prot_H-paniculata_contig808.16086.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig808.16086.1
Unique Nameprot_H-paniculata_contig808.16086.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length103
Homology
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BLAST of mRNA_H-paniculata_contig808.16086.1 vs. uniprot
Match: D8LCN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN5_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 4.470e-5
Identity = 36/97 (37.11%), Postives = 43/97 (44.33%), Query Frame = 0 
Query:    3 KVDKDKGGTIDEAELRQFLKLGQRKETSGAVNIKWARQQRAELAQRERMKERNEYRRKAIQAKDRLAQSRITGAYDVLKSLKHFTKTTGLRVSDLIQ 99
            +VDKDKGGTID  ELR+FLKLG++ ET                                             G   +L SLK FTKT GLR+SD+IQ
Sbjct:  730 RVDKDKGGTIDGEELREFLKLGRKTET---------------------------------------------GVNRMLDSLKTFTKTKGLRLSDMIQ 781
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig808.16086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCN5_ECTSI4.470e-537.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 5..17
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 1..27
score: 10.748

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig808contigH-paniculata_contig808:11733..14441 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig808.16086.1mRNA_H-paniculata_contig808.16086.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig808 11733..15513 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig808.16086.1 ID=prot_H-paniculata_contig808.16086.1|Name=mRNA_H-paniculata_contig808.16086.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
MSKVDKDKGGTIDEAELRQFLKLGQRKETSGAVNIKWARQQRAELAQRER
MKERNEYRRKAIQAKDRLAQSRITGAYDVLKSLKHFTKTTGLRVSDLIQV
EL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom