prot_H-paniculata_contig81430.16167.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig81430.16167.1
Unique Name	prot_H-paniculata_contig81430.16167.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	89

Homology

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BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.250e-40
Identity = 62/89 (69.66%), Postives = 70/89 (78.65%), Query Frame = 0

Query:    1 LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 89
            L  +++L WW   G+  FP LAPVAQQVFGNQA AAQ+ERDFSGC NLL  NRSRMDTYWVEMVMFL ANF+HIP +  IPM+A KDI 
Sbjct:   25 LDTREILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIH 113

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BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 2.320e-36
Identity = 63/89 (70.79%), Postives = 70/89 (78.65%), Query Frame = 0

Query:    1 LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 89
            L  ++VL WW   GKN FP LAPVAQQVFGNQA+ +Q+ERDFSG G LL PNRSRMDTYWVE+VMFL ANF HIP    IPMVA K+IR
Sbjct:  187 LDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIR 275

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BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 4.140e-36
Identity = 59/89 (66.29%), Postives = 67/89 (75.28%), Query Frame = 0

Query:    1 LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 89
            L  ++VL WW   G+  FP LAPVAQQV GNQA AAQ+ERDFS C NLL  NRSR+DTYWVEMVMFL  N+  IPA+  IPM+A KDIR
Sbjct:  100 LDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIR 188

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BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 9.390e-34
Identity = 59/89 (66.29%), Postives = 67/89 (75.28%), Query Frame = 0

Query:    1 LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 89
            L  ++VL WW   G+  FP LAPVAQQV GNQA AAQ+ERDFS C NLL  NRSR+DTYWVEMVMFL  N+  IPA+  IPM+A KDIR
Sbjct:  498 LDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIR 586

[Close]

BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 3.260e-32
Identity = 58/89 (65.17%), Postives = 67/89 (75.28%), Query Frame = 0

Query:    1 LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 89
            LHP +VL +WAT G++ FPAL  VAQQ FG+Q SAA +ERDFSGCG  L PNRSR++ YWVEMVMFL ANF  IP Y  IP +  KDIR
Sbjct:  727 LHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIR 815

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BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 5.310e-31
Identity = 53/72 (73.61%), Postives = 58/72 (80.56%), Query Frame = 0

Query:   18 FPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 89
            FP LAPVAQQV GNQA AAQ+ERDFS C NLL  NRSR+DTYWVEMVMFL  N+  IPA+  IPM+A KDIR
Sbjct:    2 FPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIR 73

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BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 7.010e-28
Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 0

Query:    5 DVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 89
            +VL +W   GK+ FP+L  VAQQ FGNQASAA +ERDFSGCG  + PNRSR+D YWVEMVMFLKANF+       IP + PKDIR
Sbjct:  389 EVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRIN-IPQIDPKDIR 472

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BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 3.480e-26
Identity = 53/89 (59.55%), Postives = 61/89 (68.54%), Query Frame = 0

Query:    1 LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 89
            L P DVL +W   GK  FP+L  VAQQ FG+QASAAQIERDFS CG     NRSR + YW+EMVM LK N++ IP Y  IP +  KDIR
Sbjct:  487 LPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIR 575

[Close]

BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 4.680e-26
Identity = 54/89 (60.67%), Postives = 63/89 (70.79%), Query Frame = 0

Query:    1 LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 89
            L P+DVL +W   G++ FPAL  VAQQ FG+QA AAQIERDFS  G L   NR+R+D YWVEMV+FLKANF  IP Y  IP +  K IR
Sbjct:  382 LQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIR 470

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BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5KBM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM2_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 7.370e-24
Identity = 48/73 (65.75%), Postives = 55/73 (75.34%), Query Frame = 0

Query:   17 QFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 89
            +F AL   A +V GNQA AAQ+ERDFS C NLL  NRSR+DTYWVEMVMFL  N+  IPA+  IPM+A KDIR
Sbjct:  217 RFQALYMTAGEVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKCIPAFKDIPMIAAKDIR 289

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KSA7_9PHAE	2.250e-40	69.66	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JZQ5_9PHAE	2.320e-36	70.79	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JVT2_9PHAE	4.140e-36	66.29	Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ec...	[more]
A0A6H5KZ46_9PHAE	9.390e-34	66.29	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JJJ9_9PHAE	3.260e-32	65.17	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KP16_9PHAE	5.310e-31	73.61	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5K8W6_9PHAE	7.010e-28	63.53	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JB08_9PHAE	3.480e-26	59.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KFQ8_9PHAE	4.680e-26	60.67	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KBM2_9PHAE	7.370e-24	65.75	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 5..70 e-value: 6.0E-11 score: 42.0
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 5..73

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig81430	contig	H-paniculata_contig81430:165..431 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig81430.16167.1	mRNA_H-paniculata_contig81430.16167.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig81430 165..431 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig81430.16167.1 ID=prot_H-paniculata_contig81430.16167.1|Name=mRNA_H-paniculata_contig81430.16167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLP
PNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf