniculata_contig81611.16186.1 vs. uniprot
Match: A0A6A4E9W8_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4E9W8_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.390e-34
Identity = 67/162 (41.36%), Postives = 96/162 (59.26%), Query Frame = 0
Query:    4 DYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQDIFTMVTAKGVYRPTRVPQGVLNATSYFHGTMGDVLAGLLRKVCEVWVDDIGIWAGTWQELMRRLWVVLEWLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQ 165
            DYR +NN+  P A  MP+LE       G   +   D L+G+WQ+PLD  +Q+  + +T KG++ PTRVPQG  +A  +F  T+  VL  L+ K   VW+DD+ ++A T +EL+  +   L  L   G+     K+ LF  E+RWCG+I S A V HDPER+Q
Sbjct:  571 DYRPLNNVTEPIAGVMPSLEVALEHCKGKMFYAVFDFLKGFWQLPLDKSSQEYMSYMTDKGIFTPTRVPQGNTDAALHFQSTVEMVLGDLVNKSVIVWIDDLLVFADTAEELLEAIEATLTKLDEYGLILNPKKSALFLSEVRWCGRIISKAGVGHDPERIQ 732          
BLAST of mRNA_H-paniculata_contig81611.16186.1 vs. uniprot
Match: A0A6A3KNY9_9STRA (Reverse transcriptase domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3KNY9_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.080e-33
Identity = 64/165 (38.79%), Postives = 95/165 (57.58%), Query Frame = 0
Query:    1 MVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQDIFTMVTAKGVYRPTRVPQGVLNATSYFHGTMGDVLAGLLRKVCEVWVDDIGIWAGTWQELMRRLWVVLEWLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQ 165
            M  DYR VN L  P A   PNL  + + + GA  F   +LL+G+WQ+PL P +Q++F+ +T  GV+ PTRVPQG  ++  +F   M +    LL     VW+DDI ++A +  E + +L      L+ R +   A K KLF +++ WCGK+  G  + HDP R+Q
Sbjct:  364 MTVDYRPVNQLTVPLAAATPNLAVVTQSVKGAYGFGPFNLLKGFWQLPLSPTSQELFSFLTEDGVFTPTRVPQGASDSALHFQAQMQECFRSLLYNAALVWIDDILLFARSPGEFLEKLRAFFIILRQRNLKLNAAKCKLFSKKVIWCGKVIDGTGIEHDPTRLQ 528          
BLAST of mRNA_H-paniculata_contig81611.16186.1 vs. uniprot
Match: A0A6A3GVC4_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3GVC4_9STRA)

HSP 1 Score: 131 bits (330), Expect = 3.180e-33
Identity = 64/165 (38.79%), Postives = 94/165 (56.97%), Query Frame = 0
Query:    1 MVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQDIFTMVTAKGVYRPTRVPQGVLNATSYFHGTMGDVLAGLLRKVCEVWVDDIGIWAGTWQELMRRLWVVLEWLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQ 165
            M  D R+VN    P + PMP L+ +  G+ GA VF  LD  +GYWQ+PL P +Q++++ VT +G+Y PTRVP G  +A +Y  G + ++   L+      W+DDI  +A     L+  L  VL   +  G+   A K + F  E++WCG++ S   V H PERVQ
Sbjct:   70 MTIDTRSVNERTEPMSWPMPVLDVVLGGLEGARVFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGATDAVAYCQGVVDEIFGDLIGDGILAWLDDILGYAENESALLELLDKVLSRCEAYGLKLHAKKCQFFATEVKWCGRVISADGVKHCPERVQ 234          
BLAST of mRNA_H-paniculata_contig81611.16186.1 vs. uniprot
Match: A0A6A3K6I0_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3K6I0_9STRA)

HSP 1 Score: 133 bits (335), Expect = 4.380e-33
Identity = 66/162 (40.74%), Postives = 95/162 (58.64%), Query Frame = 0
Query:    4 DYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQDIFTMVTAKGVYRPTRVPQGVLNATSYFHGTMGDVLAGLLRKVCEVWVDDIGIWAGTWQELMRRLWVVLEWLQVRGIYAAAHKAKLFRREMRWCGKIYSGATVSHDPERVQ 165
            DYR +NN+    A  MP+LE       G   +   D L+G+WQ+PLD  +Q+  + +T KG++ PTRVPQG  +A  +F  T+  VL  L+ K   VW+DD+ ++A T +EL+  +   L  L   G+     K+ LF  E+RWCG+I S A V HDPER+Q
Sbjct:  571 DYRPLNNVTEAIAGVMPSLEVALEHCKGKMFYAVFDFLKGFWQLPLDKSSQEYMSYMTDKGIFTPTRVPQGNTDAALHFQSTVEMVLGDLVNKSVIVWIDDLLVFADTAEELLEAIEATLTKLDEYGLILNPKKSALFLTEVRWCGRIISKAGVGHDPERIQ 732          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig81611.16186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE1.280e-4247.24Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE3.380e-4046.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE1.050e-3646.91CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6A3L091_9STRA1.250e-3538.41RNA-directed DNA polymerase n=6 Tax=Phytophthora T... [more]
A0A6G0RPS6_9STRA3.680e-3538.79Reverse transcriptase domain-containing protein n=... [more]
A0A6A3GQ28_9STRA5.320e-3541.36Reverse transcriptase domain-containing protein (F... [more]
A0A6A4E9W8_9STRA3.390e-3441.36Reverse transcriptase domain-containing protein n=... [more]
A0A6A3KNY9_9STRA3.080e-3338.79Reverse transcriptase domain-containing protein n=... [more]
A0A6A3GVC4_9STRA3.180e-3338.79Reverse transcriptase domain-containing protein n=... [more]
A0A6A3K6I0_9STRA4.380e-3340.74Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 4..149
e-value: 2.5E-10
score: 40.3
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..152
score: 12.135
NoneNo IPR availableGENE3D3.10.10.10coord: 1..70
e-value: 5.2E-27
score: 96.4
NoneNo IPR availableGENE3D3.30.70.270coord: 12..149
e-value: 5.2E-27
score: 96.4
NoneNo IPR availablePANTHERPTHR24559:SF299coord: 1..137
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 1..137
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig81611contigH-paniculata_contig81611:6..500 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig81611.16186.1mRNA_H-paniculata_contig81611.16186.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig81611 6..518 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig81611.16186.1 ID=prot_H-paniculata_contig81611.16186.1|Name=mRNA_H-paniculata_contig81611.16186.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=165bp
MVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLD
PQAQDIFTMVTAKGVYRPTRVPQGVLNATSYFHGTMGDVLAGLLRKVCEV
WVDDIGIWAGTWQELMRRLWVVLEWLQVRGIYAAAHKAKLFRREMRWCGK
IYSGATVSHDPERVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom