mRNA_H-paniculata_contig8108.16128.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8108.16128.1
Unique NamemRNA_H-paniculata_contig8108.16128.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 6.590e-32
Identity = 96/273 (35.16%), Postives = 141/273 (51.65%), Query Frame = 1
Query:    1 VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPVPVVQVG----------PKHGALG---------WLDNNGDESRVEDLDVPHERMKGLVEDWVKSQEAARRKVLQRVRRYTPKLFGTS---------TGPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIADIVDIGEDPVQEGENM-VLVEWMGLDAAEERSWEAVSTIHENVP 732
            V+VSDT  HF NH+ + L  ALG + +FSVANS WSNGT E M REV+ TLKA++ E     R+W+  VP     +           P H   G            + G E +V+ LD    R+K  V+  V++Q    ++VL +V+    K   ++          G   +V     HVY V+ IV+G  +DVH  R+R +AD +L +  ++  +F+ A  QGEFE+A IVD+     ++G    V VEW+G D  EE +WE +S + +  P
Sbjct: 1433 VWVSDTASHFKNHMMAALETALGVDRNFSVANSPWSNGTCERMMREVVRTLKAMIQEERGRTRDWVDLVPAVQWALNTAFRERYGSTPYHVMFGRAPRTALSTLASSTGAEWKVDVLDEKSLRLK--VQHVVEAQRHLHKEVLDKVQASRSKHRASARVGSLPDFVVGDYVIVAAERLHVYGVQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMS--VAEDGPGFDVEVEWVGFDK-EENTWEELSKMWDAAP 1700          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A2P4XSG7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSG7_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 4.840e-20
Identity = 77/266 (28.95%), Postives = 120/266 (45.11%), Query Frame = 1
Query:    4 YVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPVPVVQVGPKHGALGWLDNNGDESRVEDLDVPHERMKGLVEDWVKS---QEAARRKVLQRVRRYTPKLFGTST--------------------GPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIADIVDIGEDPVQEGENMVLVEWMGLDAAEERSWEAVSTIHENVP 732
            +VSD G HF N +   L +ALGA HHF+ A   W+NGTVE +NREV+   +A+L+E      EW   + +  VQ+   H     +D     + +  L   +      V D ++     E  RRK     +  T   F                        GP++V    S  ++++E ++TG  ++VHA R++ +AD SL V  D   +     H  E  + D +       QE  + + V W GL  AE+ SWE  + + ++VP
Sbjct:  189 WVSDQGTHFKNKVIEGLQHALGAHHHFTTARCPWANGTVEVVNREVLRCCRALLSEWRLQSGEWPRVIKI--VQMVLNHSPCSAIDGVAPVTAMTGLKAMNPTDPLAVPDPIQVATLDEIQRRKHHNGKKGTTMAQFDVGDFVLYADVWQHARAKLRVKWCGPAQVTAATSNWIFEIENLITGERREVHASRLKFYADSSLEVTED---LLRHVAHNSEGHVVDSLLAARYNAQEKRHELKVHWRGLAEAED-SWEPAAVLLQDVP 448          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A2P4WXA7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXA7_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 3.640e-17
Identity = 73/261 (27.97%), Postives = 115/261 (44.06%), Query Frame = 1
Query:    1 VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPVPVVQVGPKHGALGWLDNNGDESRVEDLDVPHERMKGLVEDWVKSQEAARRKVLQRVRRYTPKLFGTST------------------GPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIADIVDIGEDPVQEGENMVLVEWMGLDAAEERSWEAVSTIHENV 729
            ++VSD G HF N +   L  ALGA HHF+ A   W+NGTVE + REV+   +A+L+E      EW   + +  VQ+         L+       +  +   +     +      ++  AR K  +R  +      G                     GP+RVV   S  V+ +E ++T  T++VHA R++ FAD  LG+  D+ A      H  E  + + +          ++ +LV+W GL   E  SWE V  + E+V
Sbjct: 1198 LWVSDQGTHFKNAVIQALQRALGAHHHFTTARCPWANGTVEVVMREVLRCCRALLSEWRLAEAEWPRVIKI--VQLVLNQSPSASLEGVAPVRAMTGIAAMNPVDPIITPSGQSARNKARTKSSKRGAKMAQFAIGDYVLYADVWSHRHSKLRVKWCGPARVVDTASNWVFTIENLLTRETREVHASRLKFFADSDLGITEDLLA---HVAHNSEGHVVEEIREARYDNVGKQHQLLVKWRGLGEIE-NSWEPVQNLLEDV 1452          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A225VA87_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VA87_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.860e-16
Identity = 80/263 (30.42%), Postives = 128/263 (48.67%), Query Frame = 1
Query:    7 VSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEA------------------NRPVREWLAAVPVPVVQVGPKHGALGWLDNNGD--ESRVEDLDVPHERMKGLVEDWVKSQEAARRKVLQRVRRYTPKLFGTSTGPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIAD-IVDIGEDPVQEGENMVLVEWMGLDAAEERSWEAVSTIHENVP 732
            +SD G HF N + + LA  L  E  FS   S W NGTVE +NR+V+  L+A+L +A                  + PVR      PV V    P   AL  ++ + +  +S+ +   +  +  KG + ++         ++ QR+  +  KL G   GP +V+   S H +K+E +VTG   DVH  R++ +AD +L    +   + E    QG     D  ++   +P + G   +LV W+GL A E+ SWE +ST+ ++VP
Sbjct:  362 MSDQGSHFRNEMINHLAARLKIEPKFSPVYSPWLNGTVERLNRDVLQVLRALLLDALDSHEWPYLLPAIQANLNHTPVRSLAGHSPVEVFTGLPASSALDVVEMHREVVDSKEKKRLLDMQAHKGALVNFDVGDFVLWSRIDQRLPNH--KLLGQWVGPFKVIEALS-HSFKIEHLVTGRVYDVHGSRLKFYADAALNTMEE---LLELVSSQGMLLGVDKFIEHRYNP-ERGRWELLVSWLGLQAIED-SWEPLSTLLQDVP 616          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A225VRY4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VRY4_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 5.420e-15
Identity = 74/282 (26.24%), Postives = 120/282 (42.55%), Query Frame = 1
Query:    1 VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPV--------PVVQVGPK--------------------HGALGWLDNNGDESRVE-----DLDVPHERMKGLVEDWVKSQEAARRKVLQRVRRYTPKLFGTSTGPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIADIVDIGEDPVQEGENMVL-----VEWMGLDAAEERSWEAVSTIHENVP 732
            ++VSD G HF N + S L   L  +  F+ A   W NG++E +NR+++  L+A++ E     R+W+  +P+        PV  +  K                    HG    L    D  ++E     + DV    ++  V+D                 +   KL  T TGP  VV    AH ++V  +VTG   DVHA R++ +AD SL +  +   + E    QG      ++ + E       N +      V W GL+  E+ SWE ++T+ + +P
Sbjct:  419 IWVSDNGSHFKNEVMSELRRRLKTQQQFTPAYCPWINGSIERVNRDILQVLRAMILEYKISTRDWIYLIPMVQSSLNHTPVPSLASKAPVELFTGLPCPSPLQSFYSHGKKEILQIPDDADKIEGENVVNFDVGDYVLRSRVDD-----------------KQGNKLHVTWTGPHIVV-RADAHSFRVRHLVTGDESDVHASRLKFYADNSLNITEE---LLEHVAAQGT-----VLAVNELKEHRWNNTIKDYELRVNWRGLEPIED-SWEPITTLGKEIP 673          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A6A4FSE9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FSE9_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.440e-14
Identity = 78/299 (26.09%), Postives = 140/299 (46.82%), Query Frame = 1
Query:    1 VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPVPVVQVGPKHGALGWLDN--------------------NGDESRVEDL----DVPHERMKGLVEDWV---------KSQEAARRKVLQ-----------------RV-RRYTPKLFGTSTGPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIADIVDIGED----PVQEGENMVLVEWMGLDAAEERSWEAVSTIHENVP 732
            ++ SD G HF N + +++   L +E  FSVA+S W NG++E +NR+VI  LK +  E  + +R+W + VP+  ++    H  L  L N                    + ++ R+ +L    ++  E+++ L E            + ++  R+K +Q                 RV ++Y  KL  T  GP ++      H++ V+ +VTG   DVHA R++ +ADK   V  +V    E    QG   +  + ++ E      ++  E  +LV W GL+  E+ SWE + ++ +++P
Sbjct:  360 IWFSDHGSHFKNEVVAVIGKRLKSEQRFSVAHSPWINGSIERVNRDVIQVLKVLCLEYKKDIRDWTSFVPL--LRASINHTPLPSLGNKAPVELFCALPLPSPLDFCVDAEQKRIVELTKQPELIAEKLQQLRESVQHMHRAVAAERERQTRRKKSMQSGARKANFSVGDFVLRSRVDQKYQDKLLVTWVGPYQIK-RADKHLFVVQHLVTGVETDVHASRLKYYADKDYEVTEEVR---EHIASQGI--VLAVAELKEHRWNASIKSYE--ILVSWQGLEPIED-SWEPLRSLWKDIP 647          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A2P4YHH3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHH3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.840e-14
Identity = 78/261 (29.89%), Postives = 117/261 (44.83%), Query Frame = 1
Query:    1 VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPVPVVQVGPKHGALGWLDNNGDESRVEDLDVP-------HERMKGLVE--DWVKS----------------QEAARRKVLQRV--RRYTPKLFGTSTGPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIADIVDIGEDPVQEGENMVLVEWMGLDAAEERSWE 702
            ++VSD G HF N + + L+  L ++ HF++A S W NG+VE +NR+++  L+A+L E     ++W   VP+  VQ    H AL  L N         L  P       H   K LV   D  ++                Q  A  ++ QR    +   KL  T  GP +VV   S H + +  +V+G   DVHA R++ +AD  L V  ++    E    QG     +            +  VLV W GL++ E+ SWE
Sbjct:  235 MWVSDNGSHFKNEVVAELSRRLKSQQHFTLAYSPWINGSVERVNRDILQVLRAMLLEYKISTKDWTYLVPL--VQASLNHTALPSLGNRAPVELFTGLPCPSPLAEFYHPDSKKLVTLPDTSEAIDKHLAELRASLCAMHQPIADHRLKQRRVDEKKGNKLLVTWQGPYKVVRADS-HSFGISHLVSGDESDVHASRLKFYADSQLNVTEEI---LEHIASQGIVLAVNGFKNHRWNASIKDYEVLVSWKGLESVED-SWE 488          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A225VG15_9STRA (RNA-directed DNA polymerase (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VG15_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.840e-14
Identity = 77/262 (29.39%), Postives = 118/262 (45.04%), Query Frame = 1
Query:    4 YVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPV--------PVVQVGPKHGALGWLDNN--------GDESRVEDLDVPHERMKGLVEDWVKSQEAARRKVLQRVRRYTPKLFGTSTGPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEF-EIADIVD--IGEDPVQEGENMVLVEWMGLDAAEERSWEAVSTIHENVP 732
            ++SD G HF   +  LLA  LG  H F    + W NGTVE +NR+++  L+ +L E+    R W   +P+        PV+ +G       + D+           + R +       R KG V ++ +       +V +R++    KL     GP +VV    AH + +  I+TG   DVH  R++ + D  L V  ++    E    QG   E+ ++VD  I  D    GE  +LV W GL   E  SWE   +I  +VP
Sbjct: 1062 WMSDNGSHFKCQVMELLAERLGVNHQFVPVYTPWINGTVERVNRDILQVLRVMLLESRLDTRNWTHLLPIIQANLNHTPVLSLGNCAPVELFTDDYPSKLESYAAQDRREQQRLAAMARYKGAVCNFSEGDYVLWSRVDKRMQGN--KLLVRWVGPFQVV-KALAHSFLIRHILTGAEYDVHGSRLKFYHDADLEVTAEIR---EHVSLQGIILEVREVVDHRINGDT---GELELLVAWRGLQDIE-NSWEPAHSIQRDVP 1313          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A225VK89_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VK89_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 7.160e-14
Identity = 77/269 (28.62%), Postives = 122/269 (45.35%), Query Frame = 1
Query:    1 VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVPVPVVQVGPKHGALGWLDNNGDESRVEDLDVP-------------HERMKGLVE-----------DWVKSQEAARRKVLQRVRRYTPKLFGTSTGPSRVVWGGSAHVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEIAD-IVDIGEDPVQEGENMVLVEWMGLDAAEERSWEAVSTIHENVP 732
            V+VSD+G HF   + + L+  L     F +A S W NG+VE +NR+++  LKA+  E    V +W     +P+VQ    H  +  L N         L  P             H+R     +           ++       R +V +++  +  KL     GP RV+ G + + + VE ++ G T DVH  R++ +AD SL V  +   + +    QG     D IVD  ++   +    V V+W GL+  E+ SWE + TI E+VP
Sbjct: 1240 VWVSDSGSHFKCKVIAELSRRLKGRQDFILAYSPWKNGSVERVNRDILQVLKALALEFQVSVHDW--PYLLPLVQSSINHSPVPSLANRAPVELFTGLPCPSTLDTIFLPGGKGHQRTNQAKKYRNRPHYDRQVNFTVGDYVLRSRVDEKL--HANKLRVMWVGPYRVI-GSTDYYFTVEHLINGSTIDVHPSRLKFYADDSLDVTEE---LLDHIASQGTLLAVDAIVDHRKNADMKAYE-VKVKWQGLEKIED-SWEPLKTISEDVP 1498          
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 2.800e-13
Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 1
Query:    1 VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINTLKAVLNEANRPVREWLAAVP 210
            V+VSDT  HF N +   L  ALG E  F+VANS WSNGT E M RE++ T+KAVL E  R VR+W+  VP
Sbjct:  555 VWVSDTATHFKNSVMDTLEKALGVERRFTVANSPWSNGTCERMMREIVRTMKAVLQERRRNVRDWVDLVP 624          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8108.16128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE6.590e-3235.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P4XSG7_9STRA4.840e-2028.95Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A2P4WXA7_9STRA3.640e-1727.97Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A225VA87_9STRA1.860e-1630.42Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A225VRY4_9STRA5.420e-1526.24Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A6A4FSE9_9STRA2.440e-1426.09Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A2P4YHH3_9STRA2.840e-1429.89Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A225VG15_9STRA3.840e-1429.39RNA-directed DNA polymerase (Fragment) n=1 Tax=Phy... [more]
A0A225VK89_9STRA7.160e-1428.62Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A6H5JCX8_9PHAE2.800e-1355.71Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8108contigH-paniculata_contig8108:5159..6046 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score89.4
Seed ortholog evalue2.6e-15
Seed eggNOG ortholog4792.ETI57041
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QEWS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons3
Model size732
Cds size732
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8108.16128.1prot_H-paniculata_contig8108.16128.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8108 5159..6046 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931015.8147686-CDS-H-paniculata_contig8108:5158..54991622931015.8147686-CDS-H-paniculata_contig8108:5158..5499Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8108 5159..5499 -
1691481551.664721-CDS-H-paniculata_contig8108:5158..54991691481551.664721-CDS-H-paniculata_contig8108:5158..5499Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8108 5159..5499 -
1622931015.843551-CDS-H-paniculata_contig8108:5592..57241622931015.843551-CDS-H-paniculata_contig8108:5592..5724Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8108 5593..5724 -
1691481551.6777122-CDS-H-paniculata_contig8108:5592..57241691481551.6777122-CDS-H-paniculata_contig8108:5592..5724Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8108 5593..5724 -
1622931015.8657076-CDS-H-paniculata_contig8108:5787..60461622931015.8657076-CDS-H-paniculata_contig8108:5787..6046Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8108 5788..6046 -
1691481551.687888-CDS-H-paniculata_contig8108:5787..60461691481551.687888-CDS-H-paniculata_contig8108:5787..6046Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8108 5788..6046 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8108.16128.1

>prot_H-paniculata_contig8108.16128.1 ID=prot_H-paniculata_contig8108.16128.1|Name=mRNA_H-paniculata_contig8108.16128.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp
VYVSDTGHHFNNHLFSLLANALGAEHHFSVANSAWSNGTVEWMNREVINT
LKAVLNEANRPVREWLAAVPVPVVQVGPKHGALGWLDNNGDESRVEDLDV
PHERMKGLVEDWVKSQEAARRKVLQRVRRYTPKLFGTSTGPSRVVWGGSA
HVYKVEEIVTGPTKDVHAVRMRPFADKSLGVGMDVWAMFEEAKHQGEFEI
ADIVDIGEDPVQEGENMVLVEWMGLDAAEERSWEAVSTIHENVP
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mRNA from alignment at H-paniculata_contig8108:5159..6046-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8108.16128.1 ID=mRNA_H-paniculata_contig8108.16128.1|Name=mRNA_H-paniculata_contig8108.16128.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=888bp|location=Sequence derived from alignment at H-paniculata_contig8108:5159..6046- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGTACGTCAGCGACACCGGTCACCACTTCAACAACCATCTCTTCAGTCT GCTGGCAAACGCGCTGGGGGCCGAGCACCACTTCTCCGTGGCCAACTCTG CGTGGTCAAACGGCACGGTGGAGTGGATGAACCGTGAGGTGATAAACACT CTTAAAGCCGTGCTGAATGAGGCGAACCGTCCGGTTCGCGAATGGCTGGC GGCGGTGCCGGTGCCGGTGGTCCAGGTGGGCCCTAAACACGGCGCATTGG GATGGTTGGGTATCACCTAGTACCAGCTCATGTTCGGTGGTGCATCGCGC ACCGTGTTCTCGCTCTTCACAGACAACAACGGTGATGAGTCGAGGGTAGA GGACCTTGACGTGCCGCACGAGCGCATGAAGGGTCTGGTCGAGGACTGGG TCAAATCTCAGGAGGCGGCGCGACGCAAAGTGTTGCAGCGCGTTCGGAGA TACAGTGAGCGCAAACGGGAGGCGAATGACGTGGGACACTTGCCGATTTC GTGGTCGGCGACCATGTCCTGACAGCGCGGGTTTGCAAGCTTGGAAGCAC CGAAGCTCTTCGGGACGTCGACCGGCCCATCGCGAGTGGTCTGGGGTGGC TCCGCGCATGTTTATAAGGTCGAAGAAATTGTGACGGGGCCCACCAAGGA CGTGCATGCAGTTCGGATGCGGCCGTTCGCGGACAAATCACTGGGTGTGG GAATGGACGTTTGGGCTATGTTCGAGGAAGCGAAACACCAGGGGGAATTC GAAATCGCTGATATCGTTGACATCGGCGAGGACCCCGTCCAGGAAGGGGA GAACATGGTGCTTGTGGAATGGATGGGGTTGGACGCTGCCGAGGAACGGA GTTGGGAAGCGGTGTCAACCATCCATGAGAATGTTCCG
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Coding sequence (CDS) from alignment at H-paniculata_contig8108:5159..6046-

>mRNA_H-paniculata_contig8108.16128.1 ID=mRNA_H-paniculata_contig8108.16128.1|Name=mRNA_H-paniculata_contig8108.16128.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at H-paniculata_contig8108:5159..6046- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGTACGTCAGCGACACCGGTCACCACTTCAACAACCATCTCTTCAGTCT
GCTGGCAAACGCGCTGGGGGCCGAGCACCACTTCTCCGTGGCCAACTCTG
CGTGGTCAAACGGCACGGTGGAGTGGATGAACCGTGAGGTGATAAACACT
CTTAAAGCCGTGCTGAATGAGGCGAACCGTCCGGTTCGCGAATGGCTGGC
GGCGGTGCCGGTGCCGGTGGTCCAGGTGGGCCCTAAACACGGCGCATTGG
GATGGTTGGGTGTACGTCAGCGACACCGGTCACCACTTCAACAACCATCT
CTTCAGTCTGCTGGCAAACGCGCTGGGGGCCGAGCACCACTTCTCCGTGG
CCAACTCTGCGTGGTCAAACGGCACGGTGGAGTGGATGAACCGTGAGGTG
ATAAACACTCTTAAAGCCGTGCTGAATGAGGCGAACCGTCCGGTTCGCGA
ATGGCTGGCGGCGGTGCCGGTGCCGGTGGTCCAGGTGGGCCCTAAACACG
GCGCATTGGGATGGTTGGACAACAACGGTGATGAGTCGAGGGTAGAGGAC
CTTGACGTGCCGCACGAGCGCATGAAGGGTCTGGTCGAGGACTGGGTCAA
ATCTCAGGAGGCGGCGCGACGCAAAGTGTTGCAGCGCGTTCGGAGATACA
ACAACAACGGTGATGAGTCGAGGGTAGAGGACCTTGACGTGCCGCACGAG
CGCATGAAGGGTCTGGTCGAGGACTGGGTCAAATCTCAGGAGGCGGCGCG
ACGCAAAGTGTTGCAGCGCGTTCGGAGATACACACCGAAGCTCTTCGGGA
CGTCGACCGGCCCATCGCGAGTGGTCTGGGGTGGCTCCGCGCATGTTTAT
AAGGTCGAAGAAATTGTGACGGGGCCCACCAAGGACGTGCATGCAGTTCG
GATGCGGCCGTTCGCGGACAAATCACTGGGTGTGGGAATGGACGTTTGGG
CTATGTTCGAGGAAGCGAAACACCAGGGGGAATTCGAAATCGCTGATATC
GTTGACATCGGCGAGGACCCCGTCCAGGAAGGGGAGAACATGGTGCTTGT
GGAATGGATGGGGTTGGACGCTGCCGAGGAACGGAGTTGGGAAGCGGTGT
CAACCATCCATGAGAATGTTCCGCACCGAAGCTCTTCGGGACGTCGACCG
GCCCATCGCGAGTGGTCTGGGGTGGCTCCGCGCATGTTTATAAGGTCGAA
GAAATTGTGACGGGGCCCACCAAGGACGTGCATGCAGTTCGGATGCGGCC
GTTCGCGGACAAATCACTGGGTGTGGGAATGGACGTTTGGGCTATGTTCG
AGGAAGCGAAACACCAGGGGGAATTCGAAATCGCTGATATCGTTGACATC
GGCGAGGACCCCGTCCAGGAAGGGGAGAACATGGTGCTTGTGGAATGGAT
GGGGTTGGACGCTGCCGAGGAACGGAGTTGGGAAGCGGTGTCAACCATCC
ATGAGAATGTTCCG
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