prot_H-paniculata_contig8141.16164.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8141.16164.1
Unique Nameprot_H-paniculata_contig8141.16164.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length114
Homology
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BLAST of mRNA_H-paniculata_contig8141.16164.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 3.980e-10
Identity = 34/72 (47.22%), Postives = 42/72 (58.33%), Query Frame = 0 
Query:   49 DEVEVDITIGSKSFAPH-------TFNGKMPWLVEEKVVVQQDGASPHTGKGTPRKLKLAGREDGWNLKLVT 113
            +E E D TI ++ +              KMPWL  ++VVVQQDGASPHTGKG P  L  AG   GW ++LVT
Sbjct:  258 EEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVT 329
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8141.16164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JIM0_9PHAE3.980e-1047.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8141contigH-paniculata_contig8141:10179..10520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8141.16164.1mRNA_H-paniculata_contig8141.16164.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8141 10179..10612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8141.16164.1 ID=prot_H-paniculata_contig8141.16164.1|Name=mRNA_H-paniculata_contig8141.16164.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
EPNRPKSVENHGFPFFRELFFHLYVEFPTSNGANEVSRSYQAARRERSDE
VEVDITIGSKSFAPHTFNGKMPWLVEEKVVVQQDGASPHTGKGTPRKLKL
AGREDGWNLKLVT*
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