prot_H-paniculata_contig8108.16128.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8108.16128.1
Unique Nameprot_H-paniculata_contig8108.16128.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length244
Homology
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 6.590e-32
Identity = 96/273 (35.16%), Postives = 141/273 (51.65%), Query Frame = 0
Query:    1 VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPVPVVQVG----------PKHGALG---------WLDNNGDESRVEDLDVPHERMKGLVEDWVKSQEAARRKVLQRVRRYTPKLFGTS---------TGPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIADIVDIGEDPVQEGENM-VLVEWMGLDAAEERSWEAVSTIHENVP 244
            V+VSDT  HF NH+ + L  ALG + +FSVANS WSNGT E M REV+ TLKA++ E     R+W+  VP     +           P H   G            + G E +V+ LD    R+K  V+  V++Q    ++VL +V+    K   ++          G   +V     HVY V+ IV+G  +DVH  R+R +AD +L +  ++  +F+ A  QGEFE+A IVD+     ++G    V VEW+G D  EE +WE +S + +  P
Sbjct: 1433 VWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWKVDVLDEKSLRLK--VQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFVVGDYVIVAAERLHVYGVQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMS--VAEDGPGFDVEVEWVGFDK-EENTWEELSKMWDAAP 1700          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A2P4XSG7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSG7_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 4.840e-20
Identity = 77/266 (28.95%), Postives = 120/266 (45.11%), Query Frame = 0
Query:    2 YVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPVPVVQVGPKHGALGWLDNNGDESRVEDLDVPHERMKGLVEDWVKS---QEAARRKVLQRVRRYTPKLFGTST--------------------GPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIADIVDIGEDPVQEGENMVLVEWMGLDAAEERSWEAVSTIHENVP 244
            +VSD G HF N +   L +ALGA HHF+ A   W+NGTVE +NREV+   +A+L+E      EW   + +  VQ+   H     +D     + +  L   +      V D ++     E  RRK     +  T   F                        GP++V    S  ++++E ++TG  ++VHA R++ +AD SL V  D   +     H  E  + D +       QE  + + V W GL  AE+ SWE  + + ++VP
Sbjct:  189 WVSDQGTHFKNKVIEGLQHALGAHHHFTTARCPWANGTVEVVNREVLRCCRALLSEWRLQSGEWPRVIKI--VQMVLNHSPCSAIDGVAPVTAMTGLKAMNPTDPLAVPDPIQVATLDEIQRRKHHNGKKGTTMAQFDVGDFVLYADVWQHARAKLRVKWCGPAQVTAATSNWIFEIENLITGERREVHASRLKFYADSSLEVTED---LLRHVAHNSEGHVVDSLLAARYNAQEKRHELKVHWRGLAEAED-SWEPAAVLLQDVP 448          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A2P4WXA7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXA7_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 3.640e-17
Identity = 73/261 (27.97%), Postives = 115/261 (44.06%), Query Frame = 0
Query:    1 VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPVPVVQVGPKHGALGWLDNNGDESRVEDLDVPHERMKGLVEDWVKSQEAARRKVLQRVRRYTPKLFGTST------------------GPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIADIVDIGEDPVQEGENMVLVEWMGLDAAEERSWEAVSTIHENV 243
            ++VSD G HF N +   L  ALGA HHF+ A   W+NGTVE + REV+   +A+L+E      EW   + +  VQ+         L+       +  +   +     +      ++  AR K  +R  +      G                     GP+RVV   S  V+ +E ++T  T++VHA R++ FAD  LG+  D+ A      H  E  + + +          ++ +LV+W GL   E  SWE V  + E+V
Sbjct: 1198 LWVSDQGTHFKNAVIQALQRALGAHHHFTTARCPWANGTVEVVMREVLRCCRALLSEWRLAEAEWPRVIKI--VQLVLNQSPSASLEGVAPVRAMTGIAAMNPVDPIITPSGQSARNKARTKSSKRGAKMAQFAIGDYVLYADVWSHRHSKLRVKWCGPARVVDTASNWVFTIENLLTRETREVHASRLKFFADSDLGITEDLLA---HVAHNSEGHVVEEIREARYDNVGKQHQLLVKWRGLGEIE-NSWEPVQNLLEDV 1452          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A225VA87_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VA87_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.860e-16
Identity = 80/263 (30.42%), Postives = 128/263 (48.67%), Query Frame = 0
Query:    3 VSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEA------------------NRPVREWLAAVPVPVVQVGPKHGALGWLDNNGD--ESRVEDLDVPHERMKGLVEDWVKSQEAARRKVLQRVRRYTPKLFGTSTGPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIAD-IVDIGEDPVQEGENMVLVEWMGLDAAEERSWEAVSTIHENVP 244
            +SD G HF N + + LA  L  E  FS   S W NGTVE +NR+V+  L+A+L +A                  + PVR      PV V    P   AL  ++ + +  +S+ +   +  +  KG + ++         ++ QR+  +  KL G   GP +V+   S H +K+E +VTG   DVH  R++ +AD +L    +   + E    QG     D  ++   +P + G   +LV W+GL A E+ SWE +ST+ ++VP
Sbjct:  362 MSDQGSHFRNEMINHLAARLKIEPKFSPVYSPWLNGTVERLNRDVLQVLRALLLDALDSHEWPYLLPAIQANLNHTPVRSLAGHSPVEVFTGLPASSALDVVEMHREVVDSKEKKRLLDMQAHKGALVNFDVGDFVLWSRIDQRLPNH--KLLGQWVGPFKVIEALS-HSFKIEHLVTGRVYDVHGSRLKFYADAALNTMEE---LLELVSSQGMLLGVDKFIEHRYNP-ERGRWELLVSWLGLQAIED-SWEPLSTLLQDVP 616          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A225VRY4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VRY4_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 5.420e-15
Identity = 74/282 (26.24%), Postives = 120/282 (42.55%), Query Frame = 0
Query:    1 VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPV--------PVVQVGPK--------------------HGALGWLDNNGDESRVE-----DLDVPHERMKGLVEDWVKSQEAARRKVLQRVRRYTPKLFGTSTGPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIADIVDIGEDPVQEGENMVL-----VEWMGLDAAEERSWEAVSTIHENVP 244
            ++VSD G HF N + S L   L  +  F+ A   W NG++E +NR+++  L+A++ E     R+W+  +P+        PV  +  K                    HG    L    D  ++E     + DV    ++  V+D                 +   KL  T TGP  VV    AH ++V  +VTG   DVHA R++ +AD SL +  +   + E    QG      ++ + E       N +      V W GL+  E+ SWE ++T+ + +P
Sbjct:  419 IWVSDNGSHFKNEVMSELRRRLKTQQQFTPAYCPWINGSIERVNRDILQVLRAMILEYKISTRDWIYLIPMVQSSLNHTPVPSLASKAPVELFTGLPCPSPLQSFYSHGKKEILQIPDDADKIEGENVVNFDVGDYVLRSRVDD-----------------KQGNKLHVTWTGPHIVV-RADAHSFRVRHLVTGDESDVHASRLKFYADNSLNITEE---LLEHVAAQGT-----VLAVNELKEHRWNNTIKDYELRVNWRGLEPIED-SWEPITTLGKEIP 673          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A6A4FSE9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FSE9_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.440e-14
Identity = 78/299 (26.09%), Postives = 140/299 (46.82%), Query Frame = 0
Query:    1 VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPVPVVQVGPKHGALGWLDN--------------------NGDESRVEDL----DVPHERMKGLVEDWV---------KSQEAARRKVLQ-----------------RV-RRYTPKLFGTSTGPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIADIVDIGED----PVQEGENMVLVEWMGLDAAEERSWEAVSTIHENVP 244
            ++ SD G HF N + +++   L +E  FSVA+S W NG++E +NR+VI  LK +  E  + +R+W + VP+  ++    H  L  L N                    + ++ R+ +L    ++  E+++ L E            + ++  R+K +Q                 RV ++Y  KL  T  GP ++      H++ V+ +VTG   DVHA R++ +ADK   V  +V    E    QG   +  + ++ E      ++  E  +LV W GL+  E+ SWE + ++ +++P
Sbjct:  360 IWFSDHGSHFKNEVVAVIGKRLKSEQRFSVAHSPWINGSIERVNRDVIQVLKVLCLEYKKDIRDWTSFVPL--LRASINHTPLPSLGNKAPVELFCALPLPSPLDFCVDAEQKRIVELTKQPELIAEKLQQLRESVQHMHRAVAAERERQTRRKKSMQSGARKANFSVGDFVLRSRVDQKYQDKLLVTWVGPYQIK-RADKHLFVVQHLVTGVETDVHASRLKYYADKDYEVTEEVR---EHIASQGI--VLAVAELKEHRWNASIKSYE--ILVSWQGLEPIED-SWEPLRSLWKDIP 647          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A2P4YHH3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHH3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.840e-14
Identity = 78/261 (29.89%), Postives = 117/261 (44.83%), Query Frame = 0
Query:    1 VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPVPVVQVGPKHGALGWLDNNGDESRVEDLDVP-------HERMKGLVE--DWVKS----------------QEAARRKVLQRV--RRYTPKLFGTSTGPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIADIVDIGEDPVQEGENMVLVEWMGLDAAEERSWE 234
            ++VSD G HF N + + L+  L ++ HF++A S W NG+VE +NR+++  L+A+L E     ++W   VP+  VQ    H AL  L N         L  P       H   K LV   D  ++                Q  A  ++ QR    +   KL  T  GP +VV   S H + +  +V+G   DVHA R++ +AD  L V  ++    E    QG     +            +  VLV W GL++ E+ SWE
Sbjct:  235 MWVSDNGSHFKNEVVAELSRRLKSQQHFTLAYSPWINGSVERVNRDILQVLRAMLLEYKISTKDWTYLVPL--VQASLNHTALPSLGNRAPVELFTGLPCPSPLAEFYHPDSKKLVTLPDTSEAIDKHLAELRASLCAMHQPIADHRLKQRRVDEKKGNKLLVTWQGPYKVVRADS-HSFGISHLVSGDESDVHASRLKFYADSQLNVTEEI---LEHIASQGIVLAVNGFKNHRWNASIKDYEVLVSWKGLESVED-SWE 488          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A225VG15_9STRA (RNA-directed DNA polymerase (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VG15_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.840e-14
Identity = 77/262 (29.39%), Postives = 118/262 (45.04%), Query Frame = 0
Query:    2 YVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPV--------PVVQVGPKHGALGWLDNN--------GDESRVEDLDVPHERMKGLVEDWVKSQEAARRKVLQRVRRYTPKLFGTSTGPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEF-EIADIVD--IGEDPVQEGENMVLVEWMGLDAAEERSWEAVSTIHENVP 244
            ++SD G HF   +  LLA  LG  H F    + W NGTVE +NR+++  L+ +L E+    R W   +P+        PV+ +G       + D+           + R +       R KG V ++ +       +V +R++    KL     GP +VV    AH + +  I+TG   DVH  R++ + D  L V  ++    E    QG   E+ ++VD  I  D    GE  +LV W GL   E  SWE   +I  +VP
Sbjct: 1062 WMSDNGSHFKCQVMELLAERLGVNHQFVPVYTPWINGTVERVNRDILQVLRVMLLESRLDTRNWTHLLPIIQANLNHTPVLSLGNCAPVELFTDDYPSKLESYAAQDRREQQRLAAMARYKGAVCNFSEGDYVLWSRVDKRMQGN--KLLVRWVGPFQVV-KALAHSFLIRHILTGAEYDVHGSRLKFYHDADLEVTAEIR---EHVSLQGIILEVREVVDHRINGDT---GELELLVAWRGLQDIE-NSWEPAHSIQRDVP 1313          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A225VK89_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VK89_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 7.160e-14
Identity = 77/269 (28.62%), Postives = 122/269 (45.35%), Query Frame = 0
Query:    1 VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPVPVVQVGPKHGALGWLDNNGDESRVEDLDVP-------------HERMKGLVE-----------DWVKSQEAARRKVLQRVRRYTPKLFGTSTGPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIAD-IVDIGEDPVQEGENMVLVEWMGLDAAEERSWEAVSTIHENVP 244
            V+VSD+G HF   + + L+  L     F +A S W NG+VE +NR+++  LKA+  E    V +W     +P+VQ    H  +  L N         L  P             H+R     +           ++       R +V +++  +  KL     GP RV+ G + + + VE ++ G T DVH  R++ +AD SL V  +   + +    QG     D IVD  ++   +    V V+W GL+  E+ SWE + TI E+VP
Sbjct: 1240 VWVSDSGSHFKCKVIAELSRRLKGRQDFILAYSPWKNGSVERVNRDILQVLKALALEFQVSVHDW--PYLLPLVQSSINHSPVPSLANRAPVELFTGLPCPSTLDTIFLPGGKGHQRTNQAKKYRNRPHYDRQVNFTVGDYVLRSRVDEKL--HANKLRVMWVGPYRVI-GSTDYYFTVEHLINGSTIDVHPSRLKFYADDSLDVTEE---LLDHIASQGTLLAVDAIVDHRKNADMKAYE-VKVKWQGLEKIED-SWEPLKTISEDVP 1498          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 2.800e-13
Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    1 VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVP 70
            V+VSDT  HF N +   L  ALG E  F+VANS WSNGT E M RE++ T+KAVL E  R VR+W+  VP
Sbjct:  555 VWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVP 624          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE6.590e-3235.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P4XSG7_9STRA4.840e-2028.95Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A2P4WXA7_9STRA3.640e-1727.97Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A225VA87_9STRA1.860e-1630.42Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A225VRY4_9STRA5.420e-1526.24Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A6A4FSE9_9STRA2.440e-1426.09Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A2P4YHH3_9STRA2.840e-1429.89Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A225VG15_9STRA3.840e-1429.39RNA-directed DNA polymerase (Fragment) n=1 Tax=Phy... [more]
A0A225VK89_9STRA7.160e-1428.62Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A6H5JCX8_9PHAE2.800e-1355.71Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..72
e-value: 7.5E-12
score: 46.8
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 198..244
score: 9.535
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..109
score: 9.018
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8108contigH-paniculata_contig8108:5159..6046 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8108.16128.1mRNA_H-paniculata_contig8108.16128.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8108 5159..6046 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8108.16128.1 ID=prot_H-paniculata_contig8108.16128.1|Name=mRNA_H-paniculata_contig8108.16128.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp
VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINT
LKAVLNEANRPVREWLAAVPVPVVQVGPKHGALGWLDNNGDESRVEDLDV
PHERMKGLVEDWVKSQEAARRKVLQRVRRYTPKLFGTSTGPSRVVWGGSA
HVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEI
ADIVDIGEDPVQEGENMVLVEWMGLDAAEERSWEAVSTIHENVP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR000953Chromo/chromo_shadow_dom
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf