prot_H-paniculata_contig8077.16082.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8077.16082.1
Unique Nameprot_H-paniculata_contig8077.16082.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length134
Homology
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BLAST of mRNA_H-paniculata_contig8077.16082.1 vs. uniprot
Match: A0A6H5L256_9PHAE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L256_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 8.640e-15
Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 0 
Query:   60 VVSRLEAEIAEYDKAPAIVSHQS-DLLQYWSDAAKPRLDSGRNMLEKPRFPLLSMLARVFHSVDSTSCESERDFS 133
            V  R++ E+ EY K PA V  +  D+L +W DA  PRLD   N++   +FP+LSMLARV+  +DSTSC+SER+FS
Sbjct:  152 VTDRVQKEVDEYTKLPAAVPAKDYDVLGFWRDAGSPRLDPHGNVVSAAQFPILSMLARVYLCIDSTSCQSEREFS 226
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BLAST of mRNA_H-paniculata_contig8077.16082.1 vs. uniprot
Match: A0A6H5L902_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L902_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.330e-14
Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 0 
Query:   60 VVSRLEAEIAEYDKAPAIVSHQS-DLLQYWSDAAKPRLDSGRNMLEKPRFPLLSMLARVFHSVDSTSCESERDFS 133
            V  R++ E+ EY K PA V  +  D+L +W DA  PRLD   N++   +FP+LSMLARV+  +DSTSC+SER+FS
Sbjct:  154 VTDRVQKEVDEYTKLPAAVPAKDYDVLGFWRDAGSPRLDPHGNVVSAAQFPILSMLARVYLCIDSTSCQSEREFS 228
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BLAST of mRNA_H-paniculata_contig8077.16082.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 9.300e-6
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 0 
Query:   56 RRSGVVSR-LEAEIAEYDKAPAIVSHQSDLLQYWSDAAKPRLDSGRNMLEKPRFPLLSMLARVFHSVDSTSCESERDFS 133
            RR  +V R L   +AE    PA   +   LL++W   +KPR  +    +E P  P L+++AR+FH ++STSC++ER+FS
Sbjct:  362 RRGAIVERELRMYLAE---DPAEEEYDFSLLEFWQRRSKPRTCAETGEVE-PGLPHLALIARLFHGIESTSCQAERNFS 436
[Close]
BLAST of mRNA_H-paniculata_contig8077.16082.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 9.920e-6
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 0 
Query:   56 RRSGVVSR-LEAEIAEYDKAPAIVSHQSDLLQYWSDAAKPRLDSGRNMLEKPRFPLLSMLARVFHSVDSTSCESERDFS 133
            RR  +V R L   +AE    PA   +   LL++W   +KPR  +    +E P  P L+++AR+FH ++STSC++ER+FS
Sbjct:  690 RRGAIVERELRMYLAE---DPAEEEYDFSLLEFWQRRSKPRTCAETGEVE-PGLPHLALIARLFHGIESTSCQAERNFS 764
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8077.16082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L256_9PHAE8.640e-1550.67Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]
A0A6H5L902_9PHAE1.330e-1450.67Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]
A0A6H5KAN7_9PHAE9.300e-639.24Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KJ52_9PHAE9.920e-639.24Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 25..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8077contigH-paniculata_contig8077:2569..2970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8077.16082.1mRNA_H-paniculata_contig8077.16082.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8077 1394..3344 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8077.16082.1 ID=prot_H-paniculata_contig8077.16082.1|Name=mRNA_H-paniculata_contig8077.16082.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp
MKPGDPPARQLPPLLQPAKMAGKLPANLPRQSVRRVYSRGTRVHESRKQQ
RRLPRRRSGVVSRLEAEIAEYDKAPAIVSHQSDLLQYWSDAAKPRLDSGR
NMLEKPRFPLLSMLARVFHSVDSTSCESERDFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf