prot_H-paniculata_contig8111.16133.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8111.16133.1
Unique Nameprot_H-paniculata_contig8111.16133.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length364
Homology
BLAST of mRNA_H-paniculata_contig8111.16133.1 vs. uniprot
Match: D7FUT3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUT3_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 1.510e-81
Identity = 171/382 (44.76%), Postives = 221/382 (57.85%), Query Frame = 0
Query:   23 DGEACLNLAEELFVSCRFTEAVKVCNNALTGYYSSCDRT------------RPPASSAAHAGNASDALVSFEDLLIAPIGACDTSDLLVAVLLQCGFELGRLEEWGRCRTFYEVRGAMPFAIAMLWLRLRLAGGEVDLVRRVLWPLRAELSKTQQRFSVAREDRSEGKRELDQHHN--INTARTNYAEVMGTLIVQIMLPSGESADALSLVTSDPHLELKQKSLLMETCAASAATRSRELKPRDGSGPIDGRYSSESNRGDVGGQPGA----------QELAASHEREGPA-----------------EQTMRPVGSAGSLFSGFSELTPEARIVFLFAAGAAGLATYAACRRRQSLWRAVRNAAGLARRTAGDLGTFIVGS 363
            D EA L+LAEELFVSCRFTEA +VC+ A+ G  SSC  +                SS +H    S  +V+F+D +IAP+G C TSDL+VAVLLQCGFEL R EEWGRCR FY    A+PFA+A+LWLRLRLAGGE++LVRR+LW LRAEL +  +R + A    +    + ++ H+  +  A  NY+E    L+VQIM+P GE  +A +LV+SD +L  K KS L++ C  SA+ R RE     G G      ++ S      G+ G           +E     +R+G                   +Q  +        FS  S+ TPEAR+  +  AGAAGLA YAA R R SLWRA RNAAG+A RTAGD+G FIVGS
Sbjct:   21 DQEAKLDLAEELFVSCRFTEAARVCS-AVLGEGSSCTSSPRRNFSSTSTXXXXXTSSGSHDPAGSALVVAFDDQVIAPVGECGTSDLIVAVLLQCGFELQRTEEWGRCRAFYGTTRAIPFAVAILWLRLRLAGGELELVRRILWQLRAELGEEVRRCTPAV---TANNSDFERAHSGAVTPAVANYSEATEMLVVQIMVPCGEFTEAEALVSSDAYLSPKDKSQLLKACEQSASERERESGAATGEGSTGNASNTASGSRSPCGRGGPSHSSYREDYREETKGGPQRDGRTRLEHSSSPDELGAAFCHQQRQQQQSPLQKFFSDVSDWTPEARVQLVVGAGAAGLAAYAALRNRDSLWRAARNAAGVAARTAGDVGAFIVGS 398          
BLAST of mRNA_H-paniculata_contig8111.16133.1 vs. uniprot
Match: A0A6H5K3P0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P0_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 3.130e-71
Identity = 159/378 (42.06%), Postives = 207/378 (54.76%), Query Frame = 0
Query:   23 DGEACLNLAEELFVSCRFTEAVKVCNNALT----------GYYSSCDRTRPPASSAAHAGNASDALVSFEDLLIAPIGACDTSDLLVAVLLQCGFELGRLEEWGRCRTFYEVRGAMPFAIAMLWLRLRLAGGEVDLVRRVLWPLRAELSKTQQRFSVAREDRSEGKRELDQHHNINTARTNYAEVMGTLIVQIMLPSGESADALSLVTSDPHLELKQKSLLMETCAASAATRSREL--------------------KPRDGSGPIDGRYSSESNRGDVGGQPGAQ----ELAASHEREGPA---EQTMRPVGSAGSLFSGFSELTPEARIVFLFAAGAAGLATYAACRRRQSLWRAVRNAAGLARRTAGDLGTFIVGS 363
            D EA L+LAEELFVSCRFTEA  +C+ AL+           + S+           +H    S  +V+  D +IAP+G C TSDL+VAVLLQCGFEL R EEW RCR FY    A+PFA+A+LWLRLRLAGGE++LVR+ L  LRA L +  +R +      +   +  D    +  A  NY+E    L+VQI++P GE  +A++LV+SD +L  K KS L++ C  SA+ R RE                      P    GP+   Y  +      GG    +    E  +S +  G A   +Q  +        FS  S+ TPEAR+     AGAAGLA YAA R R SLWRA R+ AG+A RTAGD+G FIVGS
Sbjct:   21 DQEAKLDLAEELFVSCRFTEAATICSTALSEDSSYTSPNSNFSSTXXXXXXXXXXGSHDSAGSALVVAIGDHVIAPVGECGTSDLIVAVLLQCGFELQRTEEWARCRAFYGTTRAVPFAVAILWLRLRLAGGELELVRKNLSQLRAVLGEEVRRCTPTVTANNSDFQRADSRA-VTQALANYSEATEMLVVQILVPCGEFTEAVALVSSDDYLSPKDKSQLLKACEQSASERERESGALAGEGATGNASNTPARSRSPCGRGGPLHSSYRGDCREETAGGPQRDRRTRLENLSSPDALGAAFCRQQRQQQQSPLQKFFSDVSDWTPEARVQLAVRAGAAGLAAYAALRNRDSLWRAARSVAGVAARTAGDVGAFIVGS 397          
BLAST of mRNA_H-paniculata_contig8111.16133.1 vs. uniprot
Match: A0A835YP76_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP76_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 7.980e-19
Identity = 74/225 (32.89%), Postives = 110/225 (48.89%), Query Frame = 0
Query:   26 ACLNLAEELFVSCRFTEAVKVCNNALTG-YYSSCDRTRPPASSAAHAGNASDALVSFEDLLIAPIGACDTSDLLVAVLLQCGFELGRLEEWGRCRTFYEVRGA---MPFAIAMLWLRLRLAGGEVDLVRRVLWPLRAELSKTQQRFSVAREDRSEGKRELDQHHNINTARTNYAEVMGTLIVQIMLPSGESADA---LSLVTSDPHLELKQKSLLMETCAASAAT 243
            A L+ AE   VSCRF EA  +C   L    +   + T  P SS++ + +  D  V+  DL           D L+AVLLQCGFELGR  E+  C ++Y+ R     +P AIA+LWL+LRL  GE++  R+ L  +R  L          R+D S                 +YA++   L+  ++LP+G+ A A   LS  T   H+E +  + ++    A+A T
Sbjct:    1 AVLDAAEAALVSCRFAEASSLCREHLEATLHPDGNGTSTPVSSSSTSLHLGDLSVAVADL--------QECDQLIAVLLQCGFELGRKNEYRFCHSYYKSRALKHPIPLAIALLWLKLRLEEGELEFTRQALQDMRTAL----------RDDPS--------------GTHSYAQISEMLVADVLLPAGDFAAAKHVLSESTVSAHMEPELLTAMLHAAYAAADT 193          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8111.16133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FUT3_ECTSI1.510e-8144.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3P0_9PHAE3.130e-7142.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YP76_9STRA7.980e-1932.89Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..314
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 315..332
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 333..363

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8111contigH-paniculata_contig8111:6688..9107 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8111.16133.1mRNA_H-paniculata_contig8111.16133.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8111 6609..9133 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8111.16133.1 ID=prot_H-paniculata_contig8111.16133.1|Name=mRNA_H-paniculata_contig8111.16133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=364bp
MTVEGGKDVVGTSLLDDGGKADDGEACLNLAEELFVSCRFTEAVKVCNNA
LTGYYSSCDRTRPPASSAAHAGNASDALVSFEDLLIAPIGACDTSDLLVA
VLLQCGFELGRLEEWGRCRTFYEVRGAMPFAIAMLWLRLRLAGGEVDLVR
RVLWPLRAELSKTQQRFSVAREDRSEGKRELDQHHNINTARTNYAEVMGT
LIVQIMLPSGESADALSLVTSDPHLELKQKSLLMETCAASAATRSRELKP
RDGSGPIDGRYSSESNRGDVGGQPGAQELAASHEREGPAEQTMRPVGSAG
SLFSGFSELTPEARIVFLFAAGAAGLATYAACRRRQSLWRAVRNAAGLAR
RTAGDLGTFIVGS*
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