prot_H-paniculata_contig80723.16081.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig80723.16081.1
Unique Nameprot_H-paniculata_contig80723.16081.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length75
Homology
BLAST of mRNA_H-paniculata_contig80723.16081.1 vs. uniprot
Match: A0A6H5K1V1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V1_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.090e-10
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 0
Query:    1 MKLPEGCRDRSGRIVRLNKAIYGLKKAGRMWSNASYKYSWINRYGAPKSDPCVFRLEKRGVVDMIICANVDDVI 74
            +KLP GC D+S +I +  +AIYGLK++GR W   +      N +   K+DPCVFR     VV MII  +VDD++
Sbjct:  435 LKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIHVDDIL 508          
BLAST of mRNA_H-paniculata_contig80723.16081.1 vs. uniprot
Match: A0A6H5K2J9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J9_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.530e-10
Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    1 MKLPEGCRDRSGRIVRLNKAIYGLKKAGRMWSNASYKYSWINRYGAPKSDPCVFRLEKRGVVDMIICANVDDVI 74
            +KLP GC D+S +I +  ++IYGLK++GR W   +      N +   K+DPCVFR     VV MII   VDD++
Sbjct:   32 LKLPAGCGDKSHKIAKAERSIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDIL 105          
BLAST of mRNA_H-paniculata_contig80723.16081.1 vs. uniprot
Match: A0A6H5KLY3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY3_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.770e-10
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 0
Query:    1 MKLPEGCRDRSGRIVRLNKAIYGLKKAGRMWSNASYKYSWINRYGAPKSDPCVFRLEKRGVVDMIICANVDDVI 74
            ++LP GC D+S +IV+  +AIYGLK++GR W   +      N +   K+DPCVFR     VV MII   VDD++
Sbjct:   32 LRLPAGCGDKSHKIVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDIL 105          
BLAST of mRNA_H-paniculata_contig80723.16081.1 vs. uniprot
Match: A0A6H5JZE6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE6_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.820e-10
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    1 MKLPEGCRDRSGRIVRLNKAIYGLKKAGRMWSNASYKYSWINRYGAPKSDPCVFRLEKRGVVDMIICANVDDVI 74
            +KLP GC D+S +I +  +AIYGLK++GR W   +      N +   K+DPCVFR     VV MII   VDD++
Sbjct:  243 LKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMTDEVVVMIIVIYVDDIL 316          
BLAST of mRNA_H-paniculata_contig80723.16081.1 vs. uniprot
Match: A0A6H5JSV9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV9_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 2.120e-10
Identity = 31/73 (42.47%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    1 MKLPEGCRDRSGRIVRLNKAIYGLKKAGRMWSNASYKYSWINRYGAPKSDPCVFRLEKRGVVDMIICANVDDV 73
            M+LPEGC   SG+IV+LNK++YGL++A R W     K      +    +D CVF L ++G V +I+  +VDD+
Sbjct:   55 MRLPEGCGALSGKIVQLNKSLYGLRQASREWYALLKKCLLALGFEQCMADSCVFSLVEKGEVVLILAVHVDDI 127          
BLAST of mRNA_H-paniculata_contig80723.16081.1 vs. uniprot
Match: A0A6H5K5G1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G1_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 2.590e-10
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    1 MKLPEGCRDRSGRIVRLNKAIYGLKKAGRMWSNASYKYSWINRYGAPKSDPCVFRLEKRGVVDMIICANVDDVI 74
            +KLP GC D+S +I +  +AIYGLK++GR W   +      N +   K+DPCVFR     VV MII   VDD++
Sbjct:  270 LKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDIL 343          
BLAST of mRNA_H-paniculata_contig80723.16081.1 vs. uniprot
Match: A0A6H5KFN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN5_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 2.700e-10
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    1 MKLPEGCRDRSGRIVRLNKAIYGLKKAGRMWSNASYKYSWINRYGAPKSDPCVFRLEKRGVVDMIICANVDDVI 74
            +KLP GC D+S +I +  +AIYGLK++GR W   +      N +   K+DPCVFR     VV MII   VDD++
Sbjct:  165 LKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDIL 238          
BLAST of mRNA_H-paniculata_contig80723.16081.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 2.770e-10
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    1 MKLPEGCRDRSGRIVRLNKAIYGLKKAGRMWSNASYKYSWINRYGAPKSDPCVFRLEKRGVVDMIICANVDDVI 74
            +KLP GC D+S +I +  +AIYGLK++GR W   +      N +   K+DPCVFR     VV MII   VDD++
Sbjct:  456 LKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDIL 529          
BLAST of mRNA_H-paniculata_contig80723.16081.1 vs. uniprot
Match: A0A6H5JU90_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU90_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 2.770e-10
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    1 MKLPEGCRDRSGRIVRLNKAIYGLKKAGRMWSNASYKYSWINRYGAPKSDPCVFRLEKRGVVDMIICANVDDVI 74
            +KLP GC D+S +I +  +AIYGLK++GR W   +      N +   K+DPCVFR     VV MII   VDD++
Sbjct:  526 LKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDIL 599          
BLAST of mRNA_H-paniculata_contig80723.16081.1 vs. uniprot
Match: A0A6H5JVJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ4_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 2.770e-10
Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    1 MKLPEGCRDRSGRIVRLNKAIYGLKKAGRMWSNASYKYSWINRYGAPKSDPCVFRLEKRGVVDMIICANVDDVI 74
            +KLP GC D+S +I +  +AIYGLK++GR W   +      N +   K+DPCVFR     VV MII   VDD++
Sbjct:  629 LKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHATDTLIENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDIL 702          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig80723.16081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1V1_9PHAE1.090e-1044.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2J9_9PHAE1.530e-1043.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KLY3_9PHAE1.770e-1044.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZE6_9PHAE1.820e-1044.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JSV9_9PHAE2.120e-1042.47Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K5G1_9PHAE2.590e-1044.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KFN5_9PHAE2.700e-1044.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQN6_9PHAE2.770e-1044.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JU90_9PHAE2.770e-1044.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JVJ4_9PHAE2.770e-1044.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig80723contigH-paniculata_contig80723:223..447 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig80723.16081.1mRNA_H-paniculata_contig80723.16081.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig80723 1..447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig80723.16081.1 ID=prot_H-paniculata_contig80723.16081.1|Name=mRNA_H-paniculata_contig80723.16081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp
MKLPEGCRDRSGRIVRLNKAIYGLKKAGRMWSNASYKYSWINRYGAPKSD
PCVFRLEKRGVVDMIICANVDDVIF
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