prot_H-paniculata_contig808.16089.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig808.16089.1
Unique Nameprot_H-paniculata_contig808.16089.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length609
Homology
BLAST of mRNA_H-paniculata_contig808.16089.1 vs. uniprot
Match: A0A6H5JFG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG5_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 4.080e-101
Identity = 263/709 (37.09%), Postives = 346/709 (48.80%), Query Frame = 0
Query:   58 VPAVDLYILSDSLTFEAINKRGNAEALPVGRVAVEKLLGVGGKGGSD---VPWVKLHEQRWDDMADDSALLLFPDEDINKASSRVLSFFDNMGTADGRITLEEMIAGFRKIKREWANLKVEEAGRATLQKLVRSMKRAGMSLDTWFRFMDSSQEGRGDDKLSGSELREGFARLSVQIARNECRCYMHRCNRVSYYGSPPRAEE------DTF--TNPTADN--------------IERIEQQ-------------------------------PTEEKGFKSTNSAVITV--PTSDKI------------------------QQWEANSISVPTTKAADE----------------------YGTSTNV-----------------GGGDFF---------------------NKRETRG------ESD-----TKEQRAIHDKQSDGA-EQCREVLGSRVSGMP-RVRRTAGGADTAVKLLACSEHALNGMVYLGPRGRLAASEDTTFSARDINDLMRFIDTDANFNLDMNEIRLAISRLNVESPSASSPAREAGSLLRLLERYMHTTGLRFTDLFYSIDR--NKNGFIEVEELRSIFAKISREPARLRERARVKAEQXXXXXXXXXXXXFQGQQAFERMEMCKKAGVYAILKKIEGWQTRCGRRLSDAFNGGGGERKGRNYGLDADELATVLSNLDLNFTLIEAMTV 609
            +P VD YI  +S+T+ AI KRG ++ALP+ +VA    LG+G  GG     V +V       +   D SALL F DEDI+K    +L FFDN G  D ++TLEEMI+GFRKI+R+WA +K E AGR  L K+VR M+RAGMSL+ WF+FMD SQ G GD KL+  ELR GF RL+  IAR EC C   +CNR+  YG PP          D F   N T+ N              +ER  +Q                               PT+     S +    T+   TS  I                        QQ E+  +      AA                        YG S +V                 GGG                           E  G      ESD      KE  +   +Q  GA  Q   +   +  G+  R R ++     A + +AC EHAL+GMVYLG R      E+ TF+++D++DLMRFIDTD +F+LD+ E+RLAISRL+ +     +   EAG+LL++LE YMH TG RFTD+F+ +DR  N++G+IE  ELR +F  +SREPAR + RAR KAE              +   A ER+E  KKAGVY++LK+IE WQTR G+RLS++F G  G+  G N+GLD DELA  + NLD   +  EAM V
Sbjct:    1 MPTVDQYIFEESITYGAIRKRGQSKALPL-KVASRGALGIGQPGGDSSKGVAFVGAGGNYTESYVDPSALL-FADEDIDK----LLKFFDNAGRGDDKVTLEEMISGFRKIRRKWATVKAERAGRVVLAKVVRLMRRAGMSLEEWFKFMDISQNGHGDGKLTALELRVGFERLATHIARRECCCRAFKCNRIPNYGLPPLTGPQIDPAGDGFETANGTSINCRSSSSGVAKDLSIVERTGKQENSSSHAQDHGHQAPSDRGKHHHHEGFEETDPTQHNHSSSHHQGCTTINRDTSSSITPDGIPDPTEEPEPKRAGGEGERGQQEESKPLGGSAQGAASGGSLGSAFPMGHHRSQGARGASLYGDSGSVDARRLSQGMNVLPGNRCGGGVXXXXXXXXXXXXXXXXXXXTIARRSEEEPGHEIDHCESDLVPMGAKEGPSAGQEQWCGAGNQAGPIENYKEEGVKSRTRTSSIDMLNAGRAVACREHALDGMVYLGQRAYFLGLENETFTSKDVSDLMRFIDTDVDFSLDIREMRLAISRLHADEDEDDARTSEAGNLLQVLESYMHRTGARFTDVFFCLDRRVNRSGYIEKHELRMLFEALSREPARRKARARAKAELAEERARQQELRTAEAHDALERLEKYKKAGVYSVLKRIEVWQTRTGKRLSESFRGSTGDGAG-NHGLDVDELAAFMRNLDFELSPAEAMLV 702          
BLAST of mRNA_H-paniculata_contig808.16089.1 vs. uniprot
Match: D8LCN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN4_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 9.830e-86
Identity = 213/593 (35.92%), Postives = 288/593 (48.57%), Query Frame = 0
Query:   58 VPAVDLYILSDSLTFEAINKRGNAEALPVGRVAVEKLLGVGGKGGSDVPWVKLHEQRWDDMAD--DSALLLFPDEDINKASSRVLSFFDNMGTADGRITLEEMIAGFRKIKREWANLKVEEAGRATLQKLVRSMKRAGMSLDTWFRFMDSSQEG-------------RGDDKLSGSELREGFARLSVQIARNECRCYMHRCNRVSYYGSPPRAEEDTFT--------NPTADNIE------------------RIEQQPTEEKGFKSTNSAVITVPTSDKIQQWEANSISVPTTKAADEYGTSTNVGGGDFFNKRETRGESDTKEQRAIHDKQSDGAEQCREVLGSRVSGMPRVRRTAGGADTAVKLLACSEHALNGMVYLGPRGRLAASEDTTFSARDINDLMRFIDTDANFNLDMNEIRLAISRLNVESPSASSPAREAGSLLRLLERYMHTTGLRFTDLFYSIDRNKNGFIEVEELRSIFAKISREPARLRERARVKAEQXXXXXXXXXXXXFQGQQAFERMEMCKKAGVYAILKKIEGWQTRCGRRLSDAFNGGGGERKGRNYGLDADELATVLSNLDLNFTLIEAMTV 609
            +P VD YI  D +T+ AI KRG+++ALP+  +A    LG+G  GG     +       DD     D + LLF DEDI+K    +L FFD  G  D ++TLEEMI+GFRKI+R+WA +K E AGR  L K+VR M+RAGMSL+ WF+FMD+SQE              +G+ K  G   +   +  S+  A           +  S YG     +    +        +P    I+                   I  +  EE G++        VPT  K +             A  E    T+   G   N +E   ES                               R R ++     A + +AC EHAL+GMVYLG R      E  TF+++D++DLMRFIDTD +F+LD+ E+RLAISRL+ +     +   EAG+LL++LE YMH TG RFTD+F+ +DR                    EPAR + RAR KAE              +   A ER+EM KKAGVYA+LK+IE WQTR G+ LS++F G  G+  G N+GLD DELA  + NLD   +  EAM V
Sbjct:    1 MPTVDQYIFEDGITYGAITKRGHSKALPL-NIASGGALGIGQPGGDSSKGIAFVGAGGDDTESYVDPSALLFADEDIDK----LLKFFDKAGRGDDKVTLEEMISGFRKIRRKWATVKAERAGRVVLAKVVRLMRRAGMSLEEWFKFMDTSQEPDPRHAGGGGERGQQGESKPLGGSAQGDVSGGSLGSAVPMGHHQPEGTHGASLYGDNGSVDARRLSRVMNVLSGSPCGGGIDGXXXXXXXXXXXXXXXSNTIVTRSDEEPGYEIDRCESDLVPTGAKERP-----------SAGQEQWCGTDNQAGHIENNKEEGAES-------------------------------RTRASSIDVLNAGRAIACREHALDGMVYLGQRAYFLGLESETFTSKDVSDLMRFIDTDVDFSLDIREMRLAISRLHADEDEDDARTSEAGNLLQVLESYMHRTGARFTDVFFFLDR--------------------EPARRKARARAKAELAEERIRQKELRTAEAHDASERLEMYKKAGVYAVLKRIEVWQTRTGKHLSESFRGSTGDGTG-NHGLDVDELAAFMRNLDFELSPAEAMLV 525          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig808.16089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JFG5_9PHAE4.080e-10137.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCN4_ECTSI9.830e-8635.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 510..530
NoneNo IPR availableGENE3D1.10.238.10coord: 388..543
e-value: 4.4E-8
score: 35.1
IPR002048EF-hand domainSMARTSM00054efh_1coord: 138..165
e-value: 160.0
score: 0.1
coord: 474..502
e-value: 0.039
score: 23.1
coord: 415..443
e-value: 12.0
score: 9.1
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 411..446
score: 6.619
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 150..168
score: 6.954
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 470..505
score: 10.608
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 483..495
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 410..502

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig808contigH-paniculata_contig808:24826..31327 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig808.16089.1mRNA_H-paniculata_contig808.16089.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig808 24826..31327 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig808.16089.1 ID=prot_H-paniculata_contig808.16089.1|Name=mRNA_H-paniculata_contig808.16089.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=609bp
GNPHDLSVWSDSYPSCSIPTLSGKSCPAIAPLSSANNLEPSPQQFSSTGL
FEALTPQVPAVDLYILSDSLTFEAINKRGNAEALPVGRVAVEKLLGVGGK
GGSDVPWVKLHEQRWDDMADDSALLLFPDEDINKASSRVLSFFDNMGTAD
GRITLEEMIAGFRKIKREWANLKVEEAGRATLQKLVRSMKRAGMSLDTWF
RFMDSSQEGRGDDKLSGSELREGFARLSVQIARNECRCYMHRCNRVSYYG
SPPRAEEDTFTNPTADNIERIEQQPTEEKGFKSTNSAVITVPTSDKIQQW
EANSISVPTTKAADEYGTSTNVGGGDFFNKRETRGESDTKEQRAIHDKQS
DGAEQCREVLGSRVSGMPRVRRTAGGADTAVKLLACSEHALNGMVYLGPR
GRLAASEDTTFSARDINDLMRFIDTDANFNLDMNEIRLAISRLNVESPSA
SSPAREAGSLLRLLERYMHTTGLRFTDLFYSIDRNKNGFIEVEELRSIFA
KISREPARLRERARVKAEQSRERLRQQEEREFQGQQAFERMEMCKKAGVY
AILKKIEGWQTRCGRRLSDAFNGGGGERKGRNYGLDADELATVLSNLDLN
FTLIEAMTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair