prot_H-paniculata_contig8147.16172.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8147.16172.1
Unique Nameprot_H-paniculata_contig8147.16172.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length107
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8147.16172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..106
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..54
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 81..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8147contigH-paniculata_contig8147:1773..2093 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8147.16172.1mRNA_H-paniculata_contig8147.16172.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8147 1715..2294 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8147.16172.1 ID=prot_H-paniculata_contig8147.16172.1|Name=mRNA_H-paniculata_contig8147.16172.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp
MSNPLHSNARSFPSSIRLLEKEGNSIFSSRSFGSTRHNSGTGAVIDREIH
LYCHFWYFFQCTTIIIAIAAIGRSGLILMIIVPSASGLLIADAAAVVVVA
TVLVCA*
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