mRNA_H-paniculata_contig81430.16167.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5KGJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ7_9PHAE) HSP 1 Score: 145 bits (367), Expect = 5.430e-44 Identity = 67/81 (82.72%), Postives = 69/81 (85.19%), Query Frame = -2
Query: 3 MGMAPYAGM*SKFAFRNITISTQYVSMRLRFGGRRLPHPLKSRSICAAEAWFPNTCWATGARAGNWFLPLVAHQPSTSFGC 245
MGM PYAGM SKFA NITIS YVS+RLRF R+P PLKSRSICAAEAWFPNTCWATGAR GNWFLPLVAHQPSTS GC
Sbjct: 1 MGMTPYAGMLSKFALGNITISNPYVSVRLRFEVMRVPQPLKSRSICAAEAWFPNTCWATGARVGNWFLPLVAHQPSTSLGC 81
BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE) HSP 1 Score: 139 bits (349), Expect = 2.250e-40 Identity = 62/89 (69.66%), Postives = 70/89 (78.65%), Query Frame = 1
Query: 1 LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 267
L +++L WW G+ FP LAPVAQQVFGNQA AAQ+ERDFSGC NLL NRSRMDTYWVEMVMFL ANF+HIP + IPM+A KDI
Sbjct: 25 LDTREILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIH 113
BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 133 bits (335), Expect = 2.320e-36 Identity = 63/89 (70.79%), Postives = 70/89 (78.65%), Query Frame = 1
Query: 1 LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 267
L ++VL WW GKN FP LAPVAQQVFGNQA+ +Q+ERDFSG G LL PNRSRMDTYWVE+VMFL ANF HIP IPMVA K+IR
Sbjct: 187 LDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIR 275
BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE) HSP 1 Score: 130 bits (327), Expect = 4.140e-36 Identity = 59/89 (66.29%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 267
L ++VL WW G+ FP LAPVAQQV GNQA AAQ+ERDFS C NLL NRSR+DTYWVEMVMFL N+ IPA+ IPM+A KDIR
Sbjct: 100 LDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIR 188
BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 131 bits (329), Expect = 9.390e-34 Identity = 59/89 (66.29%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 267
L ++VL WW G+ FP LAPVAQQV GNQA AAQ+ERDFS C NLL NRSR+DTYWVEMVMFL N+ IPA+ IPM+A KDIR
Sbjct: 498 LDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIR 586
BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 127 bits (319), Expect = 3.260e-32 Identity = 58/89 (65.17%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 267
LHP +VL +WAT G++ FPAL VAQQ FG+Q SAA +ERDFSGCG L PNRSR++ YWVEMVMFL ANF IP Y IP + KDIR
Sbjct: 727 LHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIR 815
BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE) HSP 1 Score: 114 bits (284), Expect = 5.310e-31 Identity = 53/72 (73.61%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 52 FPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 267
FP LAPVAQQV GNQA AAQ+ERDFS C NLL NRSR+DTYWVEMVMFL N+ IPA+ IPM+A KDIR
Sbjct: 2 FPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIR 73
BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 114 bits (285), Expect = 7.010e-28 Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 1
Query: 13 DVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 267
+VL +W GK+ FP+L VAQQ FGNQASAA +ERDFSGCG + PNRSR+D YWVEMVMFLKANF+ IP + PKDIR
Sbjct: 389 EVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRIN-IPQIDPKDIR 472
BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 110 bits (274), Expect = 3.480e-26 Identity = 53/89 (59.55%), Postives = 61/89 (68.54%), Query Frame = 1
Query: 1 LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 267
L P DVL +W GK FP+L VAQQ FG+QASAAQIERDFS CG NRSR + YW+EMVM LK N++ IP Y IP + KDIR
Sbjct: 487 LPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIR 575
BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 109 bits (272), Expect = 4.680e-26 Identity = 54/89 (60.67%), Postives = 63/89 (70.79%), Query Frame = 1
Query: 1 LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPPNRSRMDTYWVEMVMFLKANFDHIPAYGAIPMVAPKDIR 267
L P+DVL +W G++ FPAL VAQQ FG+QA AAQIERDFS G L NR+R+D YWVEMV+FLKANF IP Y IP + K IR
Sbjct: 382 LQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIR 470 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig81430.16167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig81430.16167.1 >prot_H-paniculata_contig81430.16167.1 ID=prot_H-paniculata_contig81430.16167.1|Name=mRNA_H-paniculata_contig81430.16167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp LHPKDVLGWWATKGKNQFPALAPVAQQVFGNQASAAQIERDFSGCGNLLPback to top mRNA from alignment at H-paniculata_contig81430:165..431- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig81430.16167.1 ID=mRNA_H-paniculata_contig81430.16167.1|Name=mRNA_H-paniculata_contig81430.16167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=267bp|location=Sequence derived from alignment at H-paniculata_contig81430:165..431- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig81430:165..431- >mRNA_H-paniculata_contig81430.16167.1 ID=mRNA_H-paniculata_contig81430.16167.1|Name=mRNA_H-paniculata_contig81430.16167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=534bp|location=Sequence derived from alignment at H-paniculata_contig81430:165..431- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |