prot_H-paniculata_contig81556.16178.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig81556.16178.1
Unique Nameprot_H-paniculata_contig81556.16178.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length102
Homology
BLAST of mRNA_H-paniculata_contig81556.16178.1 vs. uniprot
Match: UPI00193E8182 (secreted RxLR effector protein 161-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193E8182)

HSP 1 Score: 82.8 bits (203), Expect = 4.300e-17
Identity = 41/101 (40.59%), Postives = 73/101 (72.28%), Query Frame = 0
Query:    2 DIAFAVSQAARLMASPSPVHMESVKRILRYLKGASNLKITFSRDSNIELTGFCNASYGAGDPKRARSTSGSMYFLSGGSVHFSSSLQKLTAQSTTKAKLIA 102
            DI++AVS+ AR    P  +H ++VKR+++YLKG  ++ + F ++ + EL G+C++ Y AG+ K  RSTSG ++ + GG + +SSSLQ++TA S+++A+ ++
Sbjct:   39 DISYAVSKLARYSNDPQQLHWKAVKRVMKYLKGTIDVSLYFHKELSDELIGYCDSDY-AGELKERRSTSGYVFLIHGGPIAWSSSLQRITALSSSEAEYMS 138          
BLAST of mRNA_H-paniculata_contig81556.16178.1 vs. uniprot
Match: A0A6D2IS22_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IS22_9BRAS)

HSP 1 Score: 83.6 bits (205), Expect = 1.360e-16
Identity = 43/101 (42.57%), Postives = 69/101 (68.32%), Query Frame = 0
Query:    2 DIAFAVSQAARLMASPSPVHMESVKRILRYLKGASNLKITFSRDSNIELTGFCNASYGAGDPKRARSTSGSMYFLSGGSVHFSSSLQKLTAQSTTKAKLIA 102
            D+A+AV   +R M  P   H  +V+ ILRYLKGA++  +TF++DS +++TG+C++ Y A DP + RS +G ++ + G +V + S LQK  A STT+A+ +A
Sbjct:  564 DLAYAVGMVSRYMGKPGREHWSAVQWILRYLKGAASKCLTFTKDSELKVTGYCDSDY-ATDPDKRRSITGYVFTVGGNTVSWRSCLQKFVALSTTEAEYVA 663          
BLAST of mRNA_H-paniculata_contig81556.16178.1 vs. uniprot
Match: Q9SHR5_ARATH (F28L22.3 protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9SHR5_ARATH)

HSP 1 Score: 83.2 bits (204), Expect = 1.900e-16
Identity = 41/101 (40.59%), Postives = 70/101 (69.31%), Query Frame = 0
Query:    2 DIAFAVSQAARLMASPSPVHMESVKRILRYLKGASNLKITFSRDSNIELTGFCNASYGAGDPKRARSTSGSMYFLSGGSVHFSSSLQKLTAQSTTKAKLIA 102
            D+A+A+   +R M+ P  +H E+VK ++RYLKGA +L + F+++ +  +TG+C+++Y A D  R RS SG ++ + G +V + +SLQ + A STT+A+ IA
Sbjct: 1154 DLAYAICLISRYMSKPGSMHWEAVKWVMRYLKGAQDLNLVFTKEKDFTVTGYCDSNYAA-DLDRRRSISGYVFTIGGNTVSWKASLQPVVAMSTTEAEYIA 1253          
BLAST of mRNA_H-paniculata_contig81556.16178.1 vs. uniprot
Match: A0A8H7TXH5_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7TXH5_9APHY)

HSP 1 Score: 82.8 bits (203), Expect = 2.590e-16
Identity = 49/101 (48.51%), Postives = 69/101 (68.32%), Query Frame = 0
Query:    2 DIAFAVSQAARLMASPSPVHMESVKRILRYLKGASNLKITFSRDSNIELTGFCNASYGAGDPKRARSTSGSMYFLSGGSVHFSSSLQKLTAQSTTKAKLIA 102
            DIAFAVS  AR MA+P+PVH ++ KR+LRYLKG  +L++TF   S+  L G+ +A + A  P R  S SG ++  SGGS+ +SS  Q + A STT+A+ I+
Sbjct: 1030 DIAFAVSTLARFMATPAPVHWDAAKRVLRYLKGTRDLRLTFGTSSHT-LVGYSDADW-ASQPHR-HSISGHVFLYSGGSISWSSRKQPIIALSTTEAEYIS 1127          
BLAST of mRNA_H-paniculata_contig81556.16178.1 vs. uniprot
Match: A0A151QMF9_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QMF9_CAJCA)

HSP 1 Score: 82.0 bits (201), Expect = 4.590e-16
Identity = 47/100 (47.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:    2 DIAFAVSQAARLMASPSPVHMESVKRILRYLKGASNLKITFSRDSNIELTGFCNASYGAGDPKRARSTSGSMYFLSGGSVHFSSSLQKLTAQSTTKAKLI 101
            DI F+V   AR    P  VH+++VKRILRYLKG +NL I F R  N  L GFC+A+Y AGD    +STSG  +FL    V ++S  Q   A ST +A+ +
Sbjct:  392 DIMFSVCVCARFQVRPKKVHLQAVKRILRYLKGTANLGINFYRSQNFSLLGFCDANY-AGDKWERKSTSGGCHFLGRCLVSWTSKRQSTIALSTCEAEYV 490          
BLAST of mRNA_H-paniculata_contig81556.16178.1 vs. uniprot
Match: UPI001AD8A9B0 (secreted RxLR effector protein 161-like n=1 Tax=Rosa chinensis TaxID=74649 RepID=UPI001AD8A9B0)

HSP 1 Score: 79.3 bits (194), Expect = 4.760e-16
Identity = 43/101 (42.57%), Postives = 67/101 (66.34%), Query Frame = 0
Query:    2 DIAFAVSQAARLMASPSPVHMESVKRILRYLKGASNLKITFSRDSNIELTGFCNASYGAGDPKRARSTSGSMYFLSGGSVHFSSSLQKLTAQSTTKAKLIA 102
            D+ + +S  +R M SP+ +HM++VKR+L+YLKG  +L I + R+ N +L  + ++ Y AGD    RSTSG ++ LS G+V +SS  Q +   STT+A+ IA
Sbjct:    9 DLMYVISLISRFMGSPTELHMQAVKRVLKYLKGTVDLGILYKRNGNEQLEAYTDSDY-AGDLDDQRSTSGYVFLLSTGAVSWSSKKQPVVTLSTTEAEFIA 108          
BLAST of mRNA_H-paniculata_contig81556.16178.1 vs. uniprot
Match: A0A151UDF9_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151UDF9_CAJCA)

HSP 1 Score: 79.7 bits (195), Expect = 6.740e-16
Identity = 42/101 (41.58%), Postives = 64/101 (63.37%), Query Frame = 0
Query:    2 DIAFAVSQAARLMASPSPVHMESVKRILRYLKGASNLKITFSRDSNIELTGFCNASYGAGDPKRARSTSGSMYFLSGGSVHFSSSLQKLTAQSTTKAKLIA 102
            DI F+VS  +R M +P   H  + KRILRYL+G ++L I + R    +LT +C++ Y AGD    +STSG ++ LS G++ +SS  Q +   STT+A+ +A
Sbjct:   47 DIMFSVSVVSRFMENPKETHYVAAKRILRYLRGTTDLGIHYKRQGKTDLTSYCDSDY-AGDQDDRKSTSGYVFLLSSGAISWSSRKQPIVTLSTTEAEFVA 146          
BLAST of mRNA_H-paniculata_contig81556.16178.1 vs. uniprot
Match: A0A151SRJ0_CAJCA (Copia protein n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SRJ0_CAJCA)

HSP 1 Score: 78.2 bits (191), Expect = 7.710e-16
Identity = 46/101 (45.54%), Postives = 61/101 (60.40%), Query Frame = 0
Query:    2 DIAFAVSQAARLMASPSPVHMESVKRILRYLKGASNLKITFSRDSNIELTGFCNASYGAGDPKRARSTSGSMYFLSGGSVHFSSSLQKLTAQSTTKAKLIA 102
            DI F+V   AR    P+ VH+++VKRILRYLKG +NL I F R     L G+C+A Y AGD    +STSG  +FL    V ++S  Q   A ST +A+ +A
Sbjct:   14 DIMFSVYVYARFQVRPNEVHLQAVKRILRYLKGIANLGINFYRSQKFSLLGYCDADY-AGDKWERKSTSGGCHFLGCCLVSWTSKRQNTIALSTCEAEYVA 113          
BLAST of mRNA_H-paniculata_contig81556.16178.1 vs. uniprot
Match: A0A1J3FNQ0_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3FNQ0_NOCCA)

HSP 1 Score: 78.6 bits (192), Expect = 8.730e-16
Identity = 42/101 (41.58%), Postives = 67/101 (66.34%), Query Frame = 0
Query:    2 DIAFAVSQAARLMASPSPVHMESVKRILRYLKGASNLKITFSRDSNIELTGFCNASYGAGDPKRARSTSGSMYFLSGGSVHFSSSLQKLTAQSTTKAKLIA 102
            D+A+AV   +R M  P   H  +V+ I+RYLKGAS   +TF+++  +++TG+C++ Y A D  R RS +G ++ + G +V + S LQK+ A STT+A+ IA
Sbjct:   10 DLAYAVGMVSRYMGKPGKEHWSAVQWIMRYLKGASGKCLTFTKEPELKVTGYCDSDY-ATDLDRRRSITGFVFTVGGNTVSWRSCLQKVVALSTTEAEYIA 109          
BLAST of mRNA_H-paniculata_contig81556.16178.1 vs. uniprot
Match: UPI0006A6E700 (retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A6E700)

HSP 1 Score: 79.0 bits (193), Expect = 1.280e-15
Identity = 40/100 (40.00%), Postives = 67/100 (67.00%), Query Frame = 0
Query:    2 DIAFAVSQAARLMASPSPVHMESVKRILRYLKGASNLKITFSRDSNIELTGFCNASYGAGDPKRARSTSGSMYFLSGGSVHFSSSLQKLTAQSTTKAKLI 101
            D+A+A+    R ++SP  +H ++VKRILRYL+G + +K+ ++ +    + G+C+A YGAG  KR +S +G ++ + G  V + S+LQK  A STT+A+ I
Sbjct:   54 DLAYAIGMVYRFISSPIKIHWQAVKRILRYLRGTTKVKLAYTNEGKFIVRGYCDADYGAGLDKR-KSVTGMVFTVGGNVVSWRSNLQKSIALSTTEAEWI 152          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig81556.16178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00193E81824.300e-1740.59secreted RxLR effector protein 161-like n=1 Tax=So... [more]
A0A6D2IS22_9BRAS1.360e-1642.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q9SHR5_ARATH1.900e-1640.59F28L22.3 protein n=1 Tax=Arabidopsis thaliana TaxI... [more]
A0A8H7TXH5_9APHY2.590e-1648.51Integrase catalytic domain-containing protein n=1 ... [more]
A0A151QMF9_CAJCA4.590e-1647.00Retrovirus-related Pol polyprotein from transposon... [more]
UPI001AD8A9B04.760e-1642.57secreted RxLR effector protein 161-like n=1 Tax=Ro... [more]
A0A151UDF9_CAJCA6.740e-1641.58Retrovirus-related Pol polyprotein from transposon... [more]
A0A151SRJ0_CAJCA7.710e-1645.54Copia protein n=1 Tax=Cajanus cajan TaxID=3821 Rep... [more]
A0A1J3FNQ0_NOCCA8.730e-1641.58Retrovirus-related Pol polyprotein from transposon... [more]
UPI0006A6E7001.280e-1540.00retrovirus-related Pol polyprotein from transposon... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..102
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 2..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..102
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig81556contigH-paniculata_contig81556:208..513 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig81556.16178.1mRNA_H-paniculata_contig81556.16178.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig81556 208..519 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig81556.16178.1 ID=prot_H-paniculata_contig81556.16178.1|Name=mRNA_H-paniculata_contig81556.16178.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
MDIAFAVSQAARLMASPSPVHMESVKRILRYLKGASNLKITFSRDSNIEL
TGFCNASYGAGDPKRARSTSGSMYFLSGGSVHFSSSLQKLTAQSTTKAKL
IA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like