prot_H-paniculata_contig80834.16095.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig80834.16095.1
Unique Name	prot_H-paniculata_contig80834.16095.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	88

Homology

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BLAST of mRNA_H-paniculata_contig80834.16095.1 vs. uniprot
Match: A0A6H5KFF2_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFF2_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 3.410e-43
Identity = 71/87 (81.61%), Postives = 80/87 (91.95%), Query Frame = 0

Query:    1 QLEITGIGEIIKTTCTGVEMFKKLLDQGQAGDNIGALLRGIKREDVQRGQVLAAPNTVTSHKKFTAEVYVLNKDEGGRHTPFMTNYR 87
            +LEI+GIG ++KTTCTGVEMFKKLLDQGQAGDNIGALLRG+KREDVQRGQV+  PN+V+ HKKF AEVYVL KDEGGRHTPF +NYR
Sbjct:  298 ELEISGIGSVVKTTCTGVEMFKKLLDQGQAGDNIGALLRGLKREDVQRGQVIHKPNSVSVHKKFKAEVYVLTKDEGGRHTPFFSNYR 384

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BLAST of mRNA_H-paniculata_contig80834.16095.1 vs. uniprot
Match: S7TQZ3_9DELT (Elongation factor Tu n=1 Tax=Desulfovibrio sp. X2 TaxID=941449 RepID=S7TQZ3_9DELT)

HSP 1 Score: 146 bits (369), Expect = 3.020e-42
Identity = 65/87 (74.71%), Postives = 79/87 (90.80%), Query Frame = 0

Query:    1 QLEITGIGEIIKTTCTGVEMFKKLLDQGQAGDNIGALLRGIKREDVQRGQVLAAPNTVTSHKKFTAEVYVLNKDEGGRHTPFMTNYR 87
            ++EI GI + +KTTCTGVEMF+K+LDQGQAGDN+GALLRG+KREDV+RGQVLAAP ++T HKKF AEVYVL+K+EGGRHTPF + YR
Sbjct:   89 EVEIVGIHDTVKTTCTGVEMFRKILDQGQAGDNVGALLRGVKREDVERGQVLAAPKSITPHKKFKAEVYVLSKEEGGRHTPFFSGYR 175

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BLAST of mRNA_H-paniculata_contig80834.16095.1 vs. uniprot
Match: A0A6P1ZGA9_9DELT (Elongation factor Tu (Fragment) n=1 Tax=Oceanidesulfovibrio marinus TaxID=370038 RepID=A0A6P1ZGA9_9DELT)

HSP 1 Score: 143 bits (360), Expect = 7.200e-42
Identity = 63/87 (72.41%), Postives = 77/87 (88.51%), Query Frame = 0

Query:    1 QLEITGIGEIIKTTCTGVEMFKKLLDQGQAGDNIGALLRGIKREDVQRGQVLAAPNTVTSHKKFTAEVYVLNKDEGGRHTPFMTNYR 87
            ++EI G+ + +KTTCTGVEMF+K+LDQGQAGDN+G LLRGIKREDV+RGQVLA P T+T H+KF AEVYVL+K+EGGRHTPF + YR
Sbjct:   10 EIEIVGMKDTVKTTCTGVEMFRKILDQGQAGDNVGVLLRGIKREDVERGQVLARPGTITPHRKFKAEVYVLSKEEGGRHTPFFSGYR 96

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BLAST of mRNA_H-paniculata_contig80834.16095.1 vs. uniprot
Match: Q6N0C2_9PROT (Elongation factor Tu n=5 Tax=Rhodospirillaceae TaxID=41295 RepID=Q6N0C2_9PROT)

HSP 1 Score: 149 bits (376), Expect = 1.030e-41
Identity = 67/87 (77.01%), Postives = 78/87 (89.66%), Query Frame = 0

Query:    1 QLEITGIGEIIKTTCTGVEMFKKLLDQGQAGDNIGALLRGIKREDVQRGQVLAAPNTVTSHKKFTAEVYVLNKDEGGRHTPFMTNYR 87
            ++EI GI   +KTTCTGVEMF+KLLDQG+AGDNIGALLRG+KREDV+RGQVLAAP ++T H KFTAE Y+LNK+EGGRHTPF TNYR
Sbjct:  244 EVEIVGIKPTVKTTCTGVEMFRKLLDQGEAGDNIGALLRGVKREDVERGQVLAAPGSITPHTKFTAEAYILNKEEGGRHTPFFTNYR 330

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BLAST of mRNA_H-paniculata_contig80834.16095.1 vs. uniprot
Match: A0A846QMZ3_9DELT (Elongation factor Tu n=2 Tax=Desulfobaculum xiamenense TaxID=995050 RepID=A0A846QMZ3_9DELT)

HSP 1 Score: 144 bits (364), Expect = 1.170e-41
Identity = 65/87 (74.71%), Postives = 78/87 (89.66%), Query Frame = 0

Query:    1 QLEITGIGEIIKTTCTGVEMFKKLLDQGQAGDNIGALLRGIKREDVQRGQVLAAPNTVTSHKKFTAEVYVLNKDEGGRHTPFMTNYR 87
            ++EI GI +  KTTCTGVEMF+KLLDQG+AGDNIGALLRG+KR+DV+RGQVLAAP ++T H+KF AEVYVLNK+EGGRHTPF + YR
Sbjct:   75 EVEIVGIHDTTKTTCTGVEMFRKLLDQGEAGDNIGALLRGVKRDDVERGQVLAAPGSITPHRKFKAEVYVLNKEEGGRHTPFFSGYR 161

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BLAST of mRNA_H-paniculata_contig80834.16095.1 vs. uniprot
Match: A0A365VR13_9PSED (Elongation factor Tu (Fragment) n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A365VR13_9PSED)

HSP 1 Score: 144 bits (362), Expect = 1.830e-41
Identity = 65/87 (74.71%), Postives = 75/87 (86.21%), Query Frame = 0

Query:    1 QLEITGIGEIIKTTCTGVEMFKKLLDQGQAGDNIGALLRGIKREDVQRGQVLAAPNTVTSHKKFTAEVYVLNKDEGGRHTPFMTNYR 87
            +LEI G+ + +KTTCTGVEMF+KLLDQGQAGDN+G LLRG KREDV+RGQVLA P ++T H  FTAEVYVL+KDEGGRHTPF  NYR
Sbjct:   66 ELEIVGLKDTVKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGSITPHTHFTAEVYVLSKDEGGRHTPFFNNYR 152

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BLAST of mRNA_H-paniculata_contig80834.16095.1 vs. uniprot
Match: UPI00048D16BC (EF-Tu/IF-2/RF-3 family GTPase n=1 Tax=Chitinibacter tainanensis TaxID=230667 RepID=UPI00048D16BC)

HSP 1 Score: 142 bits (359), Expect = 2.870e-41
Identity = 65/87 (74.71%), Postives = 77/87 (88.51%), Query Frame = 0

Query:    1 QLEITGIGEIIKTTCTGVEMFKKLLDQGQAGDNIGALLRGIKREDVQRGQVLAAPNTVTSHKKFTAEVYVLNKDEGGRHTPFMTNYR 87
            ++EI GI   IKTTCTGVEMF+KLLDQGQAGDNIGALLRG KRE+VQRGQVL+ P ++T H KFT+E+YVL+K+EGGRHTPF +NYR
Sbjct:   45 EIEIVGIVPTIKTTCTGVEMFRKLLDQGQAGDNIGALLRGTKREEVQRGQVLSKPGSITPHTKFTSEIYVLSKEEGGRHTPFFSNYR 131

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BLAST of mRNA_H-paniculata_contig80834.16095.1 vs. uniprot
Match: X6IVG2_9HYPH (Elongation factor Tu n=3 Tax=unclassified Mesorhizobium TaxID=325217 RepID=X6IVG2_9HYPH)

HSP 1 Score: 142 bits (357), Expect = 3.620e-41
Identity = 67/87 (77.01%), Postives = 72/87 (82.76%), Query Frame = 0

Query:    1 QLEITGIGEIIKTTCTGVEMFKKLLDQGQAGDNIGALLRGIKREDVQRGQVLAAPNTVTSHKKFTAEVYVLNKDEGGRHTPFMTNYR 87
            +LEI GI    KTTCTGVEMF+KLLDQGQAGDNIGALLRG+ RE V+RGQVLA P TV  HKKF AE Y+L KDEGGRHTPF TNYR
Sbjct:   36 ELEIIGIRPTTKTTCTGVEMFRKLLDQGQAGDNIGALLRGVDREGVERGQVLAKPGTVKPHKKFVAEAYILTKDEGGRHTPFFTNYR 122

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BLAST of mRNA_H-paniculata_contig80834.16095.1 vs. uniprot
Match: A0A522WUV7_9PROT (Elongation factor Tu (Fragment) n=4 Tax=Rhodospirillaceae TaxID=41295 RepID=A0A522WUV7_9PROT)

HSP 1 Score: 145 bits (367), Expect = 3.950e-41
Identity = 66/87 (75.86%), Postives = 76/87 (87.36%), Query Frame = 0

Query:    1 QLEITGIGEIIKTTCTGVEMFKKLLDQGQAGDNIGALLRGIKREDVQRGQVLAAPNTVTSHKKFTAEVYVLNKDEGGRHTPFMTNYR 87
            ++EI GI   +KTTCTGVEMF+KLLDQG+AGDNIGALLRG KREDV+RGQVLAAP ++T H KF AE Y+LNK+EGGRHTPF TNYR
Sbjct:  163 EVEIVGIKNTVKTTCTGVEMFRKLLDQGEAGDNIGALLRGTKREDVERGQVLAAPGSITPHTKFKAEAYILNKEEGGRHTPFFTNYR 249

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BLAST of mRNA_H-paniculata_contig80834.16095.1 vs. uniprot
Match: S9S683_MAGFU (Elongation factor Tu (Fragment) n=1 Tax=Magnetospirillum fulvum MGU-K5 TaxID=1316936 RepID=S9S683_MAGFU)

HSP 1 Score: 144 bits (364), Expect = 6.890e-41
Identity = 66/87 (75.86%), Postives = 75/87 (86.21%), Query Frame = 0

Query:    1 QLEITGIGEIIKTTCTGVEMFKKLLDQGQAGDNIGALLRGIKREDVQRGQVLAAPNTVTSHKKFTAEVYVLNKDEGGRHTPFMTNYR 87
            ++EI GI   +KTTCTGVEMF+KLLDQG+AGDNIGALLRG KREDV+RGQVLAAP T+T H KF AE Y+L K+EGGRHTPF TNYR
Sbjct:  190 EVEIVGIKATVKTTCTGVEMFRKLLDQGEAGDNIGALLRGTKREDVERGQVLAAPGTITPHTKFEAEAYILTKEEGGRHTPFFTNYR 276

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig80834.16095.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig80834.16095.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KFF2_9PHAE	3.410e-43	81.61	Tr-type G domain-containing protein n=2 Tax=Ectoca...	[more]
S7TQZ3_9DELT	3.020e-42	74.71	Elongation factor Tu n=1 Tax=Desulfovibrio sp. X2 ...	[more]
A0A6P1ZGA9_9DELT	7.200e-42	72.41	Elongation factor Tu (Fragment) n=1 Tax=Oceanidesu...	[more]
Q6N0C2_9PROT	1.030e-41	77.01	Elongation factor Tu n=5 Tax=Rhodospirillaceae Tax...	[more]
A0A846QMZ3_9DELT	1.170e-41	74.71	Elongation factor Tu n=2 Tax=Desulfobaculum xiamen...	[more]
A0A365VR13_9PSED	1.830e-41	74.71	Elongation factor Tu (Fragment) n=3 Tax=Proteobact...	[more]
UPI00048D16BC	2.870e-41	74.71	EF-Tu/IF-2/RF-3 family GTPase n=1 Tax=Chitinibacte...	[more]
X6IVG2_9HYPH	3.620e-41	77.01	Elongation factor Tu n=3 Tax=unclassified Mesorhiz...	[more]
A0A522WUV7_9PROT	3.950e-41	75.86	Elongation factor Tu (Fragment) n=4 Tax=Rhodospiri...	[more]
S9S683_MAGFU	6.890e-41	75.86	Elongation factor Tu (Fragment) n=1 Tax=Magnetospi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004161	Translation elongation factor EFTu-like, domain 2	PFAM	PF03144	GTP_EFTU_D2	coord: 11..53 e-value: 1.1E-7 score: 32.1
None	No IPR available	GENE3D	2.40.30.10		coord: 1..58 e-value: 2.1E-16 score: 61.9
None	No IPR available	GENE3D	2.40.30.10		coord: 59..87 e-value: 1.2E-8 score: 37.2
None	No IPR available	PANTHER	PTHR43721	FAMILY NOT NAMED	coord: 2..87
None	No IPR available	PANTHER	PTHR43721:SF22	ELONGATION FACTOR TU, MITOCHONDRIAL	coord: 2..87
IPR004160	Translation elongation factor EFTu/EF1A, C-terminal	PFAM	PF03143	GTP_EFTU_D3	coord: 58..87 e-value: 9.4E-6 score: 25.9
IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	SUPERFAMILY	50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	coord: 58..87
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 4..58

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig80834	contig	H-paniculata_contig80834:151..414 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig80834.16095.1	mRNA_H-paniculata_contig80834.16095.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig80834 151..414 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig80834.16095.1 ID=prot_H-paniculata_contig80834.16095.1|Name=mRNA_H-paniculata_contig80834.16095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=88bp
QLEITGIGEIIKTTCTGVEMFKKLLDQGQAGDNIGALLRGIKREDVQRGQ
VLAAPNTVTSHKKFTAEVYVLNKDEGGRHTPFMTNYR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004161	EFTu-like_2
IPR004160	Transl_elong_EFTu/EF1A_C
IPR009001	Transl_elong_EF1A/Init_IF2_C
IPR009000	Transl_B-barrel_sf