prot_H-paniculata_contig8022.16044.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8022.16044.1
Unique Nameprot_H-paniculata_contig8022.16044.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length291
Homology
BLAST of mRNA_H-paniculata_contig8022.16044.1 vs. uniprot
Match: D8LTZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ0_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 1.670e-26
Identity = 101/258 (39.15%), Postives = 121/258 (46.90%), Query Frame = 0
Query:   55 ALRCFSCHACSAGEVLSARMQQCPPTEKFCAAVYRPRVGPTGSSFISVDRGCASSVHAVCLS----EGSIVTANTEDQ---TQTYPQTGTEDTKEGNGAKGSDDNKETAGSLIPSSQLPLPPSTAAATTAASVERH---CCSTDLCNGSTMRWDRGVSGTLEMEGYRHSEEHRRNLMEGTRSSTSGGSRKDYAHA----AGWRERPWGS----GEQEVG--NNSAPREG--GGSRLATVLVIVGTFAQVLWLAGSFLQ 290
            AL+CFSC  CS G  LSA+ QQCPP E FCAAV RPR  P      SVDRGCASS++  C      + S+      ++   T T P  G    +E +G             L P S                       CCSTD CNG               EG R SEEH R+LMEGT     G SR   A      AG R    G+    GE+ V   ++++ R G  GGSR ATVLVIVGTF+QVLWL G  ++
Sbjct:   34 ALQCFSCTDCSVGGALSAQKQQCPPGEAFCAAVSRPRTSPLVYQSSSVDRGCASSLNVACEQLNPPQSSLARKEIAEEAGGTATTPAVGDHGHRESDGQN-----------LRPGSXXXXXXXXXXXXXXXXHHLQPLLCCSTDFCNGLE---------DARREGQRRSEEHLRSLMEGTPRKKVGFSRGSLADGGIVTAGGRGSGVGTAAAVGERMVDGEDDNSARGGCEGGSRFATVLVIVGTFSQVLWLVGRLIE 271          
BLAST of mRNA_H-paniculata_contig8022.16044.1 vs. uniprot
Match: A0A6H5JS55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS55_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 4.010e-25
Identity = 102/270 (37.78%), Postives = 123/270 (45.56%), Query Frame = 0
Query:   55 ALRCFSCHACSAGEVLSARMQQCPPTEKFCAAVYRPRVGPTGSSFISVDRGCASSVHAVCLS----EGSIVTANTEDQ---TQTYPQTGTEDTKEGNG------------AKGSDDNKETAGSLIPSSQLPLPPSTAAATTAASVERHCCSTDLCNGSTMRWDRGVSGTLEMEGYRHSEEHRRNLMEGTRSSTSGGSRKDYAH----AAGWR----------ERPWGSGEQEVGNNSAPREG-GGSRLATVLVIVGTFAQVLWLAGSFLQ 290
            AL+ FSC  CS G  LSA+ QQCPP E FCAAV RPR  P      SVDRGCASS+H  C      + S+   + E++   + T P  G    +E +G            ++ SD   +  G  +     PL                CCSTD+CNG               EG R S EH R LMEG        SR   A     AAG R          E+    GE +   NSA   G GGSR ATVLVIVGTF+QVLWL G  ++
Sbjct:   76 ALQYFSCTDCSVGGALSAQKQQCPPGETFCAAVSRPRTSPLVYQSSSVDRGCASSLHVACEQLNPPQSSLARKDIEEKAGKSATTPAVGDHGHRESDGQNFLPGNSSSRSSRSSDGGSQNDGHHL----QPL---------------MCCSTDICNGLE---------DARREGQRRSGEHLRTLMEGAPRKEVRSSRDSPADGGIVAAGGRGSGVGTAAAVEKRMVDGEDD---NSARGGGVGGSRFATVLVIVGTFSQVLWLVGRLIE 314          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8022.16044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTZ0_ECTSI1.670e-2639.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS55_9PHAE4.010e-2537.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 268..289
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..267
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 290..290
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..49
NoneNo IPR availableSUPERFAMILY57302Snake toxin-likecoord: 53..114
NoneNo IPR availableTMHMMTMhelixcoord: 32..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8022contigH-paniculata_contig8022:2027..4402 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8022.16044.1mRNA_H-paniculata_contig8022.16044.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8022 1102..4659 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8022.16044.1 ID=prot_H-paniculata_contig8022.16044.1|Name=mRNA_H-paniculata_contig8022.16044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=291bp
MDERKNSLFFREMKTITLLGGRSRGQRKRRTALRINIFLGSLMLLGGPFN
NTASALRCFSCHACSAGEVLSARMQQCPPTEKFCAAVYRPRVGPTGSSFI
SVDRGCASSVHAVCLSEGSIVTANTEDQTQTYPQTGTEDTKEGNGAKGSD
DNKETAGSLIPSSQLPLPPSTAAATTAASVERHCCSTDLCNGSTMRWDRG
VSGTLEMEGYRHSEEHRRNLMEGTRSSTSGGSRKDYAHAAGWRERPWGSG
EQEVGNNSAPREGGGSRLATVLVIVGTFAQVLWLAGSFLQ*
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