prot_H-paniculata_contig8012.16040.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8012.16040.1
Unique Nameprot_H-paniculata_contig8012.16040.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length207
Homology
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BLAST of mRNA_H-paniculata_contig8012.16040.1 vs. uniprot
Match: A0A6H5JGF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF5_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 3.410e-28
Identity = 91/222 (40.99%), Postives = 111/222 (50.00%), Query Frame = 0 
Query:    1 MGDSDEEVELQRRALALTAMA--------GAGVTPSGSAGEAWG-----TVPTWARVARLQALQSLALKAPRNKELRAALYNINIAQVLRTLCLELDVTTLLLQSFAFRADPAATPRALACDGRTDIQWLVSQRRKAAAATGRGGARARGAGEGGSVTGAEPATVGAREIAGGRWLSTLQSGFTPPLKGVL-VGVVLPTVAPLFRARAN---RGGGGGDERG 205
            M D  EE ELQRRA+AL  M         G GV   G     +       VP WA+VA+ QALQSLAL+AP +K LR ALY +NIAQVLRTLCLE+D  +LLLQ+ A   D A   RAL C+GR DI+WLV                                   +R  AG RWL  L  G T P  G L +  ++  + PL  + A+   RG GG +E G
Sbjct:  467 MSDWTEETELQRRAVALACMEPPRTERRRGGGVGVRGIVRMPFSYTRGVVVPVWAQVAKAQALQSLALRAPCDKNLRVALYEVNIAQVLRTLCLEVDEASLLLQASAVGEDKAEAARALGCEGRGDIKWLVES------------------------------MASSRGEAGRRWLGWLNDGLTLPFSGTLTLAGLIAVLRPLMASNASGSGRGRGGEEEGG 658
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BLAST of mRNA_H-paniculata_contig8012.16040.1 vs. uniprot
Match: D8LU93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU93_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 3.390e-27
Identity = 90/225 (40.00%), Postives = 110/225 (48.89%), Query Frame = 0 
Query:    1 MGDSDEEVELQRRALALTAM----------AGAGVTPSGSAGEAWG-----TVPTWARVARLQALQSLALKAPRNKELRAALYNINIAQVLRTLCLELDVTTLLLQSFAFRADPAATPRALACDGRTDIQWLVSQRRKAAAATGRGGARARGAGEGGSVTGAEPATVGAREIAGGRWLSTLQSGFTPPLKGVL-VGVVLPTVAPLFRARANRGGGG--GDERGRV 207
            M D  EE ELQRRA+AL  M           G GV   G     +       VP WA+VA+ QALQSLALKAP +K LR ALY +NIAQVLRTLCLE+D  +LLLQ+     D A   RAL C+GR DI+WLV                                   +R  AG RWL  L  G + P  G L +  ++  + PL  + A+  G G  G+E G V
Sbjct:  369 MSDWTEETELQRRAVALACMEPPRTERRRGGGVGVGVGGIIRMPFSYTRGVVVPVWAQVAKAQALQSLALKAPCDKNLRVALYEVNIAQVLRTLCLEVDEASLLLQASVVGEDKAEAARALGCEGRRDIKWLVES------------------------------MASSRGEAGRRWLGWLNDGLSLPFSGTLTLAGLVAVLRPLMTSNASGSGRGRGGEEDGGV 563
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8012.16040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGF5_9PHAE3.410e-2840.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU93_ECTSI3.390e-2740.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8012contigH-paniculata_contig8012:4778..5398 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8012.16040.1mRNA_H-paniculata_contig8012.16040.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8012 4778..6403 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8012.16040.1 ID=prot_H-paniculata_contig8012.16040.1|Name=mRNA_H-paniculata_contig8012.16040.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bp
MGDSDEEVELQRRALALTAMAGAGVTPSGSAGEAWGTVPTWARVARLQAL
QSLALKAPRNKELRAALYNINIAQVLRTLCLELDVTTLLLQSFAFRADPA
ATPRALACDGRTDIQWLVSQRRKAAAATGRGGARARGAGEGGSVTGAEPA
TVGAREIAGGRWLSTLQSGFTPPLKGVLVGVVLPTVAPLFRARANRGGGG
GDERGRV
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