prot_H-paniculata_contig8028.16049.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig8028.16049.1
Unique Name	prot_H-paniculata_contig8028.16049.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	101

Homology

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BLAST of mRNA_H-paniculata_contig8028.16049.1 vs. uniprot
Match: D8LL88_ECTSI (Rab32B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL88_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 9.960e-57
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0

Query:    1 VPTVTCKVLVVGNAKCGKSSIISRFVSNRFSPDYNSTVGADYAMKDVALTDGRLARLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWK 101
            VPTVTCKVLVVGNAKCGKSSIISRFVSNRFS DYNSTVGADYAMKDV+L +GR  RLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWK
Sbjct:  347 VPTVTCKVLVVGNAKCGKSSIISRFVSNRFSSDYNSTVGADYAMKDVSLENGRQVRLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWK 447

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BLAST of mRNA_H-paniculata_contig8028.16049.1 vs. uniprot
Match: A0A836CPW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPW2_9STRA)

HSP 1 Score: 160 bits (404), Expect = 4.900e-44
Identity = 74/100 (74.00%), Postives = 85/100 (85.00%), Query Frame = 0

Query:    2 PTVTCKVLVVGNAKCGKSSIISRFVSNRFSPDYNSTVGADYAMKDVALTDGRLARLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWK 101
            PTVTCKVLVVGNAKCGK+SII R+V  RF+ +Y +TVGADY  KDV   DG   RLQLWDIAGQDRFA+LTRAYFRRA+ AVVVCD+TREGT++A+ RWK
Sbjct:  361 PTVTCKVLVVGNAKCGKTSIIQRYVHGRFTSEYTTTVGADYLKKDVLAPDGTCVRLQLWDIAGQDRFARLTRAYFRRARAAVVVCDITREGTYEAVSRWK 460

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BLAST of mRNA_H-paniculata_contig8028.16049.1 vs. uniprot
Match: W7U2E0_9STRA (Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2E0_9STRA)

HSP 1 Score: 141 bits (355), Expect = 4.800e-38
Identity = 68/101 (67.33%), Postives = 76/101 (75.25%), Query Frame = 0

Query:    1 VPTVTCKVLVVGNAKCGKSSIISRFVSNRFSPDYNSTVGADYAMKDVALTDGRLARLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWK 101
            VP   CK+LVVGNAKCGK+S+I RFV   F   Y STVGADY  +DV L DGR  RLQLWDIAGQDRF  LTR YF RAKG +VVCD+TRE TF+A+  WK
Sbjct:  227 VPVSICKLLVVGNAKCGKTSVIRRFVQGNFKNAYVSTVGADYLKRDVILKDGRPVRLQLWDIAGQDRFVHLTRVYFTRAKGVLVVCDLTREKTFEAVRSWK 327

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BLAST of mRNA_H-paniculata_contig8028.16049.1 vs. uniprot
Match: A0A2D4BRT2_PYTIN (Rab32/38 family GTPase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRT2_PYTIN)

HSP 1 Score: 134 bits (338), Expect = 4.080e-36
Identity = 66/98 (67.35%), Postives = 75/98 (76.53%), Query Frame = 0

Query:    4 VTCKVLVVGNAKCGKSSIISRFVSNRFSPDYNSTVGADYAMKDVALTDGRLARLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWK 101
            V  KVLVVGNA+CGK+S I RFVS  FS +Y ST+GAD+  K V   D     LQLWDIAGQDRFAKLTRAYFR AKGA++VCD+TRE T DA+V WK
Sbjct:  136 VIMKVLVVGNARCGKTSTIRRFVSKDFSDEYVSTIGADFVEKVVDYDDNLRLHLQLWDIAGQDRFAKLTRAYFRDAKGALIVCDITRENTIDAVVTWK 233

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BLAST of mRNA_H-paniculata_contig8028.16049.1 vs. uniprot
Match: K3X7B8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7B8_GLOUD)

HSP 1 Score: 132 bits (333), Expect = 1.990e-35
Identity = 64/99 (64.65%), Postives = 76/99 (76.77%), Query Frame = 0

Query:    3 TVTCKVLVVGNAKCGKSSIISRFVSNRFSPDYNSTVGADYAMKDVALTDGRLARLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWK 101
            TV  KVL+VGNA+CGK+S I +FVS +FS +Y ST+GAD+  K +         LQLWDIAGQDRFAKLTRAYFR AKGA++VCD+TRE T DAIV WK
Sbjct:  123 TVIMKVLIVGNARCGKTSTIRQFVSKQFSENYVSTIGADFVEKIIEYDAQLKISLQLWDIAGQDRFAKLTRAYFREAKGALIVCDITRENTIDAIVNWK 221

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BLAST of mRNA_H-paniculata_contig8028.16049.1 vs. uniprot
Match: A0A662X9X8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9X8_9STRA)

HSP 1 Score: 131 bits (329), Expect = 7.490e-35
Identity = 63/101 (62.38%), Postives = 73/101 (72.28%), Query Frame = 0

Query:    1 VPTVTCKVLVVGNAKCGKSSIISRFVSNRFSPDYNSTVGADYAMKDVALTDGRLARLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWK 101
            V TV  KVL+VGNA+CGK+S I RF  +RF  +Y ST+GAD+  K V   D     LQLWDIAGQDRFAK TR YFR AKGAV+VCD+TR  T DA+V WK
Sbjct:  131 VETVIMKVLIVGNARCGKTSTIRRFTQDRFCEEYVSTIGADFVEKLVEYDDRLTISLQLWDIAGQDRFAKFTRGYFREAKGAVIVCDITRANTIDAVVNWK 231

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BLAST of mRNA_H-paniculata_contig8028.16049.1 vs. uniprot
Match: A0A8K1FMK4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMK4_PYTOL)

HSP 1 Score: 130 bits (326), Expect = 9.370e-35
Identity = 62/95 (65.26%), Postives = 72/95 (75.79%), Query Frame = 0

Query:    7 KVLVVGNAKCGKSSIISRFVSNRFSPDYNSTVGADYAMKDVALTDGRLARLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWK 101
            KVLVVGNA+CGK+S I RFVS +FS  Y ST+GAD+  K +   D     LQLWDIAGQDRFAKLTRAYFR AKGA++VCD+TR  T DA+  WK
Sbjct:   97 KVLVVGNARCGKTSTIRRFVSKQFSDHYVSTIGADFVEKVIDYDDSLRLHLQLWDIAGQDRFAKLTRAYFREAKGALIVCDITRANTIDAVETWK 191

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BLAST of mRNA_H-paniculata_contig8028.16049.1 vs. uniprot
Match: D0NCF8_PHYIT (Rab32/38 family GTPase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NCF8_PHYIT)

HSP 1 Score: 127 bits (318), Expect = 1.450e-34
Identity = 57/95 (60.00%), Postives = 72/95 (75.79%), Query Frame = 0

Query:    7 KVLVVGNAKCGKSSIISRFVSNRFSPDYNSTVGADYAMKDVALTDGRLARLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWK 101
            KVL+VGNA+CGK+S I RF  ++F+ +Y ST+GAD+  K +A  +     LQLWDIAGQDRFAK TR YFR A+GAV+VCD+TR  T DA+V WK
Sbjct:    2 KVLIVGNARCGKTSTIRRFTQDKFNEEYVSTIGADFVEKIIAYDEQLTISLQLWDIAGQDRFAKFTRGYFREARGAVIVCDITRANTIDAVVNWK 96

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BLAST of mRNA_H-paniculata_contig8028.16049.1 vs. uniprot
Match: D0NC70_PHYIT (Rab32/38 family GTPase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NC70_PHYIT)

HSP 1 Score: 125 bits (314), Expect = 5.810e-34
Identity = 57/95 (60.00%), Postives = 71/95 (74.74%), Query Frame = 0

Query:    7 KVLVVGNAKCGKSSIISRFVSNRFSPDYNSTVGADYAMKDVALTDGRLARLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWK 101
            KVL+VGNA+CGK+S I RF  + F+ +Y ST+GAD+  K +A  +     LQLWDIAGQDRFAK TR YFR A+GAV+VCD+TR  T DA+V WK
Sbjct:    2 KVLIVGNARCGKTSTIRRFTQDDFNEEYVSTIGADFVEKIIAYDEQLTISLQLWDIAGQDRFAKFTRGYFREARGAVIVCDITRANTIDAVVNWK 96

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BLAST of mRNA_H-paniculata_contig8028.16049.1 vs. uniprot
Match: A0A5D6Y1Q7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Q7_9STRA)

HSP 1 Score: 129 bits (324), Expect = 6.280e-34
Identity = 63/99 (63.64%), Postives = 74/99 (74.75%), Query Frame = 0

Query:    3 TVTCKVLVVGNAKCGKSSIISRFVSNRFSPDYNSTVGADYAMKDVALTDGRLARLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRWK 101
            TV  KVLVVGNA+CGK+S I +FVS +FS  Y ST+GAD+  K +         LQLWDIAGQDRFAKLTRAYFR AKGA++VCD+TRE T DA+  WK
Sbjct:  152 TVIMKVLVVGNARCGKTSTIRQFVSRQFSESYVSTIGADFVEKVIEYDAQLKISLQLWDIAGQDRFAKLTRAYFRDAKGALIVCDITRENTVDAVTTWK 250

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig8028.16049.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig8028.16049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LL88_ECTSI	9.960e-57	94.06	Rab32B, RAB family GTPase n=2 Tax=Ectocarpus TaxID...	[more]
A0A836CPW2_9STRA	4.900e-44	74.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
W7U2E0_9STRA	4.800e-38	67.33	Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=...	[more]
A0A2D4BRT2_PYTIN	4.080e-36	67.35	Rab32/38 family GTPase, putative n=1 Tax=Pythium i...	[more]
K3X7B8_GLOUD	1.990e-35	64.65	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A662X9X8_9STRA	7.490e-35	62.38	Uncharacterized protein n=2 Tax=Nothophytophthora ...	[more]
A0A8K1FMK4_PYTOL	9.370e-35	65.26	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
D0NCF8_PHYIT	1.450e-34	60.00	Rab32/38 family GTPase, putative n=1 Tax=Phytophth...	[more]
D0NC70_PHYIT	5.810e-34	60.00	Rab32/38 family GTPase, putative n=2 Tax=Phytophth...	[more]
A0A5D6Y1Q7_9STRA	6.280e-34	63.64	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 29..45 score: 30.37 coord: 48..70 score: 37.92 coord: 6..27 score: 34.59
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 6..101 e-value: 7.8E-10 score: 13.1
None	No IPR available	GENE3D	3.40.50.300		coord: 2..101 e-value: 1.9E-32 score: 114.1
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 4..101
None	No IPR available	PANTHER	PTHR24073:SF839	RAS-RELATED PROTEIN RAB-38	coord: 4..101
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..101 score: 17.757
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 5..89 e-value: 7.6E-17 score: 59.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 7..100 e-value: 2.3E-27 score: 95.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..100

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig8028	contig	H-paniculata_contig8028:9874..10666 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig8028.16049.1	mRNA_H-paniculata_contig8028.16049.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig8028 9874..10666 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig8028.16049.1 ID=prot_H-paniculata_contig8028.16049.1|Name=mRNA_H-paniculata_contig8028.16049.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=101bp
VPTVTCKVLVVGNAKCGKSSIISRFVSNRFSPDYNSTVGADYAMKDVALT
DGRLARLQLWDIAGQDRFAKLTRAYFRRAKGAVVVCDVTREGTFDAIVRW
K

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase