prot_H-paniculata_contig8051.16061.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8051.16061.1
Unique Nameprot_H-paniculata_contig8051.16061.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length311
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8051.16061.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.10.10coord: 144..231
e-value: 2.6E-8
score: 35.3
NoneNo IPR availableGENE3D2.160.10.10coord: 232..311
e-value: 4.0E-8
score: 34.7
NoneNo IPR availablePANTHERPTHR37458:SF4coord: 147..249
coord: 182..308
NoneNo IPR availablePANTHERPTHR37458FAMILY NOT NAMEDcoord: 147..249
coord: 182..308
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 148..305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8051contigH-paniculata_contig8051:833..2197 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8051.16061.1mRNA_H-paniculata_contig8051.16061.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8051 833..2197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8051.16061.1 ID=prot_H-paniculata_contig8051.16061.1|Name=mRNA_H-paniculata_contig8051.16061.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=311bp
QETTPAPAAIAEPATAVPIATAPETSAPVGETIAETPAPVEETTAETPAP
VEDITDETPAPVQETVVETPAPAPTVAAPETEAPEAAEDTPAPATQLSSE
DTPAPTVAADATTPPGQTPSPNAGTLSPAPSELAPSAPTIAPDDALVTLS
PEATLNPGTTLSPGATLNPGATLSPEATLNPGTTLSPGATLSPGATLSPG
VTLSPGATLNPGATLSPGATLSPGTTLSPGATLSPGATLSPGATLSPGTT
LSPGTTLSPGATLSPGATLSPGATLNPGATLSPGATLSPGATLSPGTTLS
PGTTLSPGATL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011004Trimer_LpxA-like_sf