prot_H-paniculata_contig8007.16033.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8007.16033.1
Unique Nameprot_H-paniculata_contig8007.16033.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length107
Homology
BLAST of mRNA_H-paniculata_contig8007.16033.1 vs. uniprot
Match: A0A6H5KLY6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLY6_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 1.360e-45
Identity = 71/100 (71.00%), Postives = 85/100 (85.00%), Query Frame = 0
Query:    1 MDPVLVRFLEKFPNAAAAASASLADVTQLAGPLGLQEKRPVAIIRFSQEYLRMDWTKPQELYWVGKYAADAHKIFIEREWHAVEPNDHALNWWIDWMHGT 100
            MDPVLVRFLEKFP A  AA+AS+ ++T++  PLGLQE+RP+AIIRFSQEYL   WT  +ELYWVGKYAADAHKIFIER+W  V+P+DHALNWW++WM G 
Sbjct:  270 MDPVLVRFLEKFPTADVAAAASVDEMTRVVAPLGLQERRPIAIIRFSQEYLSKAWTNVKELYWVGKYAADAHKIFIERKWREVQPDDHALNWWVEWMRGA 369          
BLAST of mRNA_H-paniculata_contig8007.16033.1 vs. uniprot
Match: UPI0014559E8E (methyl-CpG-binding domain protein 4-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014559E8E)

HSP 1 Score: 98.6 bits (244), Expect = 3.190e-23
Identity = 47/95 (49.47%), Postives = 59/95 (62.11%), Query Frame = 0
Query:    3 PVLVRFLEKFPNAAAAASASLADVTQLAGPLGLQEKRPVAIIRFSQEYLRMDWTKPQELYWVGKYAADAHKIFIEREWHAVEPNDHALNWWIDWM 97
            PVL +F E +PNA     A   D+ +L  PLGL  KR   I+RFS EYL  DWT P EL+ +GKY  D+++IF   EW  VEP DH LN + DW+
Sbjct:  135 PVLWKFFESWPNAEVTRKADWTDMVELLHPLGLHLKRAQMIVRFSDEYLSKDWTYPIELHGIGKYGNDSYRIFCVGEWKEVEPTDHMLNKYHDWL 229          
BLAST of mRNA_H-paniculata_contig8007.16033.1 vs. uniprot
Match: A0A835Z3C1_9STRA (DNA glycosylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3C1_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 8.720e-22
Identity = 42/96 (43.75%), Postives = 62/96 (64.58%), Query Frame = 0
Query:    1 MDPVLVRFLEKFPNAAAAASASLADVTQLAGPLGLQEKRPVAIIRFSQEYLRMDWTKPQELYWVGKYAADAHKIFIEREWHAVEPNDHALNWWIDW 96
            +DPVL +FL+  P   +AA A    +  +  PLGL +KRPVA++RFS+EYL   W   + L+WVG+Y  DA+ IF+ ++W  V P+D  L  ++DW
Sbjct:   35 VDPVLAQFLDTHPTPESAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYLA--WRSGRALHWVGQYGVDAYDIFVLQKWETVTPDDSVLRCYVDW 128          
BLAST of mRNA_H-paniculata_contig8007.16033.1 vs. uniprot
Match: A0A8D2KTC0_VARKO (Uncharacterized protein n=2 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2KTC0_VARKO)

HSP 1 Score: 89.0 bits (219), Expect = 8.470e-21
Identity = 42/95 (44.21%), Postives = 61/95 (64.21%), Query Frame = 0
Query:    3 PVLVRFLEKFPNAAAAASASLADVTQLAGPLGLQEKRPVAIIRFSQEYLRMDWTKPQELYWVGKYAADAHKIFIEREWHAVEPNDHALNWWIDWM 97
            PVL  FL+K+P+   A +A+  ++++L  PLGL E R   II+FS EYL   W  P EL+ +GKY  D+++IF   EW  V+P DH LN + +W+
Sbjct:    4 PVLWEFLKKYPSPTIARTANWKEMSELLKPLGLYELRARTIIKFSDEYLVKQWKYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNVYHNWL 98          
BLAST of mRNA_H-paniculata_contig8007.16033.1 vs. uniprot
Match: UPI0008542810 (methyl-CpG-binding domain protein 4 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI0008542810)

HSP 1 Score: 95.5 bits (236), Expect = 9.780e-21
Identity = 47/104 (45.19%), Postives = 63/104 (60.58%), Query Frame = 0
Query:    3 PVLVRFLEKFPNAAAAASASLADVTQLAGPLGLQEKRPVAIIRFSQEYLRMDWTKPQELYWVGKYAADAHKIFIEREWHAVEPNDHALNWWIDWMHGTNPENVG 106
            PVL  FLEK+PNA  A  A   D+ ++  PLGL E R   I+RFS+EYL   W  P  L+ +GKY  D+++IF   EW  V+P DH LN + DW+   N + +G
Sbjct:  447 PVLWSFLEKYPNAEVARMADWKDMAEILQPLGLYELRAKTIVRFSEEYLTKKWRYPIALHGIGKYGNDSYRIFCVNEWKEVQPEDHKLNKYHDWLW-ENKDKLG 549          
BLAST of mRNA_H-paniculata_contig8007.16033.1 vs. uniprot
Match: UPI001AAC9C4F (methyl-CpG-binding domain protein 4 n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAC9C4F)

HSP 1 Score: 95.1 bits (235), Expect = 1.420e-20
Identity = 47/104 (45.19%), Postives = 63/104 (60.58%), Query Frame = 0
Query:    3 PVLVRFLEKFPNAAAAASASLADVTQLAGPLGLQEKRPVAIIRFSQEYLRMDWTKPQELYWVGKYAADAHKIFIEREWHAVEPNDHALNWWIDWMHGTNPENVG 106
            PVL  FLEK+P A  A +A   D+  +  PLGL E R   I+RFS+EYL   W  P EL+ +GKY  D+++IF   EW  V+P DH LN + DW+   N + +G
Sbjct:  517 PVLWSFLEKYPGAEVARAADWKDMADMLQPLGLYELRAKTIVRFSEEYLAKKWRYPIELHGIGKYGNDSYRIFCVNEWKEVQPEDHKLNNYHDWLW-ENKDRLG 619          
BLAST of mRNA_H-paniculata_contig8007.16033.1 vs. uniprot
Match: R7UZA9_CAPTE (Uncharacterized protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UZA9_CAPTE)

HSP 1 Score: 87.4 bits (215), Expect = 8.860e-20
Identity = 41/95 (43.16%), Postives = 62/95 (65.26%), Query Frame = 0
Query:    3 PVLVRFLEKFPNAAAAASASLADVTQLAGPLGLQEKRPVAIIRFSQEYLRMDWTKPQELYWVGKYAADAHKIFIEREWHAVEPNDHALNWWIDWM 97
            PVL  F + +P+A A  +A+  ++++L  PLGL   R   +IRFS+EYL ++WT P EL+ +GKY  D+++IF   EW  V P+DH LN +  W+
Sbjct:   41 PVLWTFFDLWPSAEATKTANWEEISELLQPLGLHVSRAHTLIRFSEEYLNVNWTYPIELHGIGKYGNDSYRIFCLGEWKQVAPSDHKLNDYHRWL 135          
BLAST of mRNA_H-paniculata_contig8007.16033.1 vs. uniprot
Match: UPI0009A268CF (methyl-CpG-binding domain protein 4 isoform X1 n=2 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A268CF)

HSP 1 Score: 92.4 bits (228), Expect = 1.140e-19
Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 0
Query:    3 PVLVRFLEKFPNAAAAASASLADVTQLAGPLGLQEKRPVAIIRFSQEYLRMDWTKPQELYWVGKYAADAHKIFIEREWHAVEPNDHALNWWIDWMHGTNPENVG 106
            PVL  FLE++P+A  A  A   ++  L  PLGL E R  AII+FS E+L   W  P EL+ +GKY  D+++IF  +EW  V+P DH LN + +W+   N E +G
Sbjct:  412 PVLWDFLERYPSAEVARVADWKEIAALLKPLGLYELRAKAIIKFSDEFLTKQWKYPIELHGIGKYGNDSYRIFCVKEWKEVQPRDHKLNKYWEWLW-ANQETLG 514          
BLAST of mRNA_H-paniculata_contig8007.16033.1 vs. uniprot
Match: Q4RJU6_TETNG ((spotted green pufferfish) hypothetical protein n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4RJU6_TETNG)

HSP 1 Score: 90.1 bits (222), Expect = 1.620e-19
Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 0
Query:    3 PVLVRFLEKFPNAAAAASASLADVTQLAGPLGLQEKRPVAIIRFSQEYLRMDWTKPQELYWVGKYAADAHKIFIEREWHAVEPNDHALNWWIDWM 97
            PVL +F E++P+A A   A    +++L  PLGL E R  A+IRFS+EYL   W  P EL+ +GKY  D+++IF   EW  V P DH LN +  W+
Sbjct:  191 PVLWQFFERYPSAEATRGAEWKPMSELMKPLGLNELRAKALIRFSEEYLTKQWRYPIELHGIGKYGNDSYRIFCLEEWREVTPEDHMLNKYHAWL 285          
BLAST of mRNA_H-paniculata_contig8007.16033.1 vs. uniprot
Match: UPI001EE6221B (uncharacterized protein LOC124277882 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE6221B)

HSP 1 Score: 92.0 bits (227), Expect = 1.780e-19
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 0
Query:    3 PVLVRFLEKFPNAAAAASASLADVTQLAGPLGLQEKRPVAIIRFSQEYLRMDWTKPQELYWVGKYAADAHKIFIEREWHAVEPNDHALNWWIDWM 97
            P+L +F  K+P A AA  A    + +L  PLGL EKR   II+FS EYL ++W+ P EL+ +GKY  D+++IF   EW  V+PNDH LN +  W+
Sbjct:  916 PLLWKFFNKWPTADAARKADPDVIARLMQPLGLHEKRAGTIIKFSDEYLTVNWSYPIELHGIGKYGNDSYRIFCVNEWRQVKPNDHKLNDYHKWL 1010          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8007.16033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLY6_9PHAE1.360e-4571.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI0014559E8E3.190e-2349.47methyl-CpG-binding domain protein 4-like n=1 Tax=A... [more]
A0A835Z3C1_9STRA8.720e-2243.75DNA glycosylase (Fragment) n=1 Tax=Tribonema minus... [more]
A0A8D2KTC0_VARKO8.470e-2144.21Uncharacterized protein n=2 Tax=Varanus komodoensi... [more]
UPI00085428109.780e-2145.19methyl-CpG-binding domain protein 4 n=1 Tax=Nanora... [more]
UPI001AAC9C4F1.420e-2045.19methyl-CpG-binding domain protein 4 n=1 Tax=Rana t... [more]
R7UZA9_CAPTE8.860e-2043.16Uncharacterized protein (Fragment) n=1 Tax=Capitel... [more]
UPI0009A268CF1.140e-1944.23methyl-CpG-binding domain protein 4 isoform X1 n=2... [more]
Q4RJU6_TETNG1.620e-1945.26(spotted green pufferfish) hypothetical protein n=... [more]
UPI001EE6221B1.780e-1946.32uncharacterized protein LOC124277882 n=1 Tax=Halio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.340.30coord: 1..103
e-value: 2.1E-27
score: 97.6
NoneNo IPR availablePANTHERPTHR15074:SF0METHYL-CPG-BINDING DOMAIN PROTEIN 4-LIKE PROTEINcoord: 2..101
NoneNo IPR availablePANTHERPTHR150745-METHYLCYTOSINE G/T MISMATCH-SPECIFIC DNA GLYCOSYLASEcoord: 2..101
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 3..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8007contigH-paniculata_contig8007:5604..6571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8007.16033.1mRNA_H-paniculata_contig8007.16033.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8007 5601..6571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8007.16033.1 ID=prot_H-paniculata_contig8007.16033.1|Name=mRNA_H-paniculata_contig8007.16033.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp
MDPVLVRFLEKFPNAAAAASASLADVTQLAGPLGLQEKRPVAIIRFSQEY
LRMDWTKPQELYWVGKYAADAHKIFIEREWHAVEPNDHALNWWIDWMHGT
NPENVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011257DNA_glycosylase